EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000006354 (Gene tree)
Gene ID: 102009024
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 17025 bases
Position: chrJH721920.1:15090962-15107986
Accession: 102009024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000009106	PPR	PF01535.20	3.3e-16	1	2
ENSCLAP00000009106	PPR	PF01535.20	3.3e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000009235	-	3700	XM_005397942	ENSCLAP00000009106	704 (aa)	XP_005397999	UPI00038F1728

Gene Model

Click here to download ENSCLAG00000006354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006354's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006354	-	100	76.023	ENSG00000248919	ATP5MF-PTCD1	92	76.934	Homo_sapiens
ENSCLAG00000006354	-	100	76.023	ENSG00000106246	PTCD1	98	76.934	Homo_sapiens
ENSCLAG00000006354	-	81	47.396	ENSAPOG00000010679	ptcd1	87	47.222	Acanthochromis_polyacanthus
ENSCLAG00000006354	-	100	79.208	ENSAMEG00000006224	-	91	79.365	Ailuropoda_melanoleuca
ENSCLAG00000006354	-	91	48.012	ENSACIG00000017861	ptcd1	92	47.859	Amphilophus_citrinellus
ENSCLAG00000006354	-	94	45.252	ENSAOCG00000020741	-	85	47.284	Amphiprion_ocellaris
ENSCLAG00000006354	-	84	46.656	ENSAOCG00000022617	ptcd1	86	46.578	Amphiprion_ocellaris
ENSCLAG00000006354	-	94	45.549	ENSAPEG00000022632	ptcd1	87	46.845	Amphiprion_percula
ENSCLAG00000006354	-	87	48.885	ENSATEG00000007016	ptcd1	80	50.169	Anabas_testudineus
ENSCLAG00000006354	-	86	59.706	ENSAPLG00000006862	-	94	59.868	Anas_platyrhynchos
ENSCLAG00000006354	-	100	55.292	ENSACAG00000012871	-	92	55.807	Anolis_carolinensis
ENSCLAG00000006354	-	98	76.190	ENSANAG00000035790	-	100	76.335	Aotus_nancymaae
ENSCLAG00000006354	-	88	47.567	ENSACLG00000002824	ptcd1	84	47.458	Astatotilapia_calliptera
ENSCLAG00000006354	-	86	46.708	ENSAMXG00000037292	ptcd1	93	45.753	Astyanax_mexicanus
ENSCLAG00000006354	-	100	77.163	ENSBTAG00000020440	-	86	77.778	Bos_taurus
ENSCLAG00000006354	-	100	75.706	ENSCJAG00000015815	-	98	76.327	Callithrix_jacchus
ENSCLAG00000006354	-	100	78.076	ENSCAFG00000015055	-	92	78.242	Canis_familiaris
ENSCLAG00000006354	-	100	77.935	ENSCAFG00020014480	-	92	78.098	Canis_lupus_dingo
ENSCLAG00000006354	-	100	76.738	ENSCHIG00000027000	-	97	77.457	Capra_hircus
ENSCLAG00000006354	-	100	78.612	ENSTSYG00000029495	-	97	79.913	Carlito_syrichta
ENSCLAG00000006354	-	93	87.538	ENSCAPG00000014660	-	98	88.253	Cavia_aperea
ENSCLAG00000006354	-	100	88.369	ENSCPOG00000001780	-	98	89.049	Cavia_porcellus
ENSCLAG00000006354	-	100	74.930	ENSCCAG00000034025	-	98	75.680	Cebus_capucinus
ENSCLAG00000006354	-	100	75.634	ENSCATG00000040859	-	98	76.504	Cercocebus_atys
ENSCLAG00000006354	-	91	75.385	ENSCSAG00000017794	-	95	75.846	Chlorocebus_sabaeus
ENSCLAG00000006354	-	89	59.819	ENSCPBG00000020866	-	84	61.208	Chrysemys_picta_bellii
ENSCLAG00000006354	-	83	30.820	ENSCING00000007717	-	91	31.429	Ciona_intestinalis
ENSCLAG00000006354	-	100	75.706	ENSCANG00000023441	-	98	76.724	Colobus_angolensis_palliatus
ENSCLAG00000006354	-	99	75.107	ENSCGRG00001023686	Ptcd1	98	75.648	Cricetulus_griseus_chok1gshd
ENSCLAG00000006354	-	99	75.177	ENSCGRG00000015031	Ptcd1	98	75.718	Cricetulus_griseus_crigri
ENSCLAG00000006354	-	88	46.805	ENSCSEG00000002378	ptcd1	80	48.810	Cynoglossus_semilaevis
ENSCLAG00000006354	-	85	48.026	ENSCVAG00000003621	ptcd1	87	48.328	Cyprinodon_variegatus
ENSCLAG00000006354	-	83	48.822	ENSCVAG00000015826	ptcd1	81	48.562	Cyprinodon_variegatus
ENSCLAG00000006354	-	87	49.199	ENSDARG00000076176	ptcd1	88	49.191	Danio_rerio
ENSCLAG00000006354	-	100	73.944	ENSDNOG00000009957	-	98	75.897	Dasypus_novemcinctus
ENSCLAG00000006354	-	99	77.188	ENSDORG00000000740	Ptcd1	99	77.424	Dipodomys_ordii
ENSCLAG00000006354	-	91	41.477	ENSEBUG00000014515	ptcd1	98	42.568	Eptatretus_burgeri
ENSCLAG00000006354	-	100	79.437	ENSEASG00005002480	-	98	80.631	Equus_asinus_asinus
ENSCLAG00000006354	-	100	80.282	ENSECAG00000016617	-	98	80.918	Equus_caballus
ENSCLAG00000006354	-	99	43.826	ENSELUG00000016517	ptcd1	94	44.803	Esox_lucius
ENSCLAG00000006354	-	100	78.925	ENSFCAG00000015069	-	98	79.798	Felis_catus
ENSCLAG00000006354	-	94	58.260	ENSFALG00000013803	-	92	58.683	Ficedula_albicollis
ENSCLAG00000006354	-	100	84.965	ENSFDAG00000006393	-	98	85.239	Fukomys_damarensis
ENSCLAG00000006354	-	79	46.316	ENSFHEG00000012491	ptcd1	88	47.698	Fundulus_heteroclitus
ENSCLAG00000006354	-	86	46.129	ENSGMOG00000007639	ptcd1	91	47.232	Gadus_morhua
ENSCLAG00000006354	-	87	58.085	ENSGALG00000004711	-	86	58.974	Gallus_gallus
ENSCLAG00000006354	-	84	48.074	ENSGAFG00000013175	ptcd1	82	47.475	Gambusia_affinis
ENSCLAG00000006354	-	85	49.013	ENSGACG00000016607	ptcd1	91	48.214	Gasterosteus_aculeatus
ENSCLAG00000006354	-	82	59.762	ENSGAGG00000021832	-	85	59.898	Gopherus_agassizii
ENSCLAG00000006354	-	99	75.847	ENSGGOG00000015123	-	98	76.791	Gorilla_gorilla
ENSCLAG00000006354	-	88	47.930	ENSHBUG00000018275	ptcd1	84	47.812	Haplochromis_burtoni
ENSCLAG00000006354	-	100	87.535	ENSHGLG00000017621	-	98	87.770	Heterocephalus_glaber_female
ENSCLAG00000006354	-	100	87.535	ENSHGLG00100007218	-	98	87.770	Heterocephalus_glaber_male
ENSCLAG00000006354	-	83	47.029	ENSHCOG00000010784	ptcd1	82	47.279	Hippocampus_comes
ENSCLAG00000006354	-	100	78.310	ENSSTOG00000001682	-	98	78.684	Ictidomys_tridecemlineatus
ENSCLAG00000006354	-	100	76.346	ENSJJAG00000000319	Ptcd1	98	76.479	Jaculus_jaculus
ENSCLAG00000006354	-	84	49.155	ENSKMAG00000008708	ptcd1	80	49.317	Kryptolebias_marmoratus
ENSCLAG00000006354	-	93	45.889	ENSLBEG00000008061	ptcd1	88	45.373	Labrus_bergylta
ENSCLAG00000006354	-	92	55.793	ENSLACG00000011172	ptcd1	84	58.553	Latimeria_chalumnae
ENSCLAG00000006354	-	90	52.417	ENSLOCG00000004833	ptcd1	93	54.620	Lepisosteus_oculatus
ENSCLAG00000006354	-	100	72.293	ENSLAFG00000002588	-	98	73.496	Loxodonta_africana
ENSCLAG00000006354	-	100	75.493	ENSMFAG00000041324	-	98	76.361	Macaca_fascicularis
ENSCLAG00000006354	-	100	75.352	ENSMMUG00000030408	-	98	76.218	Macaca_mulatta
ENSCLAG00000006354	-	100	75.493	ENSMNEG00000043786	-	98	76.361	Macaca_nemestrina
ENSCLAG00000006354	-	100	57.969	ENSMLEG00000031179	-	98	60.402	Mandrillus_leucophaeus
ENSCLAG00000006354	-	95	48.373	ENSMAMG00000007623	ptcd1	91	48.077	Mastacembelus_armatus
ENSCLAG00000006354	-	88	47.567	ENSMZEG00005012722	ptcd1	84	47.458	Maylandia_zebra
ENSCLAG00000006354	-	99	55.927	ENSMGAG00000004211	-	92	56.738	Meleagris_gallopavo
ENSCLAG00000006354	-	100	77.054	ENSMICG00000017428	-	98	78.066	Microcebus_murinus
ENSCLAG00000006354	-	86	47.258	ENSMMOG00000020243	ptcd1	88	48.229	Mola_mola
ENSCLAG00000006354	-	99	59.647	ENSMODG00000001350	-	98	59.862	Monodelphis_domestica
ENSCLAG00000006354	-	95	47.801	ENSMALG00000018442	ptcd1	90	47.507	Monopterus_albus
ENSCLAG00000006354	-	99	75.321	MGP_CAROLIEiJ_G0028011	Ptcd1	99	75.683	Mus_caroli
ENSCLAG00000006354	-	99	75.107	ENSMUSG00000029624	Ptcd1	99	75.469	Mus_musculus
ENSCLAG00000006354	-	99	75.036	MGP_PahariEiJ_G0024580	Ptcd1	99	75.396	Mus_pahari
ENSCLAG00000006354	-	99	74.750	MGP_SPRETEiJ_G0029012	Ptcd1	99	75.971	Mus_spretus
ENSCLAG00000006354	-	100	77.228	ENSMPUG00000016518	-	98	78.066	Mustela_putorius_furo
ENSCLAG00000006354	-	100	80.282	ENSMLUG00000010994	-	92	81.089	Myotis_lucifugus
ENSCLAG00000006354	-	88	48.038	ENSNBRG00000010079	ptcd1	85	48.788	Neolamprologus_brichardi
ENSCLAG00000006354	-	100	79.310	ENSNLEG00000011060	-	98	79.963	Nomascus_leucogenys
ENSCLAG00000006354	-	97	62.108	ENSMEUG00000006930	-	99	61.966	Notamacropus_eugenii
ENSCLAG00000006354	-	90	76.744	ENSOPRG00000013647	-	88	77.990	Ochotona_princeps
ENSCLAG00000006354	-	87	46.880	ENSONIG00000003168	ptcd1	95	47.906	Oreochromis_niloticus
ENSCLAG00000006354	-	81	57.612	ENSOANG00000007728	-	73	57.754	Ornithorhynchus_anatinus
ENSCLAG00000006354	-	99	75.140	ENSOCUG00000010584	-	96	75.464	Oryctolagus_cuniculus
ENSCLAG00000006354	-	86	48.784	ENSORLG00000009275	ptcd1	86	48.784	Oryzias_latipes
ENSCLAG00000006354	-	86	48.701	ENSORLG00020000988	ptcd1	86	48.701	Oryzias_latipes_hni
ENSCLAG00000006354	-	86	48.136	ENSORLG00015010557	ptcd1	86	48.136	Oryzias_latipes_hsok
ENSCLAG00000006354	-	90	47.368	ENSOMEG00000020627	ptcd1	86	48.430	Oryzias_melastigma
ENSCLAG00000006354	-	98	74.892	ENSOGAG00000010877	-	99	74.892	Otolemur_garnettii
ENSCLAG00000006354	-	100	72.419	ENSOARG00000018676	-	98	73.055	Ovis_aries
ENSCLAG00000006354	-	100	76.023	ENSPPAG00000036024	-	98	76.934	Pan_paniscus
ENSCLAG00000006354	-	100	79.320	ENSPPRG00000003478	-	98	80.087	Panthera_pardus
ENSCLAG00000006354	-	100	75.882	ENSPTRG00000019452	-	98	76.791	Pan_troglodytes
ENSCLAG00000006354	-	100	75.775	ENSPANG00000016730	-	98	76.648	Papio_anubis
ENSCLAG00000006354	-	93	50.522	ENSPKIG00000014215	ptcd1	87	53.366	Paramormyrops_kingsleyae
ENSCLAG00000006354	-	85	59.833	ENSPSIG00000011184	-	100	60.233	Pelodiscus_sinensis
ENSCLAG00000006354	-	73	44.530	ENSPMAG00000009667	ptcd1	100	44.530	Petromyzon_marinus
ENSCLAG00000006354	-	99	60.298	ENSPCIG00000024778	-	97	61.134	Phascolarctos_cinereus
ENSCLAG00000006354	-	84	48.099	ENSPFOG00000004458	ptcd1	82	48.409	Poecilia_formosa
ENSCLAG00000006354	-	84	48.667	ENSPLAG00000011051	ptcd1	82	48.744	Poecilia_latipinna
ENSCLAG00000006354	-	84	48.264	ENSPMEG00000020547	ptcd1	82	48.744	Poecilia_mexicana
ENSCLAG00000006354	-	83	48.376	ENSPREG00000000059	ptcd1	82	47.871	Poecilia_reticulata
ENSCLAG00000006354	-	94	77.190	ENSPPYG00000017377	-	98	78.034	Pongo_abelii
ENSCLAG00000006354	-	81	78.873	ENSPCAG00000001852	-	87	78.873	Procavia_capensis
ENSCLAG00000006354	-	100	78.187	ENSPCOG00000018596	-	98	79.365	Propithecus_coquereli
ENSCLAG00000006354	-	67	89.000	ENSPVAG00000007529	-	72	89.000	Pteropus_vampyrus
ENSCLAG00000006354	-	88	47.567	ENSPNYG00000019993	ptcd1	84	47.458	Pundamilia_nyererei
ENSCLAG00000006354	-	88	50.955	ENSPNAG00000014931	ptcd1	92	50.231	Pygocentrus_nattereri
ENSCLAG00000006354	-	99	74.535	ENSRNOG00000000987	Ptcd1	98	75.109	Rattus_norvegicus
ENSCLAG00000006354	-	100	75.847	ENSRBIG00000043393	-	98	76.724	Rhinopithecus_bieti
ENSCLAG00000006354	-	100	75.706	ENSRROG00000036420	-	98	76.580	Rhinopithecus_roxellana
ENSCLAG00000006354	-	100	75.740	ENSSBOG00000024114	-	98	75.645	Saimiri_boliviensis_boliviensis
ENSCLAG00000006354	-	98	58.390	ENSSHAG00000011376	-	98	62.232	Sarcophilus_harrisii
ENSCLAG00000006354	-	88	54.101	ENSSFOG00015007909	ptcd1	84	53.894	Scleropages_formosus
ENSCLAG00000006354	-	87	45.981	ENSSMAG00000000218	ptcd1	93	46.330	Scophthalmus_maximus
ENSCLAG00000006354	-	99	45.148	ENSSDUG00000015671	ptcd1	97	45.376	Seriola_dumerili
ENSCLAG00000006354	-	96	45.809	ENSSLDG00000014261	ptcd1	95	45.974	Seriola_lalandi_dorsalis
ENSCLAG00000006354	-	94	54.046	ENSSPUG00000003540	-	89	55.723	Sphenodon_punctatus
ENSCLAG00000006354	-	88	48.649	ENSSPAG00000011049	ptcd1	84	48.649	Stegastes_partitus
ENSCLAG00000006354	-	92	80.184	ENSSSCG00000007622	-	98	80.769	Sus_scrofa
ENSCLAG00000006354	-	87	60.229	ENSTGUG00000007563	-	98	61.093	Taeniopygia_guttata
ENSCLAG00000006354	-	89	46.400	ENSTRUG00000013471	ptcd1	81	47.571	Takifugu_rubripes
ENSCLAG00000006354	-	85	48.849	ENSTNIG00000008271	ptcd1	83	49.662	Tetraodon_nigroviridis
ENSCLAG00000006354	-	100	75.317	ENSTBEG00000011021	-	98	76.040	Tupaia_belangeri
ENSCLAG00000006354	-	100	75.745	ENSTTRG00000003006	-	98	76.445	Tursiops_truncatus
ENSCLAG00000006354	-	100	79.208	ENSUAMG00000008049	-	98	79.221	Ursus_americanus
ENSCLAG00000006354	-	99	77.983	ENSVVUG00000008836	-	98	78.261	Vulpes_vulpes
ENSCLAG00000006354	-	87	53.496	ENSXETG00000009891	ptcd1	87	53.377	Xenopus_tropicalis
ENSCLAG00000006354	-	84	48.311	ENSXMAG00000015540	ptcd1	82	48.217	Xiphophorus_maculatus