EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000006380 (Gene tree)
Gene ID: 102019424
Gene Symbol: SALL1
Alias: Hsal1|TBS|ZNF794
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 16424 bases
Position: chrJH721893.1:9144748-9161171
Accession: 102019424
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000009159	zf-C2H2	PF00096.26	3.4e-34	1	6
ENSCLAP00000009159	zf-C2H2	PF00096.26	3.4e-34	2	6
ENSCLAP00000009159	zf-C2H2	PF00096.26	3.4e-34	3	6
ENSCLAP00000009159	zf-C2H2	PF00096.26	3.4e-34	4	6
ENSCLAP00000009159	zf-C2H2	PF00096.26	3.4e-34	5	6
ENSCLAP00000009159	zf-C2H2	PF00096.26	3.4e-34	6	6
ENSCLAP00000009159	zf-met	PF12874.7	7.5e-25	1	5
ENSCLAP00000009159	zf-met	PF12874.7	7.5e-25	2	5
ENSCLAP00000009159	zf-met	PF12874.7	7.5e-25	3	5
ENSCLAP00000009159	zf-met	PF12874.7	7.5e-25	4	5
ENSCLAP00000009159	zf-met	PF12874.7	7.5e-25	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000009288	SALL1-201	6249	XM_005388281	ENSCLAP00000009159	1313 (aa)	XP_005388338	UPI00038EA5EC

Gene Model

Click here to download ENSCLAG00000006380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000006380	SALL1	88	63.462	ENSCLAG00000010479	SALL4	100	63.462
ENSCLAG00000006380	SALL1	56	41.818	ENSCLAG00000005392	PRDM5	78	41.818
ENSCLAG00000006380	SALL1	59	59.615	ENSCLAG00000001400	SALL2	77	59.615
ENSCLAG00000006380	SALL1	58	44.643	ENSCLAG00000012556	-	76	44.898
ENSCLAG00000006380	SALL1	98	65.306	ENSCLAG00000007727	SALL3	99	65.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006380	SALL1	100	94.486	ENSG00000103449	SALL1	100	95.015	Homo_sapiens
ENSCLAG00000006380	SALL1	99	68.886	ENSAPOG00000022764	sall1a	99	68.811	Acanthochromis_polyacanthus
ENSCLAG00000006380	SALL1	100	92.770	ENSAMEG00000006817	SALL1	100	93.075	Ailuropoda_melanoleuca
ENSCLAG00000006380	SALL1	100	67.640	ENSACIG00000004231	sall1a	99	67.541	Amphilophus_citrinellus
ENSCLAG00000006380	SALL1	99	68.811	ENSAOCG00000002800	sall1a	99	68.736	Amphiprion_ocellaris
ENSCLAG00000006380	SALL1	100	68.591	ENSAPEG00000010179	sall1a	99	68.736	Amphiprion_percula
ENSCLAG00000006380	SALL1	100	67.884	ENSATEG00000003006	sall1a	100	67.636	Anabas_testudineus
ENSCLAG00000006380	SALL1	100	87.814	ENSAPLG00000003356	SALL1	99	87.957	Anas_platyrhynchos
ENSCLAG00000006380	SALL1	99	82.886	ENSACAG00000014399	SALL1	96	82.642	Anolis_carolinensis
ENSCLAG00000006380	SALL1	100	94.478	ENSANAG00000027238	SALL1	100	94.781	Aotus_nancymaae
ENSCLAG00000006380	SALL1	100	67.636	ENSACLG00000017148	sall1a	99	67.537	Astatotilapia_calliptera
ENSCLAG00000006380	SALL1	99	69.162	ENSAMXG00000018599	sall1a	99	68.792	Astyanax_mexicanus
ENSCLAG00000006380	SALL1	99	51.661	ENSAMXG00000017702	sall1b	99	51.183	Astyanax_mexicanus
ENSCLAG00000006380	SALL1	100	92.249	ENSBTAG00000008544	SALL1	100	92.477	Bos_taurus
ENSCLAG00000006380	SALL1	100	94.554	ENSCJAG00000001740	SALL1	100	94.856	Callithrix_jacchus
ENSCLAG00000006380	SALL1	100	92.069	ENSCAFG00000009755	SALL1	100	92.447	Canis_familiaris
ENSCLAG00000006380	SALL1	100	92.069	ENSCAFG00020002842	SALL1	100	92.447	Canis_lupus_dingo
ENSCLAG00000006380	SALL1	100	91.951	ENSCHIG00000026074	SALL1	100	91.800	Capra_hircus
ENSCLAG00000006380	SALL1	100	95.133	ENSTSYG00000029464	SALL1	100	94.829	Carlito_syrichta
ENSCLAG00000006380	SALL1	98	97.591	ENSCPOG00000006564	SALL1	100	97.591	Cavia_porcellus
ENSCLAG00000006380	SALL1	100	92.273	ENSCCAG00000001639	SALL1	100	92.273	Cebus_capucinus
ENSCLAG00000006380	SALL1	100	95.148	ENSCATG00000004982	SALL1	100	95.603	Cercocebus_atys
ENSCLAG00000006380	SALL1	100	93.641	ENSCSAG00000005319	SALL1	100	94.322	Chlorocebus_sabaeus
ENSCLAG00000006380	SALL1	68	95.257	ENSCHOG00000000800	-	69	95.257	Choloepus_hoffmanni
ENSCLAG00000006380	SALL1	100	87.814	ENSCPBG00000015924	SALL1	99	88.313	Chrysemys_picta_bellii
ENSCLAG00000006380	SALL1	100	95.068	ENSCANG00000036664	SALL1	100	95.599	Colobus_angolensis_palliatus
ENSCLAG00000006380	SALL1	100	91.888	ENSCGRG00001023314	-	100	91.736	Cricetulus_griseus_chok1gshd
ENSCLAG00000006380	SALL1	98	91.725	ENSCGRG00000009496	Sall1	100	91.570	Cricetulus_griseus_crigri
ENSCLAG00000006380	SALL1	100	65.678	ENSCSEG00000009349	sall1a	100	65.975	Cynoglossus_semilaevis
ENSCLAG00000006380	SALL1	90	66.862	ENSCVAG00000020513	sall1a	99	66.527	Cyprinodon_variegatus
ENSCLAG00000006380	SALL1	100	68.293	ENSDARG00000074319	sall1a	99	68.615	Danio_rerio
ENSCLAG00000006380	SALL1	99	47.151	ENSDARG00000075891	sall1b	99	47.001	Danio_rerio
ENSCLAG00000006380	SALL1	100	92.091	ENSDNOG00000016413	SALL1	100	92.852	Dasypus_novemcinctus
ENSCLAG00000006380	SALL1	98	93.007	ENSETEG00000015150	SALL1	100	93.007	Echinops_telfairi
ENSCLAG00000006380	SALL1	99	36.819	ENSEBUG00000008798	SALL1	94	37.720	Eptatretus_burgeri
ENSCLAG00000006380	SALL1	90	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSCLAG00000006380	SALL1	100	94.973	ENSEASG00005014602	SALL1	100	94.973	Equus_asinus_asinus
ENSCLAG00000006380	SALL1	91	92.851	ENSECAG00000011334	SALL1	99	92.851	Equus_caballus
ENSCLAG00000006380	SALL1	98	91.712	ENSEEUG00000002014	SALL1	100	91.712	Erinaceus_europaeus
ENSCLAG00000006380	SALL1	100	65.325	ENSELUG00000006159	sall1a	99	65.530	Esox_lucius
ENSCLAG00000006380	SALL1	99	52.093	ENSELUG00000017774	-	99	50.896	Esox_lucius
ENSCLAG00000006380	SALL1	100	91.648	ENSFCAG00000024654	SALL1	100	91.800	Felis_catus
ENSCLAG00000006380	SALL1	100	87.053	ENSFALG00000000074	SALL1	99	87.119	Ficedula_albicollis
ENSCLAG00000006380	SALL1	100	67.464	ENSFHEG00000012579	sall1a	99	67.141	Fundulus_heteroclitus
ENSCLAG00000006380	SALL1	76	63.462	ENSFHEG00000008424	-	99	61.538	Fundulus_heteroclitus
ENSCLAG00000006380	SALL1	97	41.935	ENSGMOG00000013383	-	92	63.462	Gadus_morhua
ENSCLAG00000006380	SALL1	100	66.667	ENSGMOG00000006103	sall1a	99	66.741	Gadus_morhua
ENSCLAG00000006380	SALL1	99	87.424	ENSGALG00000039238	SALL1	99	87.424	Gallus_gallus
ENSCLAG00000006380	SALL1	100	67.886	ENSGAFG00000009964	sall1a	99	67.788	Gambusia_affinis
ENSCLAG00000006380	SALL1	100	66.518	ENSGACG00000016702	sall1a	100	66.741	Gasterosteus_aculeatus
ENSCLAG00000006380	SALL1	100	87.510	ENSGAGG00000013979	SALL1	99	87.984	Gopherus_agassizii
ENSCLAG00000006380	SALL1	100	94.637	ENSGGOG00000000663	SALL1	100	95.166	Gorilla_gorilla
ENSCLAG00000006380	SALL1	100	67.636	ENSHBUG00000022005	sall1a	99	67.388	Haplochromis_burtoni
ENSCLAG00000006380	SALL1	100	97.106	ENSHGLG00000004288	-	100	97.106	Heterocephalus_glaber_female
ENSCLAG00000006380	SALL1	100	97.106	ENSHGLG00100017496	SALL1	100	97.106	Heterocephalus_glaber_male
ENSCLAG00000006380	SALL1	100	65.973	ENSHCOG00000000974	sall1a	99	66.021	Hippocampus_comes
ENSCLAG00000006380	SALL1	99	69.970	ENSIPUG00000016265	SALL1	99	69.369	Ictalurus_punctatus
ENSCLAG00000006380	SALL1	99	49.364	ENSIPUG00000022928	sall1b	99	48.882	Ictalurus_punctatus
ENSCLAG00000006380	SALL1	100	95.057	ENSSTOG00000020885	SALL1	100	94.753	Ictidomys_tridecemlineatus
ENSCLAG00000006380	SALL1	100	67.336	ENSKMAG00000016681	sall1a	99	67.437	Kryptolebias_marmoratus
ENSCLAG00000006380	SALL1	97	66.692	ENSLBEG00000012207	sall1a	95	66.846	Labrus_bergylta
ENSCLAG00000006380	SALL1	100	78.294	ENSLACG00000003556	SALL1	99	78.659	Latimeria_chalumnae
ENSCLAG00000006380	SALL1	97	40.076	ENSLACG00000014018	-	93	40.965	Latimeria_chalumnae
ENSCLAG00000006380	SALL1	99	73.472	ENSLOCG00000007283	sall1b	99	73.728	Lepisosteus_oculatus
ENSCLAG00000006380	SALL1	98	93.711	ENSLAFG00000015251	SALL1	100	93.711	Loxodonta_africana
ENSCLAG00000006380	SALL1	100	94.785	ENSMFAG00000003298	SALL1	100	95.314	Macaca_fascicularis
ENSCLAG00000006380	SALL1	93	94.535	ENSMMUG00000017200	SALL1	100	95.106	Macaca_mulatta
ENSCLAG00000006380	SALL1	93	94.458	ENSMNEG00000034770	SALL1	100	94.947	Macaca_nemestrina
ENSCLAG00000006380	SALL1	100	95.220	ENSMLEG00000036406	SALL1	100	95.675	Mandrillus_leucophaeus
ENSCLAG00000006380	SALL1	100	68.276	ENSMAMG00000004164	sall1a	100	67.979	Mastacembelus_armatus
ENSCLAG00000006380	SALL1	100	67.636	ENSMZEG00005006479	sall1a	99	67.537	Maylandia_zebra
ENSCLAG00000006380	SALL1	98	87.568	ENSMGAG00000004704	SALL1	99	87.568	Meleagris_gallopavo
ENSCLAG00000006380	SALL1	100	91.331	ENSMAUG00000019093	Sall1	100	91.787	Mesocricetus_auratus
ENSCLAG00000006380	SALL1	100	93.156	ENSMICG00000036486	SALL1	100	93.232	Microcebus_murinus
ENSCLAG00000006380	SALL1	100	67.243	ENSMMOG00000016400	sall1a	100	67.618	Mola_mola
ENSCLAG00000006380	SALL1	100	89.871	ENSMODG00000013114	SALL1	100	90.251	Monodelphis_domestica
ENSCLAG00000006380	SALL1	100	68.263	ENSMALG00000013400	sall1a	100	68.165	Monopterus_albus
ENSCLAG00000006380	SALL1	100	91.005	MGP_CAROLIEiJ_G0031362	Sall1	100	90.930	Mus_caroli
ENSCLAG00000006380	SALL1	100	90.710	ENSMUSG00000031665	Sall1	100	90.710	Mus_musculus
ENSCLAG00000006380	SALL1	100	90.566	MGP_PahariEiJ_G0022961	Sall1	100	90.566	Mus_pahari
ENSCLAG00000006380	SALL1	100	90.937	MGP_SPRETEiJ_G0032480	Sall1	100	90.937	Mus_spretus
ENSCLAG00000006380	SALL1	98	90.860	ENSMPUG00000003265	SALL1	97	90.476	Mustela_putorius_furo
ENSCLAG00000006380	SALL1	98	84.373	ENSMLUG00000015541	SALL1	100	85.758	Myotis_lucifugus
ENSCLAG00000006380	SALL1	100	67.636	ENSNBRG00000009307	sall1a	99	67.537	Neolamprologus_brichardi
ENSCLAG00000006380	SALL1	94	98.333	ENSNLEG00000001008	SALL1	100	98.333	Nomascus_leucogenys
ENSCLAG00000006380	SALL1	100	89.566	ENSMEUG00000012206	SALL1	100	89.566	Notamacropus_eugenii
ENSCLAG00000006380	SALL1	89	92.847	ENSOPRG00000005645	SALL1	74	92.857	Ochotona_princeps
ENSCLAG00000006380	SALL1	100	98.020	ENSODEG00000003685	SALL1	100	98.020	Octodon_degus
ENSCLAG00000006380	SALL1	100	68.042	ENSONIG00000002831	sall1a	99	67.943	Oreochromis_niloticus
ENSCLAG00000006380	SALL1	70	89.057	ENSOANG00000013399	SALL1	91	89.057	Ornithorhynchus_anatinus
ENSCLAG00000006380	SALL1	100	66.815	ENSORLG00000013827	sall1a	97	69.355	Oryzias_latipes
ENSCLAG00000006380	SALL1	100	66.741	ENSORLG00020020570	sall1a	99	67.040	Oryzias_latipes_hni
ENSCLAG00000006380	SALL1	100	66.815	ENSORLG00015018830	sall1a	97	68.776	Oryzias_latipes_hsok
ENSCLAG00000006380	SALL1	100	66.889	ENSOMEG00000016043	sall1a	99	66.965	Oryzias_melastigma
ENSCLAG00000006380	SALL1	100	93.703	ENSOGAG00000027316	SALL1	100	94.158	Otolemur_garnettii
ENSCLAG00000006380	SALL1	100	86.405	ENSOARG00000017583	SALL1	100	86.254	Ovis_aries
ENSCLAG00000006380	SALL1	100	70.114	ENSPPAG00000035136	-	99	72.136	Pan_paniscus
ENSCLAG00000006380	SALL1	99	93.822	ENSPPAG00000035657	SALL1	100	95.146	Pan_paniscus
ENSCLAG00000006380	SALL1	100	91.496	ENSPPRG00000023283	SALL1	100	91.648	Panthera_pardus
ENSCLAG00000006380	SALL1	83	95.238	ENSPTIG00000013539	-	96	95.238	Panthera_tigris_altaica
ENSCLAG00000006380	SALL1	100	94.796	ENSPTRG00000008108	SALL1	100	95.307	Pan_troglodytes
ENSCLAG00000006380	SALL1	96	71.813	ENSPTRG00000045256	-	98	72.727	Pan_troglodytes
ENSCLAG00000006380	SALL1	100	95.296	ENSPANG00000024176	SALL1	100	95.751	Papio_anubis
ENSCLAG00000006380	SALL1	100	65.405	ENSPKIG00000005383	-	99	65.376	Paramormyrops_kingsleyae
ENSCLAG00000006380	SALL1	99	65.890	ENSPKIG00000022251	sall1a	99	65.611	Paramormyrops_kingsleyae
ENSCLAG00000006380	SALL1	100	86.976	ENSPSIG00000008582	SALL1	99	87.043	Pelodiscus_sinensis
ENSCLAG00000006380	SALL1	100	65.778	ENSPMGG00000021788	sall1a	100	65.655	Periophthalmus_magnuspinnatus
ENSCLAG00000006380	SALL1	99	51.495	ENSPMAG00000008148	sall1b	99	51.988	Petromyzon_marinus
ENSCLAG00000006380	SALL1	100	89.947	ENSPCIG00000017840	SALL1	100	89.947	Phascolarctos_cinereus
ENSCLAG00000006380	SALL1	98	67.784	ENSPFOG00000015799	sall1a	96	67.580	Poecilia_formosa
ENSCLAG00000006380	SALL1	100	67.737	ENSPLAG00000022539	sall1a	99	67.537	Poecilia_latipinna
ENSCLAG00000006380	SALL1	100	68.036	ENSPMEG00000020894	sall1a	99	67.713	Poecilia_mexicana
ENSCLAG00000006380	SALL1	100	67.889	ENSPREG00000006802	sall1a	99	67.566	Poecilia_reticulata
ENSCLAG00000006380	SALL1	90	94.732	ENSPPYG00000007345	SALL1	95	94.987	Pongo_abelii
ENSCLAG00000006380	SALL1	85	93.902	ENSPCAG00000008162	SALL1	93	93.902	Procavia_capensis
ENSCLAG00000006380	SALL1	100	93.612	ENSPCOG00000028192	SALL1	100	93.688	Propithecus_coquereli
ENSCLAG00000006380	SALL1	81	91.706	ENSPVAG00000015374	SALL1	100	91.939	Pteropus_vampyrus
ENSCLAG00000006380	SALL1	100	67.711	ENSPNYG00000010865	sall1a	99	67.612	Pundamilia_nyererei
ENSCLAG00000006380	SALL1	99	53.979	ENSPNAG00000007442	sall1b	99	53.144	Pygocentrus_nattereri
ENSCLAG00000006380	SALL1	98	63.462	ENSPNAG00000028248	-	68	65.306	Pygocentrus_nattereri
ENSCLAG00000006380	SALL1	99	67.040	ENSPNAG00000023644	sall1a	99	66.467	Pygocentrus_nattereri
ENSCLAG00000006380	SALL1	100	90.516	ENSRNOG00000013907	Sall1	100	90.895	Rattus_norvegicus
ENSCLAG00000006380	SALL1	93	94.281	ENSRBIG00000015707	SALL1	100	95.098	Rhinopithecus_bieti
ENSCLAG00000006380	SALL1	99	93.888	ENSRROG00000035777	SALL1	100	95.020	Rhinopithecus_roxellana
ENSCLAG00000006380	SALL1	100	94.407	ENSSBOG00000032186	SALL1	100	94.860	Saimiri_boliviensis_boliviensis
ENSCLAG00000006380	SALL1	100	88.880	ENSSHAG00000009477	SALL1	100	88.830	Sarcophilus_harrisii
ENSCLAG00000006380	SALL1	98	67.636	ENSSFOG00015001590	sall1a	99	67.586	Scleropages_formosus
ENSCLAG00000006380	SALL1	99	67.117	ENSSFOG00015020020	sall1a	99	66.992	Scleropages_formosus
ENSCLAG00000006380	SALL1	100	67.908	ENSSMAG00000009160	sall1a	100	67.809	Scophthalmus_maximus
ENSCLAG00000006380	SALL1	100	68.354	ENSSDUG00000006507	sall1a	100	68.331	Seriola_dumerili
ENSCLAG00000006380	SALL1	90	59.184	ENSSDUG00000000748	sall1b	84	59.184	Seriola_dumerili
ENSCLAG00000006380	SALL1	100	68.429	ENSSLDG00000017721	sall1a	100	68.405	Seriola_lalandi_dorsalis
ENSCLAG00000006380	SALL1	54	72.340	ENSSLDG00000014465	-	87	72.340	Seriola_lalandi_dorsalis
ENSCLAG00000006380	SALL1	98	91.867	ENSSARG00000000661	SALL1	100	91.867	Sorex_araneus
ENSCLAG00000006380	SALL1	100	86.748	ENSSPUG00000000156	SALL1	99	86.814	Sphenodon_punctatus
ENSCLAG00000006380	SALL1	99	68.834	ENSSPAG00000021615	sall1a	99	68.834	Stegastes_partitus
ENSCLAG00000006380	SALL1	100	91.629	ENSSSCG00000002836	SALL1	100	91.554	Sus_scrofa
ENSCLAG00000006380	SALL1	100	87.129	ENSTGUG00000007514	SALL1	99	87.195	Taeniopygia_guttata
ENSCLAG00000006380	SALL1	91	65.828	ENSTRUG00000008950	sall1a	100	66.234	Takifugu_rubripes
ENSCLAG00000006380	SALL1	92	65.313	ENSTNIG00000004257	sall1a	100	65.469	Tetraodon_nigroviridis
ENSCLAG00000006380	SALL1	78	100.000	ENSTBEG00000002119	-	55	100.000	Tupaia_belangeri
ENSCLAG00000006380	SALL1	90	92.334	ENSUAMG00000023379	-	92	92.249	Ursus_americanus
ENSCLAG00000006380	SALL1	90	91.032	ENSVVUG00000019383	-	99	91.286	Vulpes_vulpes
ENSCLAG00000006380	SALL1	79	61.538	ENSXETG00000017176	sall2	73	61.538	Xenopus_tropicalis
ENSCLAG00000006380	SALL1	100	76.370	ENSXETG00000018417	sall1	99	76.449	Xenopus_tropicalis
ENSCLAG00000006380	SALL1	100	67.961	ENSXMAG00000016273	sall1a	99	67.638	Xiphophorus_maculatus