EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCLAG00000006449 (Gene tree)
Gene ID
102024144
Gene Symbol
RBFOX3
Alias
FOX-3|HRNBP3|NeuN
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Chinchilla_lanigera
Status
putative
Strand
Plus strand
Length
22412 bases
Position
chrJH721966.1:3624378-3646789
Accession
102024144
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCLAP00000009269Fox-1_CPF12414.84e-4211
ENSCLAP00000009267Fox-1_CPF12414.84.3e-4211
ENSCLAP00000009268Fox-1_CPF12414.85.2e-4211
ENSCLAP00000009268RRM_1PF00076.229.7e-1911
ENSCLAP00000009267RRM_1PF00076.221e-1811
ENSCLAP00000009269RRM_1PF00076.220.0001411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCLAT00000009398RBFOX3-203990-ENSCLAP00000009269329 (aa)-UPI0003340613
ENSCLAT00000009397RBFOX3-2022550XM_005407339ENSCLAP00000009268360 (aa)XP_005407396UPI0006974664
ENSCLAT00000009396RBFOX3-2012749XM_005407340ENSCLAP00000009267374 (aa)XP_005407397UPI000333C830
Gene Model
Click here to download ENSCLAG00000006449's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006449's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCLAG00000006449RBFOX310062.468ENSCLAG00000012761RBFOX19158.454
ENSCLAG00000006449RBFOX39652.970ENSCLAG00000017106RBFOX29254.094
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCLAG00000006449RBFOX310098.176ENSG00000167281RBFOX310098.730Homo_sapiens
ENSCLAG00000006449RBFOX38089.583ENSAPOG00000015658-8959.053Acanthochromis_polyacanthus
ENSCLAG00000006449RBFOX310072.340ENSAPOG00000021630rbfox3b8270.718Acanthochromis_polyacanthus
ENSCLAG00000006449RBFOX39878.049ENSAMEG00000014170RBFOX39374.453Ailuropoda_melanoleuca
ENSCLAG00000006449RBFOX38381.423ENSACIG00000010817rbfox3b9565.909Amphilophus_citrinellus
ENSCLAG00000006449RBFOX39660.989ENSACIG00000003768-8360.458Amphilophus_citrinellus
ENSCLAG00000006449RBFOX37989.583ENSAOCG00000010786-8065.909Amphiprion_ocellaris
ENSCLAG00000006449RBFOX310071.547ENSAOCG00000012358rbfox3b8169.828Amphiprion_ocellaris
ENSCLAG00000006449RBFOX37989.583ENSAPEG00000015891-7961.725Amphiprion_percula
ENSCLAG00000006449RBFOX37793.750ENSAPEG00000019081rbfox3b7493.333Amphiprion_percula
ENSCLAG00000006449RBFOX310072.176ENSATEG00000019945rbfox3b9671.023Anabas_testudineus
ENSCLAG00000006449RBFOX39666.954ENSATEG00000023101-9366.193Anabas_testudineus
ENSCLAG00000006449RBFOX310077.901ENSACAG00000016093RBFOX38378.386Anolis_carolinensis
ENSCLAG00000006449RBFOX310097.264ENSANAG00000023457RBFOX39197.264Aotus_nancymaae
ENSCLAG00000006449RBFOX310071.809ENSACLG00000020011rbfox3b9569.540Astatotilapia_calliptera
ENSCLAG00000006449RBFOX310070.799ENSACLG00000025552-8169.540Astatotilapia_calliptera
ENSCLAG00000006449RBFOX39672.286ENSAMXG00000037246rbfox3a9071.429Astyanax_mexicanus
ENSCLAG00000006449RBFOX310066.391ENSAMXG00000042841rbfox3b8565.230Astyanax_mexicanus
ENSCLAG00000006449RBFOX310096.353ENSBTAG00000006280RBFOX310096.353Bos_taurus
ENSCLAG00000006449RBFOX310097.264ENSCJAG00000009563RBFOX310097.264Callithrix_jacchus
ENSCLAG00000006449RBFOX37982.168ENSCAFG00000005547RBFOX310076.147Canis_familiaris
ENSCLAG00000006449RBFOX310097.861ENSCAFG00020008126RBFOX310097.861Canis_lupus_dingo
ENSCLAG00000006449RBFOX310096.524ENSCHIG00000009124RBFOX310096.524Capra_hircus
ENSCLAG00000006449RBFOX310099.088ENSTSYG00000029617RBFOX310099.088Carlito_syrichta
ENSCLAG00000006449RBFOX310098.936ENSCPOG00000021703RBFOX310098.936Cavia_porcellus
ENSCLAG00000006449RBFOX310097.264ENSCCAG00000028450RBFOX310097.264Cebus_capucinus
ENSCLAG00000006449RBFOX39792.500ENSCATG00000018349RBFOX310085.278Cercocebus_atys
ENSCLAG00000006449RBFOX310085.556ENSCSAG00000002355RBFOX310085.556Chlorocebus_sabaeus
ENSCLAG00000006449RBFOX39677.437ENSCPBG00000010904RBFOX39577.971Chrysemys_picta_bellii
ENSCLAG00000006449RBFOX310098.663ENSCANG00000043120RBFOX310098.663Colobus_angolensis_palliatus
ENSCLAG00000006449RBFOX310096.533ENSCGRG00001019476Rbfox310096.533Cricetulus_griseus_chok1gshd
ENSCLAG00000006449RBFOX310096.533ENSCGRG00000003268Rbfox310096.533Cricetulus_griseus_crigri
ENSCLAG00000006449RBFOX38489.583ENSCSEG00000015567RBFOX38963.852Cynoglossus_semilaevis
ENSCLAG00000006449RBFOX310057.808ENSCSEG00000020606RBFOX38359.581Cynoglossus_semilaevis
ENSCLAG00000006449RBFOX310071.547ENSCVAG00000006882rbfox3b8169.828Cyprinodon_variegatus
ENSCLAG00000006449RBFOX38381.250ENSDARG00000074310rbfox3b9670.000Danio_rerio
ENSCLAG00000006449RBFOX39671.429ENSDARG00000010083rbfox3a9170.571Danio_rerio
ENSCLAG00000006449RBFOX39182.622ENSDNOG00000039391RBFOX39081.416Dasypus_novemcinctus
ENSCLAG00000006449RBFOX39685.515ENSDORG00000005352Rbfox39685.515Dipodomys_ordii
ENSCLAG00000006449RBFOX310062.982ENSEBUG00000002129RBFOX39263.102Eptatretus_burgeri
ENSCLAG00000006449RBFOX38753.106ENSEBUG00000013559RBFOX37152.805Eptatretus_burgeri
ENSCLAG00000006449RBFOX310085.042ENSEASG00005005059RBFOX310085.042Equus_asinus_asinus
ENSCLAG00000006449RBFOX310085.319ENSECAG00000023811RBFOX310085.319Equus_caballus
ENSCLAG00000006449RBFOX39882.740ENSEEUG00000013974RBFOX39882.740Erinaceus_europaeus
ENSCLAG00000006449RBFOX35363.158ENSELUG00000009807-5067.059Esox_lucius
ENSCLAG00000006449RBFOX310071.353ENSELUG00000017963rbfox3b9566.246Esox_lucius
ENSCLAG00000006449RBFOX310094.225ENSFCAG00000002555RBFOX310094.225Felis_catus
ENSCLAG00000006449RBFOX39668.539ENSFALG00000012288RBFOX39262.201Ficedula_albicollis
ENSCLAG00000006449RBFOX310093.883ENSFDAG00000007489RBFOX310093.883Fukomys_damarensis
ENSCLAG00000006449RBFOX310069.184ENSFHEG00000008550rbfox3b9567.192Fundulus_heteroclitus
ENSCLAG00000006449RBFOX310063.228ENSGMOG00000019304-9968.580Gadus_morhua
ENSCLAG00000006449RBFOX39678.261ENSGALG00000032889RBFOX38380.290Gallus_gallus
ENSCLAG00000006449RBFOX39869.492ENSGAFG00000005025rbfox3b8668.966Gambusia_affinis
ENSCLAG00000006449RBFOX39672.802ENSGACG00000002138-9672.802Gasterosteus_aculeatus
ENSCLAG00000006449RBFOX39677.437ENSGAGG00000020025RBFOX39577.971Gopherus_agassizii
ENSCLAG00000006449RBFOX310098.396ENSGGOG00000012546RBFOX310098.396Gorilla_gorilla
ENSCLAG00000006449RBFOX310071.809ENSHBUG00000018099rbfox3b8270.442Haplochromis_burtoni
ENSCLAG00000006449RBFOX310071.088ENSHBUG00000023098-9069.890Haplochromis_burtoni
ENSCLAG00000006449RBFOX310097.619ENSHGLG00000008679RBFOX310097.619Heterocephalus_glaber_female
ENSCLAG00000006449RBFOX39893.496ENSHGLG00100014739RBFOX39893.767Heterocephalus_glaber_male
ENSCLAG00000006449RBFOX37888.636ENSHCOG00000001863RBFOX38588.636Hippocampus_comes
ENSCLAG00000006449RBFOX39665.994ENSHCOG00000007444RBFOX37864.407Hippocampus_comes
ENSCLAG00000006449RBFOX310064.167ENSIPUG00000021966rbfox3b8474.779Ictalurus_punctatus
ENSCLAG00000006449RBFOX39671.978ENSIPUG00000012010rbfox3a7388.462Ictalurus_punctatus
ENSCLAG00000006449RBFOX39896.721ENSSTOG00000026817RBFOX310097.297Ictidomys_tridecemlineatus
ENSCLAG00000006449RBFOX310097.594ENSJJAG00000014167Rbfox310097.594Jaculus_jaculus
ENSCLAG00000006449RBFOX310071.547ENSKMAG00000006726rbfox3b8763.852Kryptolebias_marmoratus
ENSCLAG00000006449RBFOX310072.074ENSLBEG00000004030rbfox3b9565.341Labrus_bergylta
ENSCLAG00000006449RBFOX39671.264ENSLBEG00000022508-8170.402Labrus_bergylta
ENSCLAG00000006449RBFOX39668.280ENSLACG00000018409-9364.563Latimeria_chalumnae
ENSCLAG00000006449RBFOX39675.287ENSLOCG00000012267rbfox3a9074.425Lepisosteus_oculatus
ENSCLAG00000006449RBFOX310096.389ENSLAFG00000016623RBFOX310096.257Loxodonta_africana
ENSCLAG00000006449RBFOX310098.056ENSMFAG00000002247RBFOX310098.056Macaca_fascicularis
ENSCLAG00000006449RBFOX310098.176ENSMMUG00000023028RBFOX310098.176Macaca_mulatta
ENSCLAG00000006449RBFOX310093.048ENSMNEG00000041147RBFOX310093.048Macaca_nemestrina
ENSCLAG00000006449RBFOX39792.500ENSMLEG00000025686RBFOX310085.278Mandrillus_leucophaeus
ENSCLAG00000006449RBFOX38381.250ENSMAMG00000019810rbfox3b9565.330Mastacembelus_armatus
ENSCLAG00000006449RBFOX39666.379ENSMAMG00000020600-9265.768Mastacembelus_armatus
ENSCLAG00000006449RBFOX36665.185ENSMZEG00005003055-5488.800Maylandia_zebra
ENSCLAG00000006449RBFOX310071.809ENSMZEG00005000781rbfox3b8270.442Maylandia_zebra
ENSCLAG00000006449RBFOX35390.625ENSMGAG00000005600RBFOX37390.625Meleagris_gallopavo
ENSCLAG00000006449RBFOX39695.556ENSMAUG00000013543Rbfox39695.556Mesocricetus_auratus
ENSCLAG00000006449RBFOX310097.059ENSMICG00000014898RBFOX310097.059Microcebus_murinus
ENSCLAG00000006449RBFOX310096.524ENSMOCG00000015373Rbfox310096.524Microtus_ochrogaster
ENSCLAG00000006449RBFOX310069.482ENSMMOG00000020193rbfox3b9162.148Mola_mola
ENSCLAG00000006449RBFOX39678.841ENSMODG00000002089RBFOX38380.870Monodelphis_domestica
ENSCLAG00000006449RBFOX310072.414ENSMALG00000018270-9265.341Monopterus_albus
ENSCLAG00000006449RBFOX310070.718ENSMALG00000020407rbfox3b8168.966Monopterus_albus
ENSCLAG00000006449RBFOX310097.059MGP_CAROLIEiJ_G0017487Rbfox310097.633Mus_caroli
ENSCLAG00000006449RBFOX310096.791ENSMUSG00000025576Rbfox310097.241Mus_musculus
ENSCLAG00000006449RBFOX310097.333MGP_PahariEiJ_G0018614Rbfox310097.931Mus_pahari
ENSCLAG00000006449RBFOX310097.326MGP_SPRETEiJ_G0018331Rbfox310097.633Mus_spretus
ENSCLAG00000006449RBFOX39876.866ENSMPUG00000012319RBFOX39277.114Mustela_putorius_furo
ENSCLAG00000006449RBFOX310097.326ENSNGAG00000018006Rbfox310097.326Nannospalax_galili
ENSCLAG00000006449RBFOX310069.890ENSNBRG00000010102rbfox3b7492.593Neolamprologus_brichardi
ENSCLAG00000006449RBFOX37893.333ENSNBRG00000022885-8187.805Neolamprologus_brichardi
ENSCLAG00000006449RBFOX361100.000ENSNLEG00000000153-82100.000Nomascus_leucogenys
ENSCLAG00000006449RBFOX39666.377ENSMEUG00000004218-9666.667Notamacropus_eugenii
ENSCLAG00000006449RBFOX36897.753ENSOPRG00000016279-7597.753Ochotona_princeps
ENSCLAG00000006449RBFOX3100100.000ENSODEG00000009433RBFOX3100100.000Octodon_degus
ENSCLAG00000006449RBFOX310077.309ENSONIG00000009549rbfox3b9676.648Oreochromis_niloticus
ENSCLAG00000006449RBFOX310071.350ENSONIG00000007282-8770.115Oreochromis_niloticus
ENSCLAG00000006449RBFOX37981.469ENSOCUG00000014217RBFOX38280.132Oryctolagus_cuniculus
ENSCLAG00000006449RBFOX310072.149ENSORLG00000000905rbfox3b6767.725Oryzias_latipes
ENSCLAG00000006449RBFOX310072.149ENSORLG00020018030rbfox3b8966.877Oryzias_latipes_hni
ENSCLAG00000006449RBFOX310071.074ENSORLG00015009200rbfox3b9181.250Oryzias_latipes_hsok
ENSCLAG00000006449RBFOX36675.969ENSOMEG00000014677rbfox3b7676.995Oryzias_melastigma
ENSCLAG00000006449RBFOX310084.444ENSOGAG00000029595RBFOX39479.449Otolemur_garnettii
ENSCLAG00000006449RBFOX36894.737ENSOARG00000002908RBFOX39257.722Ovis_aries
ENSCLAG00000006449RBFOX39397.904ENSPPAG00000025383RBFOX39498.020Pan_paniscus
ENSCLAG00000006449RBFOX310094.167ENSPPRG00000007819RBFOX310094.167Panthera_pardus
ENSCLAG00000006449RBFOX310098.396ENSPTRG00000009727RBFOX310098.396Pan_troglodytes
ENSCLAG00000006449RBFOX39792.500ENSPANG00000019837RBFOX310085.278Papio_anubis
ENSCLAG00000006449RBFOX39674.309ENSPKIG00000010299rbfox3a8566.491Paramormyrops_kingsleyae
ENSCLAG00000006449RBFOX310059.259ENSPKIG00000022633-8558.056Paramormyrops_kingsleyae
ENSCLAG00000006449RBFOX38769.524ENSPMGG00000008000rbfox3b7768.333Periophthalmus_magnuspinnatus
ENSCLAG00000006449RBFOX310096.791ENSPEMG00000010500Rbfox310096.791Peromyscus_maniculatus_bairdii
ENSCLAG00000006449RBFOX36361.753ENSPMAG00000008689rbfox3b9962.151Petromyzon_marinus
ENSCLAG00000006449RBFOX39693.913ENSPCIG00000005766RBFOX39694.203Phascolarctos_cinereus
ENSCLAG00000006449RBFOX310072.340ENSPFOG00000018294rbfox3b9270.625Poecilia_formosa
ENSCLAG00000006449RBFOX36585.792ENSPLAG00000000481rbfox3b7967.647Poecilia_latipinna
ENSCLAG00000006449RBFOX310069.184ENSPMEG00000022997rbfox3b9567.192Poecilia_mexicana
ENSCLAG00000006449RBFOX310071.901ENSPREG00000012886rbfox3b8670.115Poecilia_reticulata
ENSCLAG00000006449RBFOX310074.332ENSPPYG00000008704RBFOX39674.332Pongo_abelii
ENSCLAG00000006449RBFOX39692.754ENSPCAG00000001401RBFOX39692.754Procavia_capensis
ENSCLAG00000006449RBFOX310097.500ENSPCOG00000012689RBFOX310097.222Propithecus_coquereli
ENSCLAG00000006449RBFOX39685.838ENSPVAG00000015243RBFOX39687.861Pteropus_vampyrus
ENSCLAG00000006449RBFOX37893.333ENSPNYG00000009079-7787.805Pundamilia_nyererei
ENSCLAG00000006449RBFOX37492.593ENSPNYG00000010414rbfox3b7492.593Pundamilia_nyererei
ENSCLAG00000006449RBFOX39672.802ENSPNAG00000002889rbfox3a9364.375Pygocentrus_nattereri
ENSCLAG00000006449RBFOX38383.333ENSPNAG00000018173rbfox3b8560.510Pygocentrus_nattereri
ENSCLAG00000006449RBFOX310097.333ENSRNOG00000003386Rbfox310097.333Rattus_norvegicus
ENSCLAG00000006449RBFOX39792.812ENSRBIG00000040449RBFOX38592.500Rhinopithecus_bieti
ENSCLAG00000006449RBFOX39792.812ENSRROG00000000766RBFOX310085.556Rhinopithecus_roxellana
ENSCLAG00000006449RBFOX310097.594ENSSBOG00000031591RBFOX310097.594Saimiri_boliviensis_boliviensis
ENSCLAG00000006449RBFOX39578.662ENSSHAG00000016076RBFOX39578.981Sarcophilus_harrisii
ENSCLAG00000006449RBFOX39674.862ENSSFOG00015023260rbfox3a8970.978Scleropages_formosus
ENSCLAG00000006449RBFOX39658.908ENSSFOG00015004716RBFOX38956.329Scleropages_formosus
ENSCLAG00000006449RBFOX310068.871ENSSMAG00000019052-9567.241Scophthalmus_maximus
ENSCLAG00000006449RBFOX310068.957ENSSMAG00000012618rbfox3b7167.033Scophthalmus_maximus
ENSCLAG00000006449RBFOX310069.184ENSSDUG00000023183rbfox3b9567.192Seriola_dumerili
ENSCLAG00000006449RBFOX39665.230ENSSDUG00000015801-8181.481Seriola_dumerili
ENSCLAG00000006449RBFOX310071.547ENSSLDG00000000149rbfox3b8169.828Seriola_lalandi_dorsalis
ENSCLAG00000006449RBFOX37989.583ENSSLDG00000016098-9066.038Seriola_lalandi_dorsalis
ENSCLAG00000006449RBFOX39677.810ENSSPUG00000011733RBFOX39578.963Sphenodon_punctatus
ENSCLAG00000006449RBFOX38381.250ENSSPAG00000017571rbfox3b8061.364Stegastes_partitus
ENSCLAG00000006449RBFOX38863.551ENSSPAG00000004898-8162.617Stegastes_partitus
ENSCLAG00000006449RBFOX38896.970ENSSSCG00000039498RBFOX310096.970Sus_scrofa
ENSCLAG00000006449RBFOX310068.435ENSTRUG00000004894rbfox3b9066.125Takifugu_rubripes
ENSCLAG00000006449RBFOX310064.304ENSTNIG00000011278rbfox3b9260.238Tetraodon_nigroviridis
ENSCLAG00000006449RBFOX39269.369ENSTBEG00000004296-9663.788Tupaia_belangeri
ENSCLAG00000006449RBFOX39688.986ENSTTRG00000003676RBFOX39691.014Tursiops_truncatus
ENSCLAG00000006449RBFOX310084.444ENSUAMG00000004668RBFOX310084.444Ursus_americanus
ENSCLAG00000006449RBFOX310097.778ENSVVUG00000017864RBFOX38997.778Vulpes_vulpes
ENSCLAG00000006449RBFOX310062.881ENSXETG00000020236rbfox39159.897Xenopus_tropicalis
ENSCLAG00000006449RBFOX310070.248ENSXCOG00000018262rbfox3b9564.943Xiphophorus_couchianus
ENSCLAG00000006449RBFOX310072.340ENSXMAG00000012939rbfox3b9164.264Xiphophorus_maculatus

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