EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000006516 (Gene tree)
Gene ID: 102006836
Gene Symbol: -
Alias: -
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 32066 bases
Position: chrJH721905.1:8971582-9003647
Accession: 102006836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000009384	dsrm	PF00035.26	2.5e-31	1	3
ENSCLAP00000009384	dsrm	PF00035.26	2.5e-31	2	3
ENSCLAP00000009384	dsrm	PF00035.26	2.5e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000009513	-	3009	XM_013518254	ENSCLAP00000009384	495 (aa)	XP_013373708	-

Gene Model

Click here to download ENSCLAG00000006516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000006516	-	86	51.577	ENSCLAG00000001824	STAU2	83	51.357
ENSCLAG00000006516	-	100	79.276	ENSCLAG00000002784	-	98	79.276

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006516	-	100	96.970	ENSG00000124214	STAU1	99	96.970	Homo_sapiens
ENSCLAG00000006516	-	99	73.600	ENSAPOG00000017260	stau1	71	73.600	Acanthochromis_polyacanthus
ENSCLAG00000006516	-	99	93.686	ENSAMEG00000013681	STAU1	69	93.686	Ailuropoda_melanoleuca
ENSCLAG00000006516	-	99	75.152	ENSACIG00000015918	stau1	71	75.806	Amphilophus_citrinellus
ENSCLAG00000006516	-	99	74.600	ENSAOCG00000012224	stau1	71	74.600	Amphiprion_ocellaris
ENSCLAG00000006516	-	99	74.800	ENSAPEG00000012308	stau1	71	74.800	Amphiprion_percula
ENSCLAG00000006516	-	99	75.000	ENSATEG00000024600	stau1	73	75.000	Anabas_testudineus
ENSCLAG00000006516	-	99	88.798	ENSAPLG00000010527	STAU1	69	88.798	Anas_platyrhynchos
ENSCLAG00000006516	-	99	88.618	ENSACAG00000015909	STAU1	70	88.618	Anolis_carolinensis
ENSCLAG00000006516	-	100	96.970	ENSANAG00000032714	STAU1	99	90.101	Aotus_nancymaae
ENSCLAG00000006516	-	99	73.600	ENSACLG00000012270	stau1	71	73.600	Astatotilapia_calliptera
ENSCLAG00000006516	-	100	72.691	ENSAMXG00000016812	stau1	84	72.691	Astyanax_mexicanus
ENSCLAG00000006516	-	100	93.939	ENSBTAG00000000241	STAU1	85	93.939	Bos_taurus
ENSCLAG00000006516	-	100	96.768	ENSCJAG00000016233	STAU1	85	95.960	Callithrix_jacchus
ENSCLAG00000006516	-	100	94.141	ENSCAFG00000011347	STAU1	83	94.141	Canis_familiaris
ENSCLAG00000006516	-	100	92.829	ENSCAFG00020017123	STAU1	82	92.829	Canis_lupus_dingo
ENSCLAG00000006516	-	100	93.737	ENSCHIG00000001799	-	100	87.475	Capra_hircus
ENSCLAG00000006516	-	100	93.131	ENSTSYG00000036179	-	85	93.131	Carlito_syrichta
ENSCLAG00000006516	-	100	94.747	ENSCAPG00000017041	STAU1	99	94.747	Cavia_aperea
ENSCLAG00000006516	-	100	95.354	ENSCPOG00000005566	STAU1	100	95.354	Cavia_porcellus
ENSCLAG00000006516	-	100	96.768	ENSCCAG00000034339	STAU1	85	96.768	Cebus_capucinus
ENSCLAG00000006516	-	100	96.970	ENSCATG00000028474	STAU1	99	96.970	Cercocebus_atys
ENSCLAG00000006516	-	100	95.758	ENSCSAG00000014986	STAU1	99	95.758	Chlorocebus_sabaeus
ENSCLAG00000006516	-	100	94.960	ENSCHOG00000001511	STAU1	85	94.960	Choloepus_hoffmanni
ENSCLAG00000006516	-	99	88.821	ENSCPBG00000026741	STAU1	71	88.821	Chrysemys_picta_bellii
ENSCLAG00000006516	-	100	95.758	ENSCANG00000039220	STAU1	99	87.097	Colobus_angolensis_palliatus
ENSCLAG00000006516	-	100	92.727	ENSCGRG00001013453	Stau1	100	92.727	Cricetulus_griseus_chok1gshd
ENSCLAG00000006516	-	100	92.727	ENSCGRG00000007216	Stau1	100	92.727	Cricetulus_griseus_crigri
ENSCLAG00000006516	-	99	67.206	ENSCSEG00000000792	stau1	68	67.944	Cynoglossus_semilaevis
ENSCLAG00000006516	-	99	71.951	ENSCVAG00000005906	stau1	86	72.617	Cyprinodon_variegatus
ENSCLAG00000006516	-	99	72.854	ENSDARG00000044182	stau1	78	72.854	Danio_rerio
ENSCLAG00000006516	-	100	95.161	ENSDNOG00000014933	STAU1	83	95.161	Dasypus_novemcinctus
ENSCLAG00000006516	-	100	92.727	ENSDORG00000030220	Stau1	100	92.727	Dipodomys_ordii
ENSCLAG00000006516	-	84	96.522	ENSETEG00000018235	STAU1	72	96.522	Echinops_telfairi
ENSCLAG00000006516	-	100	95.960	ENSEASG00005023343	STAU1	88	95.405	Equus_asinus_asinus
ENSCLAG00000006516	-	100	94.747	ENSECAG00000012894	STAU1	85	94.747	Equus_caballus
ENSCLAG00000006516	-	81	93.516	ENSEEUG00000014344	STAU1	68	93.516	Erinaceus_europaeus
ENSCLAG00000006516	-	99	72.441	ENSELUG00000002529	stau1	77	72.441	Esox_lucius
ENSCLAG00000006516	-	100	95.354	ENSFCAG00000001447	STAU1	99	87.879	Felis_catus
ENSCLAG00000006516	-	99	85.976	ENSFALG00000012940	STAU1	70	85.976	Ficedula_albicollis
ENSCLAG00000006516	-	100	98.384	ENSFDAG00000014119	-	100	98.384	Fukomys_damarensis
ENSCLAG00000006516	-	99	73.887	ENSFDAG00000020837	-	98	74.037	Fukomys_damarensis
ENSCLAG00000006516	-	99	73.200	ENSFHEG00000013517	stau1	85	73.131	Fundulus_heteroclitus
ENSCLAG00000006516	-	99	63.405	ENSGMOG00000016850	stau1	71	63.405	Gadus_morhua
ENSCLAG00000006516	-	99	89.206	ENSGALG00000004736	STAU1	70	88.415	Gallus_gallus
ENSCLAG00000006516	-	99	73.547	ENSGAFG00000010437	stau1	71	73.547	Gambusia_affinis
ENSCLAG00000006516	-	99	73.948	ENSGACG00000001352	stau1	72	73.653	Gasterosteus_aculeatus
ENSCLAG00000006516	-	99	87.602	ENSGAGG00000009825	STAU1	70	87.602	Gopherus_agassizii
ENSCLAG00000006516	-	100	97.172	ENSGGOG00000025351	STAU1	100	96.712	Gorilla_gorilla
ENSCLAG00000006516	-	99	73.800	ENSHBUG00000023668	stau1	71	73.800	Haplochromis_burtoni
ENSCLAG00000006516	-	100	98.384	ENSHGLG00000008730	STAU1	100	98.384	Heterocephalus_glaber_female
ENSCLAG00000006516	-	100	99.596	ENSHGLG00100000098	STAU1	100	99.596	Heterocephalus_glaber_male
ENSCLAG00000006516	-	99	71.227	ENSHCOG00000018461	stau1	70	71.227	Hippocampus_comes
ENSCLAG00000006516	-	94	73.561	ENSIPUG00000023725	stau1	70	73.561	Ictalurus_punctatus
ENSCLAG00000006516	-	100	96.162	ENSSTOG00000003634	STAU1	100	96.162	Ictidomys_tridecemlineatus
ENSCLAG00000006516	-	100	94.141	ENSJJAG00000020032	Stau1	100	94.141	Jaculus_jaculus
ENSCLAG00000006516	-	99	71.660	ENSKMAG00000007135	stau1	71	72.323	Kryptolebias_marmoratus
ENSCLAG00000006516	-	99	71.683	ENSLBEG00000020172	stau1	71	71.683	Labrus_bergylta
ENSCLAG00000006516	-	99	82.424	ENSLACG00000016157	STAU1	70	81.113	Latimeria_chalumnae
ENSCLAG00000006516	-	99	78.629	ENSLOCG00000003134	stau1	71	78.629	Lepisosteus_oculatus
ENSCLAG00000006516	-	100	93.131	ENSLAFG00000003238	STAU1	96	93.131	Loxodonta_africana
ENSCLAG00000006516	-	100	96.970	ENSMFAG00000040931	STAU1	100	97.426	Macaca_fascicularis
ENSCLAG00000006516	-	100	96.970	ENSMMUG00000002302	STAU1	100	97.426	Macaca_mulatta
ENSCLAG00000006516	-	100	96.970	ENSMNEG00000033821	STAU1	99	96.970	Macaca_nemestrina
ENSCLAG00000006516	-	100	95.960	ENSMLEG00000031383	STAU1	85	95.960	Mandrillus_leucophaeus
ENSCLAG00000006516	-	99	75.403	ENSMAMG00000017586	stau1	74	75.403	Mastacembelus_armatus
ENSCLAG00000006516	-	99	73.600	ENSMZEG00005015605	stau1	71	73.600	Maylandia_zebra
ENSCLAG00000006516	-	99	89.002	ENSMGAG00000004719	STAU1	69	89.002	Meleagris_gallopavo
ENSCLAG00000006516	-	100	92.525	ENSMAUG00000013846	Stau1	100	92.525	Mesocricetus_auratus
ENSCLAG00000006516	-	100	95.960	ENSMICG00000001995	STAU1	85	95.960	Microcebus_murinus
ENSCLAG00000006516	-	100	93.737	ENSMOCG00000018743	Stau1	100	93.737	Microtus_ochrogaster
ENSCLAG00000006516	-	100	72.379	ENSMMOG00000015455	stau1	98	72.837	Mola_mola
ENSCLAG00000006516	-	100	91.313	ENSMODG00000016276	STAU1	73	91.313	Monodelphis_domestica
ENSCLAG00000006516	-	99	74.600	ENSMALG00000000045	stau1	71	74.600	Monopterus_albus
ENSCLAG00000006516	-	100	91.919	MGP_CAROLIEiJ_G0024699	Stau1	100	91.919	Mus_caroli
ENSCLAG00000006516	-	100	91.313	ENSMUSG00000039536	Stau1	100	91.313	Mus_musculus
ENSCLAG00000006516	-	100	91.515	MGP_PahariEiJ_G0026141	Stau1	100	91.515	Mus_pahari
ENSCLAG00000006516	-	100	90.909	MGP_SPRETEiJ_G0025619	Stau1	100	90.909	Mus_spretus
ENSCLAG00000006516	-	99	94.908	ENSMPUG00000017581	STAU1	72	94.908	Mustela_putorius_furo
ENSCLAG00000006516	-	100	94.343	ENSMLUG00000008407	STAU1	83	94.343	Myotis_lucifugus
ENSCLAG00000006516	-	100	95.556	ENSNGAG00000007108	Stau1	100	95.556	Nannospalax_galili
ENSCLAG00000006516	-	99	73.800	ENSNBRG00000017596	stau1	71	73.800	Neolamprologus_brichardi
ENSCLAG00000006516	-	100	96.768	ENSNLEG00000006955	STAU1	99	96.768	Nomascus_leucogenys
ENSCLAG00000006516	-	95	91.880	ENSMEUG00000003263	STAU1	80	91.880	Notamacropus_eugenii
ENSCLAG00000006516	-	100	93.145	ENSOPRG00000014569	STAU1	86	93.145	Ochotona_princeps
ENSCLAG00000006516	-	100	97.374	ENSODEG00000006523	STAU1	99	97.374	Octodon_degus
ENSCLAG00000006516	-	99	74.000	ENSONIG00000004152	stau1	68	74.000	Oreochromis_niloticus
ENSCLAG00000006516	-	99	88.618	ENSOANG00000006394	STAU1	70	88.618	Ornithorhynchus_anatinus
ENSCLAG00000006516	-	100	94.949	ENSOCUG00000006214	STAU1	85	94.949	Oryctolagus_cuniculus
ENSCLAG00000006516	-	99	72.289	ENSOMEG00000002388	stau1	71	72.289	Oryzias_melastigma
ENSCLAG00000006516	-	100	64.625	ENSOGAG00000028222	-	98	65.070	Otolemur_garnettii
ENSCLAG00000006516	-	100	95.152	ENSOGAG00000002127	STAU1	83	95.152	Otolemur_garnettii
ENSCLAG00000006516	-	100	93.737	ENSOARG00000012204	STAU1	83	93.737	Ovis_aries
ENSCLAG00000006516	-	100	97.172	ENSPPAG00000032023	STAU1	100	96.712	Pan_paniscus
ENSCLAG00000006516	-	100	95.354	ENSPPRG00000003436	STAU1	99	95.354	Panthera_pardus
ENSCLAG00000006516	-	100	95.354	ENSPTIG00000011768	STAU1	99	94.024	Panthera_tigris_altaica
ENSCLAG00000006516	-	100	97.172	ENSPTRG00000023130	STAU1	100	96.712	Pan_troglodytes
ENSCLAG00000006516	-	100	95.960	ENSPANG00000020560	STAU1	99	91.129	Papio_anubis
ENSCLAG00000006516	-	99	73.400	ENSPKIG00000024588	stau1	71	73.400	Paramormyrops_kingsleyae
ENSCLAG00000006516	-	99	87.398	ENSPSIG00000010731	STAU1	70	87.398	Pelodiscus_sinensis
ENSCLAG00000006516	-	99	75.050	ENSPMGG00000018553	stau1	98	72.008	Periophthalmus_magnuspinnatus
ENSCLAG00000006516	-	100	92.929	ENSPEMG00000022045	Stau1	100	92.929	Peromyscus_maniculatus_bairdii
ENSCLAG00000006516	-	100	92.323	ENSPCIG00000023269	STAU1	99	86.465	Phascolarctos_cinereus
ENSCLAG00000006516	-	99	73.600	ENSPFOG00000017253	stau1	71	73.600	Poecilia_formosa
ENSCLAG00000006516	-	63	67.834	ENSPLAG00000014829	stau1	77	69.745	Poecilia_latipinna
ENSCLAG00000006516	-	93	72.863	ENSPMEG00000007495	stau1	67	72.863	Poecilia_mexicana
ENSCLAG00000006516	-	99	73.200	ENSPREG00000003477	stau1	71	73.200	Poecilia_reticulata
ENSCLAG00000006516	-	100	95.960	ENSPPYG00000011111	STAU1	85	95.960	Pongo_abelii
ENSCLAG00000006516	-	93	84.416	ENSPCAG00000002459	STAU1	84	84.416	Procavia_capensis
ENSCLAG00000006516	-	100	95.960	ENSPCOG00000027746	STAU1	99	95.960	Propithecus_coquereli
ENSCLAG00000006516	-	83	98.148	ENSPVAG00000015019	STAU1	71	98.148	Pteropus_vampyrus
ENSCLAG00000006516	-	99	73.800	ENSPNYG00000014436	stau1	71	73.800	Pundamilia_nyererei
ENSCLAG00000006516	-	99	72.167	ENSPNAG00000011323	stau1	77	72.167	Pygocentrus_nattereri
ENSCLAG00000006516	-	100	92.121	ENSRNOG00000007781	Stau1	100	92.121	Rattus_norvegicus
ENSCLAG00000006516	-	100	96.970	ENSRBIG00000037345	STAU1	99	96.970	Rhinopithecus_bieti
ENSCLAG00000006516	-	100	95.960	ENSRROG00000039008	STAU1	99	95.556	Rhinopithecus_roxellana
ENSCLAG00000006516	-	100	96.768	ENSSBOG00000034448	STAU1	99	92.121	Saimiri_boliviensis_boliviensis
ENSCLAG00000006516	-	100	91.515	ENSSHAG00000009492	STAU1	83	91.515	Sarcophilus_harrisii
ENSCLAG00000006516	-	99	75.806	ENSSFOG00015021497	stau1	85	72.674	Scleropages_formosus
ENSCLAG00000006516	-	99	74.400	ENSSMAG00000017410	stau1	71	74.400	Scophthalmus_maximus
ENSCLAG00000006516	-	99	75.400	ENSSDUG00000019439	stau1	71	75.400	Seriola_dumerili
ENSCLAG00000006516	-	99	75.400	ENSSLDG00000025040	stau1	71	75.400	Seriola_lalandi_dorsalis
ENSCLAG00000006516	-	99	88.415	ENSSPUG00000017983	STAU1	73	88.391	Sphenodon_punctatus
ENSCLAG00000006516	-	99	74.800	ENSSPAG00000019275	stau1	71	74.800	Stegastes_partitus
ENSCLAG00000006516	-	100	95.152	ENSSSCG00000027444	STAU1	99	95.152	Sus_scrofa
ENSCLAG00000006516	-	99	87.602	ENSTGUG00000008784	STAU1	69	87.602	Taeniopygia_guttata
ENSCLAG00000006516	-	99	74.798	ENSTRUG00000005837	stau1	70	75.453	Takifugu_rubripes
ENSCLAG00000006516	-	99	73.852	ENSTNIG00000014732	stau1	73	73.852	Tetraodon_nigroviridis
ENSCLAG00000006516	-	100	81.250	ENSTBEG00000009404	STAU1	85	81.250	Tupaia_belangeri
ENSCLAG00000006516	-	95	91.667	ENSTTRG00000004285	STAU1	80	91.667	Tursiops_truncatus
ENSCLAG00000006516	-	100	92.430	ENSUAMG00000025449	STAU1	99	92.430	Ursus_americanus
ENSCLAG00000006516	-	75	90.451	ENSUMAG00000024475	STAU1	87	90.451	Ursus_maritimus
ENSCLAG00000006516	-	100	94.949	ENSVPAG00000001313	STAU1	85	94.949	Vicugna_pacos
ENSCLAG00000006516	-	100	93.028	ENSVVUG00000022325	STAU1	73	93.028	Vulpes_vulpes
ENSCLAG00000006516	-	99	80.488	ENSXETG00000001783	stau1	70	80.691	Xenopus_tropicalis
ENSCLAG00000006516	-	55	69.708	ENSXCOG00000008804	stau1	72	69.655	Xiphophorus_couchianus
ENSCLAG00000006516	-	99	73.547	ENSXMAG00000016175	stau1	71	73.547	Xiphophorus_maculatus