EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000006603 (Gene tree)
Gene ID: 102026260
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 5597 bases
Position: chrJH722005.1:589239-594835
Accession: 102026260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000009516	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000009645	-	2066	XM_005411465	ENSCLAP00000009516	203 (aa)	XP_005411522	UPI00038EEB84

Gene Model

Click here to download ENSCLAG00000006603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006603's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000006603	-	91	41.584	ENSCLAG00000005031	RAB33A	85	41.584
ENSCLAG00000006603	-	92	54.839	ENSCLAG00000015776	RAB1B	90	54.839
ENSCLAG00000006603	-	93	45.745	ENSCLAG00000005708	RAB2A	89	45.745
ENSCLAG00000006603	-	79	37.654	ENSCLAG00000005888	NRAS	85	37.654
ENSCLAG00000006603	-	79	36.810	ENSCLAG00000002057	MRAS	78	36.810
ENSCLAG00000006603	-	93	42.347	ENSCLAG00000003207	RAB11B	90	42.347
ENSCLAG00000006603	-	80	50.000	ENSCLAG00000014030	RAB30	80	50.000
ENSCLAG00000006603	-	80	32.515	ENSCLAG00000006333	RAB7A	75	32.515
ENSCLAG00000006603	-	83	34.884	ENSCLAG00000016162	RERG	84	34.884
ENSCLAG00000006603	-	78	31.013	ENSCLAG00000017218	-	69	31.013
ENSCLAG00000006603	-	82	45.833	ENSCLAG00000008913	RAB37	78	45.833
ENSCLAG00000006603	-	81	38.182	ENSCLAG00000000797	RAB23	69	38.182
ENSCLAG00000006603	-	88	42.135	ENSCLAG00000006053	-	82	42.135
ENSCLAG00000006603	-	79	39.506	ENSCLAG00000016519	KRAS	97	37.297
ENSCLAG00000006603	-	84	55.294	ENSCLAG00000013339	RAB35	84	55.294
ENSCLAG00000006603	-	78	43.038	ENSCLAG00000015536	RAB6A	76	43.038
ENSCLAG00000006603	-	87	45.455	ENSCLAG00000007435	RAB11A	81	45.455
ENSCLAG00000006603	-	83	30.857	ENSCLAG00000008212	DNAJC27	64	30.857
ENSCLAG00000006603	-	62	30.952	ENSCLAG00000001055	ARL3	69	30.952
ENSCLAG00000006603	-	94	39.698	ENSCLAG00000003784	RAB25	93	39.698
ENSCLAG00000006603	-	92	56.150	ENSCLAG00000014766	RAB1A	89	56.150
ENSCLAG00000006603	-	63	30.496	ENSCLAG00000004200	ARFRP1	68	30.496
ENSCLAG00000006603	-	94	43.590	ENSCLAG00000000113	RAB39B	92	43.590
ENSCLAG00000006603	-	92	45.455	ENSCLAG00000002400	RAB2B	87	45.455
ENSCLAG00000006603	-	79	34.337	ENSCLAG00000015766	RAB24	81	34.940
ENSCLAG00000006603	-	84	54.118	ENSCLAG00000004324	RAB15	80	54.118
ENSCLAG00000006603	-	79	39.752	ENSCLAG00000006992	RAB31	83	39.752
ENSCLAG00000006603	-	67	30.882	ENSCLAG00000007930	ARF5	72	30.882
ENSCLAG00000006603	-	99	41.951	ENSCLAG00000003133	RAB33B	88	41.951
ENSCLAG00000006603	-	84	41.209	ENSCLAG00000009672	RAB34	70	41.209
ENSCLAG00000006603	-	81	44.242	ENSCLAG00000009500	RAB14	77	44.242
ENSCLAG00000006603	-	80	38.235	ENSCLAG00000000494	RAB9A	83	38.235
ENSCLAG00000006603	-	91	36.216	ENSCLAG00000002823	HRAS	96	36.216
ENSCLAG00000006603	-	95	36.979	ENSCLAG00000016650	RAB5C	89	36.979

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006603	-	100	91.133	ENSG00000143545	RAB13	100	91.133	Homo_sapiens
ENSCLAG00000006603	-	95	78.646	ENSACIG00000008584	rab13	92	78.646	Amphilophus_citrinellus
ENSCLAG00000006603	-	100	91.626	ENSANAG00000030247	-	100	91.626	Aotus_nancymaae
ENSCLAG00000006603	-	99	77.723	ENSAMXG00000030712	rab13	99	77.723	Astyanax_mexicanus
ENSCLAG00000006603	-	100	90.148	ENSBTAG00000017604	RAB13	100	90.148	Bos_taurus
ENSCLAG00000006603	-	80	47.853	WBGene00019317	K02E10.1	75	47.853	Caenorhabditis_elegans
ENSCLAG00000006603	-	100	89.655	ENSCJAG00000009933	-	100	89.655	Callithrix_jacchus
ENSCLAG00000006603	-	100	90.148	ENSCHIG00000022271	-	100	90.148	Capra_hircus
ENSCLAG00000006603	-	99	98.020	ENSCPOG00000011491	-	99	98.020	Cavia_porcellus
ENSCLAG00000006603	-	100	90.640	ENSCCAG00000028502	-	100	90.640	Cebus_capucinus
ENSCLAG00000006603	-	100	91.133	ENSCATG00000041779	-	100	91.133	Cercocebus_atys
ENSCLAG00000006603	-	100	91.133	ENSCANG00000036573	-	100	91.133	Colobus_angolensis_palliatus
ENSCLAG00000006603	-	100	88.670	ENSCGRG00001021505	Rab13	100	88.670	Cricetulus_griseus_chok1gshd
ENSCLAG00000006603	-	100	88.670	ENSCGRG00000012126	Rab13	100	88.670	Cricetulus_griseus_crigri
ENSCLAG00000006603	-	99	75.728	ENSCSEG00000002358	rab13	99	75.728	Cynoglossus_semilaevis
ENSCLAG00000006603	-	99	77.723	ENSDARG00000034771	rab13	99	77.723	Danio_rerio
ENSCLAG00000006603	-	100	91.626	ENSDORG00000001591	Rab13	100	91.626	Dipodomys_ordii
ENSCLAG00000006603	-	100	90.640	ENSEASG00005000683	-	100	90.640	Equus_asinus_asinus
ENSCLAG00000006603	-	100	90.640	ENSECAG00000016551	RAB13	100	90.640	Equus_caballus
ENSCLAG00000006603	-	99	86.634	ENSEEUG00000001233	-	99	86.634	Erinaceus_europaeus
ENSCLAG00000006603	-	99	76.238	ENSELUG00000012801	rab13	99	76.238	Esox_lucius
ENSCLAG00000006603	-	100	88.670	ENSFCAG00000045269	-	100	88.670	Felis_catus
ENSCLAG00000006603	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSCLAG00000006603	-	99	76.214	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSCLAG00000006603	-	99	74.752	ENSGACG00000011925	rab13	99	74.752	Gasterosteus_aculeatus
ENSCLAG00000006603	-	88	89.385	ENSGAGG00000000742	-	99	82.178	Gopherus_agassizii
ENSCLAG00000006603	-	100	91.133	ENSGGOG00000023693	RAB13	100	91.133	Gorilla_gorilla
ENSCLAG00000006603	-	100	93.596	ENSHGLG00000008749	RAB13	100	93.596	Heterocephalus_glaber_female
ENSCLAG00000006603	-	100	93.596	ENSHGLG00100013608	RAB13	100	93.596	Heterocephalus_glaber_male
ENSCLAG00000006603	-	99	72.772	ENSHCOG00000007440	rab13	98	83.708	Hippocampus_comes
ENSCLAG00000006603	-	99	77.000	ENSIPUG00000003199	rab13	99	77.000	Ictalurus_punctatus
ENSCLAG00000006603	-	100	91.133	ENSSTOG00000011222	-	100	91.133	Ictidomys_tridecemlineatus
ENSCLAG00000006603	-	100	91.133	ENSJJAG00000010575	Rab13	100	91.133	Jaculus_jaculus
ENSCLAG00000006603	-	99	75.000	ENSKMAG00000001908	rab13	99	75.000	Kryptolebias_marmoratus
ENSCLAG00000006603	-	99	76.000	ENSLBEG00000026779	rab13	99	76.000	Labrus_bergylta
ENSCLAG00000006603	-	88	75.281	ENSLACG00000008103	-	100	75.281	Latimeria_chalumnae
ENSCLAG00000006603	-	100	91.133	ENSMFAG00000041018	RAB13	100	91.133	Macaca_fascicularis
ENSCLAG00000006603	-	100	91.133	ENSMNEG00000028951	-	100	91.133	Macaca_nemestrina
ENSCLAG00000006603	-	100	91.133	ENSMLEG00000042247	-	100	91.133	Mandrillus_leucophaeus
ENSCLAG00000006603	-	99	74.752	ENSMAMG00000014602	rab13	99	74.752	Mastacembelus_armatus
ENSCLAG00000006603	-	100	88.177	ENSMAUG00000015713	Rab13	100	88.177	Mesocricetus_auratus
ENSCLAG00000006603	-	100	90.148	ENSMICG00000010340	-	100	90.148	Microcebus_murinus
ENSCLAG00000006603	-	100	89.655	ENSMOCG00000021448	Rab13	100	89.655	Microtus_ochrogaster
ENSCLAG00000006603	-	99	88.119	ENSMODG00000017295	-	84	88.119	Monodelphis_domestica
ENSCLAG00000006603	-	100	87.192	MGP_CAROLIEiJ_G0025227	Rab13	100	87.192	Mus_caroli
ENSCLAG00000006603	-	100	86.700	ENSMUSG00000027935	Rab13	100	86.700	Mus_musculus
ENSCLAG00000006603	-	99	87.129	MGP_PahariEiJ_G0026671	Rab13	99	87.129	Mus_pahari
ENSCLAG00000006603	-	100	89.163	ENSNGAG00000010309	Rab13	100	89.163	Nannospalax_galili
ENSCLAG00000006603	-	99	74.752	ENSNBRG00000004124	rab13	99	74.752	Neolamprologus_brichardi
ENSCLAG00000006603	-	100	91.133	ENSNLEG00000028944	-	100	91.133	Nomascus_leucogenys
ENSCLAG00000006603	-	100	87.255	ENSMEUG00000009667	-	100	87.255	Notamacropus_eugenii
ENSCLAG00000006603	-	63	99.213	ENSODEG00000012634	-	100	99.213	Octodon_degus
ENSCLAG00000006603	-	100	95.074	ENSODEG00000010443	-	100	95.074	Octodon_degus
ENSCLAG00000006603	-	99	76.238	ENSONIG00000006340	rab13	99	76.238	Oreochromis_niloticus
ENSCLAG00000006603	-	87	94.915	ENSOCUG00000006286	-	99	94.915	Oryctolagus_cuniculus
ENSCLAG00000006603	-	98	77.889	ENSOMEG00000008210	rab13	99	76.238	Oryzias_melastigma
ENSCLAG00000006603	-	99	88.119	ENSOGAG00000016969	-	99	88.119	Otolemur_garnettii
ENSCLAG00000006603	-	100	91.133	ENSPPAG00000028435	-	100	91.133	Pan_paniscus
ENSCLAG00000006603	-	100	88.670	ENSPPRG00000008865	-	100	88.670	Panthera_pardus
ENSCLAG00000006603	-	100	91.133	ENSPTRG00000001370	RAB13	100	91.133	Pan_troglodytes
ENSCLAG00000006603	-	100	91.133	ENSPANG00000004479	-	100	91.133	Papio_anubis
ENSCLAG00000006603	-	99	75.743	ENSPMGG00000007680	rab13	99	75.743	Periophthalmus_magnuspinnatus
ENSCLAG00000006603	-	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSCLAG00000006603	-	100	87.745	ENSPCIG00000029350	-	100	87.745	Phascolarctos_cinereus
ENSCLAG00000006603	-	88	81.461	ENSPLAG00000005832	RAB13	95	81.461	Poecilia_latipinna
ENSCLAG00000006603	-	85	83.815	ENSPREG00000017567	rab13	99	73.762	Poecilia_reticulata
ENSCLAG00000006603	-	100	91.133	ENSPPYG00000000790	-	100	91.133	Pongo_abelii
ENSCLAG00000006603	-	100	91.133	ENSPCOG00000012189	-	100	91.133	Propithecus_coquereli
ENSCLAG00000006603	-	100	89.163	ENSPVAG00000011095	-	100	89.163	Pteropus_vampyrus
ENSCLAG00000006603	-	88	83.708	ENSPNAG00000004189	rab13	94	83.708	Pygocentrus_nattereri
ENSCLAG00000006603	-	100	87.192	ENSRNOG00000016733	Rab13	100	87.192	Rattus_norvegicus
ENSCLAG00000006603	-	100	90.640	ENSRBIG00000008552	-	100	90.640	Rhinopithecus_bieti
ENSCLAG00000006603	-	100	90.640	ENSRROG00000036885	-	100	90.640	Rhinopithecus_roxellana
ENSCLAG00000006603	-	100	90.640	ENSSBOG00000020342	-	100	90.640	Saimiri_boliviensis_boliviensis
ENSCLAG00000006603	-	100	87.745	ENSSHAG00000011866	-	100	87.745	Sarcophilus_harrisii
ENSCLAG00000006603	-	100	91.133	ENSSSCG00000006564	-	100	91.133	Sus_scrofa
ENSCLAG00000006603	-	99	76.238	ENSTRUG00000024177	rab13	99	76.238	Takifugu_rubripes
ENSCLAG00000006603	-	100	91.626	ENSTBEG00000012734	-	100	91.626	Tupaia_belangeri
ENSCLAG00000006603	-	100	90.640	ENSTTRG00000011183	-	100	90.640	Tursiops_truncatus
ENSCLAG00000006603	-	67	84.444	ENSXETG00000020729	rab13	99	74.534	Xenopus_tropicalis
ENSCLAG00000006603	-	88	80.337	ENSXCOG00000019533	rab13	95	80.337	Xiphophorus_couchianus