EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000006605 (Gene tree)
Gene ID: 102023899
Gene Symbol: ZC3H6
Alias: FLJ41410|FLJ45877|KIAA2035|ZC3HDC6
Full Name: zinc finger CCCH-type containing 6
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 18500 bases
Position: chrJH721930.1:1825276-1843775
Accession: 102023899
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000009518	zf-CCCH	PF00642.24	5.6e-12	1	2
ENSCLAP00000009518	zf-CCCH	PF00642.24	5.6e-12	2	2
ENSCLAP00000009518	zf-CCCH_2	PF14608.6	1.1e-05	1	2
ENSCLAP00000009518	zf-CCCH_2	PF14608.6	1.1e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000009647	ZC3H6-201	3234	XM_013522790	ENSCLAP00000009518	1069 (aa)	XP_013378244	-

Gene Model

Click here to download ENSCLAG00000006605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006605's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000006605	ZC3H6	72	43.503	ENSCLAG00000001032	ZC3H4	82	34.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006605	ZC3H6	100	86.155	ENSG00000188177	ZC3H6	90	86.155	Homo_sapiens
ENSCLAG00000006605	ZC3H6	100	82.226	ENSAMEG00000016194	ZC3H6	90	82.226	Ailuropoda_melanoleuca
ENSCLAG00000006605	ZC3H6	68	67.876	ENSACIG00000021843	zc3h6	72	60.166	Amphilophus_citrinellus
ENSCLAG00000006605	ZC3H6	50	37.500	ENSAOCG00000004039	zc3h6	86	38.750	Amphiprion_ocellaris
ENSCLAG00000006605	ZC3H6	87	41.590	ENSATEG00000019063	zc3h6	74	51.170	Anabas_testudineus
ENSCLAG00000006605	ZC3H6	100	63.444	ENSAPLG00000014287	ZC3H6	90	63.812	Anas_platyrhynchos
ENSCLAG00000006605	ZC3H6	100	85.981	ENSANAG00000024229	ZC3H6	90	85.981	Aotus_nancymaae
ENSCLAG00000006605	ZC3H6	79	48.048	ENSACLG00000026343	zc3h6	73	53.086	Astatotilapia_calliptera
ENSCLAG00000006605	ZC3H6	100	86.262	ENSCJAG00000016479	ZC3H6	90	86.262	Callithrix_jacchus
ENSCLAG00000006605	ZC3H6	100	82.694	ENSCAFG00000007160	ZC3H6	90	81.279	Canis_familiaris
ENSCLAG00000006605	ZC3H6	100	81.665	ENSCAFG00020017525	ZC3H6	90	80.167	Canis_lupus_dingo
ENSCLAG00000006605	ZC3H6	88	79.171	ENSCHIG00000019719	-	95	77.077	Capra_hircus
ENSCLAG00000006605	ZC3H6	100	85.701	ENSTSYG00000031857	ZC3H6	90	85.888	Carlito_syrichta
ENSCLAG00000006605	ZC3H6	100	88.208	ENSCPOG00000003445	ZC3H6	90	88.868	Cavia_porcellus
ENSCLAG00000006605	ZC3H6	100	86.529	ENSCATG00000036595	ZC3H6	100	86.529	Cercocebus_atys
ENSCLAG00000006605	ZC3H6	100	86.436	ENSCSAG00000016793	ZC3H6	100	86.436	Chlorocebus_sabaeus
ENSCLAG00000006605	ZC3H6	100	86.436	ENSCANG00000041036	ZC3H6	91	86.436	Colobus_angolensis_palliatus
ENSCLAG00000006605	ZC3H6	100	76.657	ENSCGRG00001022022	Zc3h6	91	76.564	Cricetulus_griseus_chok1gshd
ENSCLAG00000006605	ZC3H6	100	77.477	ENSCGRG00000016162	Zc3h6	91	77.383	Cricetulus_griseus_crigri
ENSCLAG00000006605	ZC3H6	75	57.244	ENSCSEG00000012267	zc3h6	88	51.840	Cynoglossus_semilaevis
ENSCLAG00000006605	ZC3H6	100	73.433	ENSDNOG00000044811	ZC3H6	90	73.059	Dasypus_novemcinctus
ENSCLAG00000006605	ZC3H6	100	82.320	ENSDORG00000013967	Zc3h6	91	82.320	Dipodomys_ordii
ENSCLAG00000006605	ZC3H6	93	84.561	ENSEASG00005006493	ZC3H6	100	84.561	Equus_asinus_asinus
ENSCLAG00000006605	ZC3H6	100	84.939	ENSECAG00000023620	ZC3H6	90	84.939	Equus_caballus
ENSCLAG00000006605	ZC3H6	81	73.655	ENSEEUG00000013883	-	75	73.098	Erinaceus_europaeus
ENSCLAG00000006605	ZC3H6	100	83.910	ENSFCAG00000008089	ZC3H6	90	82.206	Felis_catus
ENSCLAG00000006605	ZC3H6	100	62.765	ENSFALG00000011589	ZC3H6	90	63.226	Ficedula_albicollis
ENSCLAG00000006605	ZC3H6	100	92.329	ENSFDAG00000002521	ZC3H6	90	92.049	Fukomys_damarensis
ENSCLAG00000006605	ZC3H6	100	62.823	ENSGALG00000008269	ZC3H6	88	62.662	Gallus_gallus
ENSCLAG00000006605	ZC3H6	67	62.694	ENSGAFG00000006771	zc3h6	72	62.694	Gambusia_affinis
ENSCLAG00000006605	ZC3H6	100	65.189	ENSGAGG00000010857	ZC3H6	91	65.374	Gopherus_agassizii
ENSCLAG00000006605	ZC3H6	100	86.529	ENSGGOG00000001665	ZC3H6	91	85.781	Gorilla_gorilla
ENSCLAG00000006605	ZC3H6	79	48.048	ENSHBUG00000010088	zc3h6	73	53.086	Haplochromis_burtoni
ENSCLAG00000006605	ZC3H6	100	92.516	ENSHGLG00000011882	ZC3H6	87	92.516	Heterocephalus_glaber_female
ENSCLAG00000006605	ZC3H6	100	89.710	ENSHGLG00100002559	ZC3H6	90	88.962	Heterocephalus_glaber_male
ENSCLAG00000006605	ZC3H6	100	82.694	ENSSTOG00000008120	-	100	82.226	Ictidomys_tridecemlineatus
ENSCLAG00000006605	ZC3H6	99	82.270	ENSJJAG00000013206	Zc3h6	90	82.176	Jaculus_jaculus
ENSCLAG00000006605	ZC3H6	69	63.380	ENSKMAG00000016252	zc3h6	76	49.444	Kryptolebias_marmoratus
ENSCLAG00000006605	ZC3H6	65	65.803	ENSLBEG00000003054	zc3h6	80	48.266	Labrus_bergylta
ENSCLAG00000006605	ZC3H6	98	50.045	ENSLACG00000012014	ZC3H6	89	50.000	Latimeria_chalumnae
ENSCLAG00000006605	ZC3H6	99	44.950	ENSLOCG00000016548	zc3h6	88	45.587	Lepisosteus_oculatus
ENSCLAG00000006605	ZC3H6	100	78.525	ENSLAFG00000001151	ZC3H6	96	77.965	Loxodonta_africana
ENSCLAG00000006605	ZC3H6	100	86.436	ENSMFAG00000036963	ZC3H6	90	86.436	Macaca_fascicularis
ENSCLAG00000006605	ZC3H6	100	86.342	ENSMMUG00000016430	ZC3H6	90	86.342	Macaca_mulatta
ENSCLAG00000006605	ZC3H6	100	86.155	ENSMNEG00000031225	ZC3H6	100	86.155	Macaca_nemestrina
ENSCLAG00000006605	ZC3H6	100	86.623	ENSMLEG00000038821	ZC3H6	90	86.623	Mandrillus_leucophaeus
ENSCLAG00000006605	ZC3H6	87	41.496	ENSMAMG00000021546	zc3h6	86	40.288	Mastacembelus_armatus
ENSCLAG00000006605	ZC3H6	79	48.048	ENSMZEG00005006828	zc3h6	73	53.086	Maylandia_zebra
ENSCLAG00000006605	ZC3H6	100	63.192	ENSMGAG00000003025	ZC3H6	90	63.031	Meleagris_gallopavo
ENSCLAG00000006605	ZC3H6	100	77.664	ENSMAUG00000017009	Zc3h6	90	77.570	Mesocricetus_auratus
ENSCLAG00000006605	ZC3H6	100	86.249	ENSMICG00000036353	ZC3H6	90	86.249	Microcebus_murinus
ENSCLAG00000006605	ZC3H6	100	75.794	ENSMOCG00000002054	Zc3h6	90	75.701	Microtus_ochrogaster
ENSCLAG00000006605	ZC3H6	100	68.324	ENSMODG00000006612	ZC3H6	91	68.324	Monodelphis_domestica
ENSCLAG00000006605	ZC3H6	74	57.993	ENSMALG00000002048	zc3h6	73	58.431	Monopterus_albus
ENSCLAG00000006605	ZC3H6	100	74.323	MGP_CAROLIEiJ_G0024278	Zc3h6	90	74.230	Mus_caroli
ENSCLAG00000006605	ZC3H6	100	74.416	ENSMUSG00000042851	Zc3h6	90	74.323	Mus_musculus
ENSCLAG00000006605	ZC3H6	99	74.299	MGP_PahariEiJ_G0025723	Zc3h6	90	74.019	Mus_pahari
ENSCLAG00000006605	ZC3H6	100	74.603	MGP_SPRETEiJ_G0025198	Zc3h6	90	74.510	Mus_spretus
ENSCLAG00000006605	ZC3H6	100	83.255	ENSMPUG00000009624	ZC3H6	100	81.835	Mustela_putorius_furo
ENSCLAG00000006605	ZC3H6	100	78.578	ENSMLUG00000004896	ZC3H6	90	79.139	Myotis_lucifugus
ENSCLAG00000006605	ZC3H6	100	80.168	ENSNGAG00000013596	Zc3h6	95	79.888	Nannospalax_galili
ENSCLAG00000006605	ZC3H6	65	68.229	ENSNBRG00000015382	zc3h6	70	60.996	Neolamprologus_brichardi
ENSCLAG00000006605	ZC3H6	100	85.781	ENSNLEG00000033657	ZC3H6	90	85.781	Nomascus_leucogenys
ENSCLAG00000006605	ZC3H6	100	77.268	ENSOPRG00000012717	ZC3H6	90	77.175	Ochotona_princeps
ENSCLAG00000006605	ZC3H6	100	91.394	ENSODEG00000009099	ZC3H6	95	91.394	Octodon_degus
ENSCLAG00000006605	ZC3H6	69	64.929	ENSONIG00000009880	zc3h6	77	48.593	Oreochromis_niloticus
ENSCLAG00000006605	ZC3H6	100	68.406	ENSOANG00000012054	-	92	68.144	Ornithorhynchus_anatinus
ENSCLAG00000006605	ZC3H6	100	84.500	ENSOCUG00000011125	ZC3H6	100	84.500	Oryctolagus_cuniculus
ENSCLAG00000006605	ZC3H6	75	52.921	ENSOMEG00000001296	zc3h6	75	52.679	Oryzias_melastigma
ENSCLAG00000006605	ZC3H6	100	83.536	ENSOGAG00000002556	ZC3H6	91	83.536	Otolemur_garnettii
ENSCLAG00000006605	ZC3H6	100	80.280	ENSOARG00000014503	ZC3H6	90	78.426	Ovis_aries
ENSCLAG00000006605	ZC3H6	100	86.342	ENSPPAG00000030495	ZC3H6	91	86.342	Pan_paniscus
ENSCLAG00000006605	ZC3H6	100	83.910	ENSPPRG00000005673	ZC3H6	90	82.298	Panthera_pardus
ENSCLAG00000006605	ZC3H6	100	82.788	ENSPTIG00000015800	ZC3H6	90	81.094	Panthera_tigris_altaica
ENSCLAG00000006605	ZC3H6	100	86.436	ENSPTRG00000012363	ZC3H6	90	86.436	Pan_troglodytes
ENSCLAG00000006605	ZC3H6	100	86.436	ENSPANG00000025224	ZC3H6	90	86.436	Papio_anubis
ENSCLAG00000006605	ZC3H6	68	68.229	ENSPKIG00000007353	zc3h6	82	61.864	Paramormyrops_kingsleyae
ENSCLAG00000006605	ZC3H6	100	65.498	ENSPSIG00000002520	ZC3H6	91	65.683	Pelodiscus_sinensis
ENSCLAG00000006605	ZC3H6	100	75.255	ENSPEMG00000000918	Zc3h6	91	75.255	Peromyscus_maniculatus_bairdii
ENSCLAG00000006605	ZC3H6	100	70.768	ENSPCIG00000029741	ZC3H6	100	70.768	Phascolarctos_cinereus
ENSCLAG00000006605	ZC3H6	67	66.667	ENSPFOG00000015748	zc3h6	75	52.632	Poecilia_formosa
ENSCLAG00000006605	ZC3H6	87	38.788	ENSPLAG00000002469	zc3h6	87	38.530	Poecilia_latipinna
ENSCLAG00000006605	ZC3H6	67	67.380	ENSPMEG00000020802	zc3h6	83	67.380	Poecilia_mexicana
ENSCLAG00000006605	ZC3H6	69	63.592	ENSPREG00000023126	zc3h6	78	57.143	Poecilia_reticulata
ENSCLAG00000006605	ZC3H6	84	75.531	ENSPCAG00000015468	ZC3H6	75	74.749	Procavia_capensis
ENSCLAG00000006605	ZC3H6	100	85.968	ENSPCOG00000016627	ZC3H6	90	85.968	Propithecus_coquereli
ENSCLAG00000006605	ZC3H6	67	72.245	ENSPVAG00000013728	ZC3H6	61	70.204	Pteropus_vampyrus
ENSCLAG00000006605	ZC3H6	67	68.229	ENSPNYG00000018130	zc3h6	73	60.581	Pundamilia_nyererei
ENSCLAG00000006605	ZC3H6	87	42.958	ENSPNAG00000009331	zc3h6	88	40.777	Pygocentrus_nattereri
ENSCLAG00000006605	ZC3H6	99	75.327	ENSRNOG00000026277	Zc3h6	90	75.234	Rattus_norvegicus
ENSCLAG00000006605	ZC3H6	100	86.355	ENSSBOG00000033489	ZC3H6	100	86.355	Saimiri_boliviensis_boliviensis
ENSCLAG00000006605	ZC3H6	92	69.478	ENSSHAG00000016634	ZC3H6	100	69.478	Sarcophilus_harrisii
ENSCLAG00000006605	ZC3H6	99	40.853	ENSSFOG00015004488	zc3h6	88	40.675	Scleropages_formosus
ENSCLAG00000006605	ZC3H6	67	67.016	ENSSMAG00000008411	zc3h6	74	48.179	Scophthalmus_maximus
ENSCLAG00000006605	ZC3H6	100	78.578	ENSSARG00000001035	ZC3H6	91	78.578	Sorex_araneus
ENSCLAG00000006605	ZC3H6	62	57.364	ENSSPUG00000013031	-	75	35.192	Sphenodon_punctatus
ENSCLAG00000006605	ZC3H6	100	84.471	ENSSSCG00000008096	ZC3H6	90	84.471	Sus_scrofa
ENSCLAG00000006605	ZC3H6	100	62.731	ENSTGUG00000007468	ZC3H6	90	63.192	Taeniopygia_guttata
ENSCLAG00000006605	ZC3H6	82	46.518	ENSTRUG00000012901	zc3h6	78	47.512	Takifugu_rubripes
ENSCLAG00000006605	ZC3H6	99	39.450	ENSTNIG00000016608	zc3h6	83	54.577	Tetraodon_nigroviridis
ENSCLAG00000006605	ZC3H6	92	86.364	ENSTBEG00000016232	ZC3H6	88	86.364	Tupaia_belangeri
ENSCLAG00000006605	ZC3H6	75	88.439	ENSTTRG00000013154	ZC3H6	67	88.713	Tursiops_truncatus
ENSCLAG00000006605	ZC3H6	100	82.320	ENSUAMG00000002401	ZC3H6	100	80.908	Ursus_americanus
ENSCLAG00000006605	ZC3H6	100	82.413	ENSUMAG00000008663	ZC3H6	100	81.001	Ursus_maritimus
ENSCLAG00000006605	ZC3H6	100	80.748	ENSVPAG00000005912	ZC3H6	91	79.889	Vicugna_pacos
ENSCLAG00000006605	ZC3H6	100	82.694	ENSVVUG00000028662	ZC3H6	100	81.279	Vulpes_vulpes
ENSCLAG00000006605	ZC3H6	87	61.719	ENSXETG00000013762	zc3h6	83	63.598	Xenopus_tropicalis
ENSCLAG00000006605	ZC3H6	57	63.592	ENSXCOG00000011662	zc3h6	72	56.015	Xiphophorus_couchianus
ENSCLAG00000006605	ZC3H6	67	66.667	ENSXMAG00000020822	zc3h6	74	52.322	Xiphophorus_maculatus