EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCLAG00000006618 (Gene tree)
Gene ID
102020838
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Chinchilla_lanigera
Status
putative
Strand
Minus strand
Length
41978 bases
Position
chrJH721895.1:18008352-18050329
Accession
102020838
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCLAP00000009543CSDPF00313.221.8e-8515
ENSCLAP00000009543CSDPF00313.221.8e-8525
ENSCLAP00000009543CSDPF00313.221.8e-8535
ENSCLAP00000009543CSDPF00313.221.8e-8545
ENSCLAP00000009543CSDPF00313.221.8e-8555
ENSCLAP00000009542CSDPF00313.222.9e-8515
ENSCLAP00000009542CSDPF00313.222.9e-8525
ENSCLAP00000009542CSDPF00313.222.9e-8535
ENSCLAP00000009542CSDPF00313.222.9e-8545
ENSCLAP00000009542CSDPF00313.222.9e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCLAT00000009671CSDE1-2014511XM_005389008ENSCLAP00000009542798 (aa)XP_005389065UPI00038ECEDC
ENSCLAT00000009672CSDE1-2024437XM_005389009ENSCLAP00000009543767 (aa)XP_005389066UPI00038EA0F6
Gene Model
Click here to download ENSCLAG00000006618's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006618's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCLAG00000006618CSDE110098.747ENSG00000009307CSDE1100100.000Homo_sapiens
ENSCLAG00000006618CSDE110077.922ENSAPOG00000015538csde110077.922Acanthochromis_polyacanthus
ENSCLAG00000006618CSDE110097.914ENSAMEG00000017129CSDE19497.914Ailuropoda_melanoleuca
ENSCLAG00000006618CSDE19177.027ENSACIG00000015175csde110077.027Amphilophus_citrinellus
ENSCLAG00000006618CSDE110078.052ENSAOCG00000011510csde110078.052Amphiprion_ocellaris
ENSCLAG00000006618CSDE110078.052ENSAPEG00000007194csde110078.052Amphiprion_percula
ENSCLAG00000006618CSDE110077.662ENSATEG00000003864csde110077.662Anabas_testudineus
ENSCLAG00000006618CSDE110091.786ENSAPLG00000008797CSDE110091.786Anas_platyrhynchos
ENSCLAG00000006618CSDE110091.980ENSACAG00000003120CSDE110091.980Anolis_carolinensis
ENSCLAG00000006618CSDE19373.404ENSANAG00000028396-9174.150Aotus_nancymaae
ENSCLAG00000006618CSDE110098.435ENSANAG00000024665CSDE19598.435Aotus_nancymaae
ENSCLAG00000006618CSDE110077.503ENSACLG00000013296csde110077.503Astatotilapia_calliptera
ENSCLAG00000006618CSDE110077.173ENSAMXG00000007436csde110077.173Astyanax_mexicanus
ENSCLAG00000006618CSDE110098.371ENSBTAG00000000678CSDE110098.305Bos_taurus
ENSCLAG00000006618CSDE110098.496ENSCJAG00000012565CSDE19598.496Callithrix_jacchus
ENSCLAG00000006618CSDE19898.803ENSCAFG00000009618CSDE19498.803Canis_familiaris
ENSCLAG00000006618CSDE110098.827ENSCAFG00020000481CSDE110098.827Canis_lupus_dingo
ENSCLAG00000006618CSDE110098.371ENSCHIG00000017250CSDE110098.305Capra_hircus
ENSCLAG00000006618CSDE110098.622ENSTSYG00000003747CSDE110098.622Carlito_syrichta
ENSCLAG00000006618CSDE110093.567ENSCAPG00000015128CSDE110093.567Cavia_aperea
ENSCLAG00000006618CSDE110094.612ENSCPOG00000040388CSDE110094.612Cavia_porcellus
ENSCLAG00000006618CSDE19575.990ENSCCAG00000033677-9975.534Cebus_capucinus
ENSCLAG00000006618CSDE110098.496ENSCCAG00000036794CSDE110098.496Cebus_capucinus
ENSCLAG00000006618CSDE19673.274ENSCCAG00000030878-9173.274Cebus_capucinus
ENSCLAG00000006618CSDE110098.747ENSCATG00000036962CSDE19898.812Cercocebus_atys
ENSCLAG00000006618CSDE110098.747ENSCSAG00000001658CSDE19598.747Chlorocebus_sabaeus
ENSCLAG00000006618CSDE110098.466ENSCHOG00000000918CSDE18598.466Choloepus_hoffmanni
ENSCLAG00000006618CSDE110092.356ENSCPBG00000016547CSDE110092.356Chrysemys_picta_bellii
ENSCLAG00000006618CSDE19742.787ENSCING00000014465-9642.787Ciona_intestinalis
ENSCLAG00000006618CSDE19642.503ENSCSAVG00000008100-9842.503Ciona_savignyi
ENSCLAG00000006618CSDE110098.747ENSCANG00000035096CSDE19898.812Colobus_angolensis_palliatus
ENSCLAG00000006618CSDE19993.186ENSCANG00000031069-10093.053Colobus_angolensis_palliatus
ENSCLAG00000006618CSDE110098.622ENSCGRG00001016833-10098.622Cricetulus_griseus_chok1gshd
ENSCLAG00000006618CSDE110081.486ENSCGRG00001014011-10081.486Cricetulus_griseus_chok1gshd
ENSCLAG00000006618CSDE110085.652ENSCGRG00000005831-10085.652Cricetulus_griseus_crigri
ENSCLAG00000006618CSDE19797.996ENSCGRG00000002225-10097.996Cricetulus_griseus_crigri
ENSCLAG00000006618CSDE110077.763ENSCSEG00000002620csde110077.763Cynoglossus_semilaevis
ENSCLAG00000006618CSDE110076.883ENSCVAG00000001344csde110076.883Cyprinodon_variegatus
ENSCLAG00000006618CSDE110077.778ENSDARG00000074758csde110077.778Danio_rerio
ENSCLAG00000006618CSDE18070.722ENSDNOG00000034464-10072.174Dasypus_novemcinctus
ENSCLAG00000006618CSDE110098.307ENSDNOG00000010287-9398.307Dasypus_novemcinctus
ENSCLAG00000006618CSDE110098.120ENSDORG00000011609Csde110098.120Dipodomys_ordii
ENSCLAG00000006618CSDE19748.156FBgn0263352Unr7348.795Drosophila_melanogaster
ENSCLAG00000006618CSDE19398.347ENSETEG00000002491-7498.347Echinops_telfairi
ENSCLAG00000006618CSDE19976.893ENSETEG00000013678-9976.893Echinops_telfairi
ENSCLAG00000006618CSDE17968.377ENSETEG00000007109-9968.377Echinops_telfairi
ENSCLAG00000006618CSDE19086.867ENSETEG00000006280-10086.867Echinops_telfairi
ENSCLAG00000006618CSDE19955.897ENSEBUG00000008647csde19954.167Eptatretus_burgeri
ENSCLAG00000006618CSDE110099.123ENSEASG00005006284CSDE110099.123Equus_asinus_asinus
ENSCLAG00000006618CSDE110099.123ENSECAG00000020885CSDE110099.123Equus_caballus
ENSCLAG00000006618CSDE19299.476ENSEEUG00000006286CSDE16899.476Erinaceus_europaeus
ENSCLAG00000006618CSDE110076.326ENSELUG00000015507csde110076.326Esox_lucius
ENSCLAG00000006618CSDE110099.123ENSFCAG00000029266CSDE110099.087Felis_catus
ENSCLAG00000006618CSDE110092.356ENSFALG00000003407CSDE110092.356Ficedula_albicollis
ENSCLAG00000006618CSDE110099.123ENSFDAG00000007882CSDE110099.123Fukomys_damarensis
ENSCLAG00000006618CSDE110076.904ENSFHEG00000010799csde110076.904Fundulus_heteroclitus
ENSCLAG00000006618CSDE19977.096ENSGMOG00000012731csde110077.096Gadus_morhua
ENSCLAG00000006618CSDE19892.072ENSGALG00000002139CSDE19892.072Gallus_gallus
ENSCLAG00000006618CSDE19276.524ENSGAFG00000005241csde19576.524Gambusia_affinis
ENSCLAG00000006618CSDE19978.000ENSGACG00000004544csde110078.000Gasterosteus_aculeatus
ENSCLAG00000006618CSDE110091.980ENSGAGG00000017685CSDE110091.980Gopherus_agassizii
ENSCLAG00000006618CSDE110098.747ENSGGOG00000002164CSDE110098.696Gorilla_gorilla
ENSCLAG00000006618CSDE110077.503ENSHBUG00000020315csde110077.503Haplochromis_burtoni
ENSCLAG00000006618CSDE110082.456ENSHGLG00000019549-10082.456Heterocephalus_glaber_female
ENSCLAG00000006618CSDE19980.552ENSHGLG00000000650-9980.552Heterocephalus_glaber_female
ENSCLAG00000006618CSDE19989.978ENSHGLG00000010039-10089.978Heterocephalus_glaber_female
ENSCLAG00000006618CSDE110089.599ENSHGLG00000009620-10089.850Heterocephalus_glaber_female
ENSCLAG00000006618CSDE19989.458ENSHGLG00000008555-10089.371Heterocephalus_glaber_female
ENSCLAG00000006618CSDE19985.677ENSHGLG00000007471-9885.677Heterocephalus_glaber_female
ENSCLAG00000006618CSDE110089.570ENSHGLG00000003829-10089.570Heterocephalus_glaber_female
ENSCLAG00000006618CSDE19989.755ENSHGLG00100006910-10089.755Heterocephalus_glaber_male
ENSCLAG00000006618CSDE19984.856ENSHGLG00100002245-9984.856Heterocephalus_glaber_male
ENSCLAG00000006618CSDE19983.049ENSHGLG00100007287-9883.049Heterocephalus_glaber_male
ENSCLAG00000006618CSDE110080.339ENSHGLG00100001846-10080.339Heterocephalus_glaber_male
ENSCLAG00000006618CSDE110099.248ENSHGLG00100019438-10099.248Heterocephalus_glaber_male
ENSCLAG00000006618CSDE110084.746ENSHGLG00100012072-10084.746Heterocephalus_glaber_male
ENSCLAG00000006618CSDE19384.240ENSHGLG00100004195-10084.240Heterocephalus_glaber_male
ENSCLAG00000006618CSDE19982.183ENSHGLG00100004833-10082.183Heterocephalus_glaber_male
ENSCLAG00000006618CSDE110076.593ENSHCOG00000004158csde110076.593Hippocampus_comes
ENSCLAG00000006618CSDE110077.173ENSIPUG00000000355csde110077.173Ictalurus_punctatus
ENSCLAG00000006618CSDE19093.007ENSSTOG00000032722-9893.007Ictidomys_tridecemlineatus
ENSCLAG00000006618CSDE110080.563ENSSTOG00000030994-10080.563Ictidomys_tridecemlineatus
ENSCLAG00000006618CSDE110098.371ENSJJAG00000019571Csde110098.371Jaculus_jaculus
ENSCLAG00000006618CSDE110076.770ENSKMAG00000005685csde110076.391Kryptolebias_marmoratus
ENSCLAG00000006618CSDE110077.662ENSLBEG00000014770csde110077.662Labrus_bergylta
ENSCLAG00000006618CSDE110080.149ENSLACG00000018452CSDE19480.149Latimeria_chalumnae
ENSCLAG00000006618CSDE110080.350ENSLOCG00000010413csde19480.350Lepisosteus_oculatus
ENSCLAG00000006618CSDE110097.132ENSLAFG00000007150CSDE19697.132Loxodonta_africana
ENSCLAG00000006618CSDE110098.747ENSMFAG00000003674CSDE110098.696Macaca_fascicularis
ENSCLAG00000006618CSDE110098.747ENSMMUG00000001974CSDE110098.696Macaca_mulatta
ENSCLAG00000006618CSDE110098.747ENSMNEG00000045247CSDE19898.812Macaca_nemestrina
ENSCLAG00000006618CSDE110098.496ENSMLEG00000038673CSDE19598.496Mandrillus_leucophaeus
ENSCLAG00000006618CSDE110078.442ENSMAMG00000008821csde110078.442Mastacembelus_armatus
ENSCLAG00000006618CSDE110077.503ENSMZEG00005021675csde110077.503Maylandia_zebra
ENSCLAG00000006618CSDE110091.536ENSMGAG00000016381CSDE110091.536Meleagris_gallopavo
ENSCLAG00000006618CSDE110098.622ENSMAUG00000014031Csde110098.622Mesocricetus_auratus
ENSCLAG00000006618CSDE110098.175ENSMICG00000002050CSDE19998.661Microcebus_murinus
ENSCLAG00000006618CSDE110098.622ENSMOCG00000018960Csde110098.622Microtus_ochrogaster
ENSCLAG00000006618CSDE110077.792ENSMMOG00000015075csde110077.792Mola_mola
ENSCLAG00000006618CSDE110095.990ENSMODG00000004685CSDE110095.990Monodelphis_domestica
ENSCLAG00000006618CSDE110078.052ENSMALG00000007132csde110078.052Monopterus_albus
ENSCLAG00000006618CSDE110098.371MGP_CAROLIEiJ_G0025444Csde110098.371Mus_caroli
ENSCLAG00000006618CSDE110098.496ENSMUSG00000068823Csde110098.496Mus_musculus
ENSCLAG00000006618CSDE110098.747MGP_PahariEiJ_G0026888Csde110098.747Mus_pahari
ENSCLAG00000006618CSDE110098.747MGP_SPRETEiJ_G0026394Csde110098.747Mus_spretus
ENSCLAG00000006618CSDE19899.106ENSMPUG00000005753CSDE19999.106Mustela_putorius_furo
ENSCLAG00000006618CSDE110097.784ENSMLUG00000005681CSDE19497.784Myotis_lucifugus
ENSCLAG00000006618CSDE110098.622ENSNGAG00000021929Csde110098.622Nannospalax_galili
ENSCLAG00000006618CSDE19771.047ENSNGAG00000012599-10071.047Nannospalax_galili
ENSCLAG00000006618CSDE110077.503ENSNBRG00000020808csde110077.503Neolamprologus_brichardi
ENSCLAG00000006618CSDE110098.622ENSNLEG00000004842CSDE19798.566Nomascus_leucogenys
ENSCLAG00000006618CSDE19897.087ENSMEUG00000002677CSDE19697.087Notamacropus_eugenii
ENSCLAG00000006618CSDE19896.117ENSOPRG00000005002CSDE18294.048Ochotona_princeps
ENSCLAG00000006618CSDE110099.123ENSODEG00000007383-10099.123Octodon_degus
ENSCLAG00000006618CSDE19768.363ENSODEG00000005979-9868.363Octodon_degus
ENSCLAG00000006618CSDE110075.336ENSONIG00000009309csde110075.336Oreochromis_niloticus
ENSCLAG00000006618CSDE110080.175ENSOANG00000003346-10080.175Ornithorhynchus_anatinus
ENSCLAG00000006618CSDE110097.995ENSOCUG00000016438CSDE19597.995Oryctolagus_cuniculus
ENSCLAG00000006618CSDE110077.633ENSORLG00000000707csde110077.633Oryzias_latipes
ENSCLAG00000006618CSDE110077.125ENSORLG00020005148csde110075.336Oryzias_latipes_hni
ENSCLAG00000006618CSDE110077.633ENSORLG00015019415csde110077.633Oryzias_latipes_hsok
ENSCLAG00000006618CSDE110078.442ENSOMEG00000015656csde110078.442Oryzias_melastigma
ENSCLAG00000006618CSDE110098.957ENSOGAG00000012127CSDE19498.957Otolemur_garnettii
ENSCLAG00000006618CSDE110098.435ENSOARG00000020034CSDE19498.435Ovis_aries
ENSCLAG00000006618CSDE110098.747ENSPPAG00000025861CSDE110098.696Pan_paniscus
ENSCLAG00000006618CSDE110099.123ENSPPRG00000006747CSDE19599.123Panthera_pardus
ENSCLAG00000006618CSDE110099.123ENSPTIG00000015468CSDE110099.123Panthera_tigris_altaica
ENSCLAG00000006618CSDE110098.747ENSPTRG00000033721CSDE110098.747Pan_troglodytes
ENSCLAG00000006618CSDE110098.747ENSPANG00000018873CSDE110098.696Papio_anubis
ENSCLAG00000006618CSDE110077.503ENSPKIG00000009459csde110077.503Paramormyrops_kingsleyae
ENSCLAG00000006618CSDE19695.354ENSPSIG00000003823CSDE19695.354Pelodiscus_sinensis
ENSCLAG00000006618CSDE110077.403ENSPMGG00000000772csde110077.403Periophthalmus_magnuspinnatus
ENSCLAG00000006618CSDE110098.872ENSPEMG00000020357-10098.872Peromyscus_maniculatus_bairdii
ENSCLAG00000006618CSDE110096.115ENSPCIG00000022587CSDE110096.115Phascolarctos_cinereus
ENSCLAG00000006618CSDE19975.466ENSPFOG00000012664csde110075.932Poecilia_formosa
ENSCLAG00000006618CSDE19771.429ENSPLAG00000017680csde19371.429Poecilia_latipinna
ENSCLAG00000006618CSDE19871.320ENSPMEG00000005094csde19671.320Poecilia_mexicana
ENSCLAG00000006618CSDE110076.273ENSPREG00000011631csde110074.038Poecilia_reticulata
ENSCLAG00000006618CSDE110098.622ENSPPYG00000000996CSDE110098.622Pongo_abelii
ENSCLAG00000006618CSDE110098.257ENSPCAG00000014368CSDE19098.257Procavia_capensis
ENSCLAG00000006618CSDE19084.328ENSPCOG00000008223-9084.328Propithecus_coquereli
ENSCLAG00000006618CSDE110098.696ENSPCOG00000017893CSDE110098.696Propithecus_coquereli
ENSCLAG00000006618CSDE110092.829ENSPVAG00000008225CSDE19592.829Pteropus_vampyrus
ENSCLAG00000006618CSDE110077.503ENSPNYG00000013745csde110077.503Pundamilia_nyererei
ENSCLAG00000006618CSDE110077.662ENSPNAG00000001958csde110077.662Pygocentrus_nattereri
ENSCLAG00000006618CSDE110098.622ENSRNOG00000061058Csde110098.622Rattus_norvegicus
ENSCLAG00000006618CSDE110094.922ENSRBIG00000038088-9997.005Rhinopithecus_bieti
ENSCLAG00000006618CSDE110093.108ENSRBIG00000038966-9493.108Rhinopithecus_bieti
ENSCLAG00000006618CSDE110098.747ENSRROG00000043101CSDE19898.578Rhinopithecus_roxellana
ENSCLAG00000006618CSDE110098.496ENSSBOG00000035592CSDE19598.496Saimiri_boliviensis_boliviensis
ENSCLAG00000006618CSDE110095.828ENSSHAG00000009831CSDE110095.828Sarcophilus_harrisii
ENSCLAG00000006618CSDE110077.633ENSSFOG00015007498csde110077.633Scleropages_formosus
ENSCLAG00000006618CSDE110078.442ENSSMAG00000007203csde110078.442Scophthalmus_maximus
ENSCLAG00000006618CSDE110077.792ENSSDUG00000015380csde110077.792Seriola_dumerili
ENSCLAG00000006618CSDE110077.792ENSSLDG00000008819csde110077.792Seriola_lalandi_dorsalis
ENSCLAG00000006618CSDE110097.914ENSSARG00000000738CSDE19497.914Sorex_araneus
ENSCLAG00000006618CSDE110091.604ENSSPUG00000008714CSDE110091.604Sphenodon_punctatus
ENSCLAG00000006618CSDE110077.792ENSSPAG00000000716csde110077.792Stegastes_partitus
ENSCLAG00000006618CSDE110099.123ENSSSCG00000006752CSDE110099.087Sus_scrofa
ENSCLAG00000006618CSDE110091.375ENSTGUG00000000972CSDE110091.375Taeniopygia_guttata
ENSCLAG00000006618CSDE110075.033ENSTRUG00000007996csde110075.033Takifugu_rubripes
ENSCLAG00000006618CSDE19381.369ENSTNIG00000010878csde110081.369Tetraodon_nigroviridis
ENSCLAG00000006618CSDE19398.718ENSTBEG00000011880-6298.773Tupaia_belangeri
ENSCLAG00000006618CSDE110098.044ENSTTRG00000015583CSDE19498.044Tursiops_truncatus
ENSCLAG00000006618CSDE18999.349ENSUAMG00000021779-10099.035Ursus_americanus
ENSCLAG00000006618CSDE18994.203ENSUAMG00000024289-9994.203Ursus_americanus
ENSCLAG00000006618CSDE110091.265ENSUMAG00000009720-9791.265Ursus_maritimus
ENSCLAG00000006618CSDE19799.287ENSUMAG00000011714-9999.287Ursus_maritimus
ENSCLAG00000006618CSDE110098.592ENSVPAG00000000749CSDE17998.592Vicugna_pacos
ENSCLAG00000006618CSDE19098.684ENSVVUG00000009890CSDE19498.684Vulpes_vulpes
ENSCLAG00000006618CSDE110085.893ENSXETG00000021448csde110085.893Xenopus_tropicalis
ENSCLAG00000006618CSDE19285.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSCLAG00000006618CSDE110077.500ENSXMAG00000009080csde19877.851Xiphophorus_maculatus

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