EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000006622 (Gene tree)
Gene ID: 102017719
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 92539 bases
Position: chrJH721906.1:12270344-12362882
Accession: 102017719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000009548	rRNA_proc-arch	PF13234.6	3.1e-87	1	1
ENSCLAP00000009548	DEAD	PF00270.29	4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000009677	MTREX-201	7540	XM_005392698	ENSCLAP00000009548	1042 (aa)	XP_005392755	UPI00038ED2B0

Gene Model

Click here to download ENSCLAG00000006622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006622's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000006622	MTREX	88	36.886	ENSCLAG00000007678	SKIV2L	76	36.886

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006622	MTREX	100	97.985	ENSG00000039123	MTREX	100	97.985	Homo_sapiens
ENSCLAG00000006622	MTREX	100	83.333	ENSAPOG00000007814	mtrex	100	83.111	Acanthochromis_polyacanthus
ENSCLAG00000006622	MTREX	100	97.891	ENSAMEG00000013856	MTREX	100	97.891	Ailuropoda_melanoleuca
ENSCLAG00000006622	MTREX	91	87.879	ENSACIG00000015117	mtrex	96	87.879	Amphilophus_citrinellus
ENSCLAG00000006622	MTREX	100	83.429	ENSAOCG00000011884	mtrex	100	83.429	Amphiprion_ocellaris
ENSCLAG00000006622	MTREX	100	83.333	ENSAPEG00000019384	mtrex	100	83.333	Amphiprion_percula
ENSCLAG00000006622	MTREX	100	84.175	ENSATEG00000015117	mtrex	100	84.080	Anabas_testudineus
ENSCLAG00000006622	MTREX	95	92.720	ENSAPLG00000009694	MTREX	99	92.720	Anas_platyrhynchos
ENSCLAG00000006622	MTREX	100	91.075	ENSACAG00000015200	MTREX	96	90.979	Anolis_carolinensis
ENSCLAG00000006622	MTREX	100	98.177	ENSANAG00000023095	MTREX	100	98.177	Aotus_nancymaae
ENSCLAG00000006622	MTREX	100	82.667	ENSACLG00000001921	mtrex	100	82.729	Astatotilapia_calliptera
ENSCLAG00000006622	MTREX	97	81.925	ENSAMXG00000018751	mtrex	99	83.735	Astyanax_mexicanus
ENSCLAG00000006622	MTREX	100	97.601	ENSBTAG00000010518	MTREX	100	97.601	Bos_taurus
ENSCLAG00000006622	MTREX	91	53.628	WBGene00012342	mtr-4	94	53.196	Caenorhabditis_elegans
ENSCLAG00000006622	MTREX	100	97.233	ENSCJAG00000001773	MTREX	100	97.233	Callithrix_jacchus
ENSCLAG00000006622	MTREX	100	97.985	ENSCAFG00000006818	MTREX	100	97.985	Canis_familiaris
ENSCLAG00000006622	MTREX	100	97.985	ENSCAFG00020024352	MTREX	100	97.985	Canis_lupus_dingo
ENSCLAG00000006622	MTREX	100	97.793	ENSCHIG00000024413	MTREX	100	97.793	Capra_hircus
ENSCLAG00000006622	MTREX	94	97.846	ENSTSYG00000007389	MTREX	100	97.846	Carlito_syrichta
ENSCLAG00000006622	MTREX	96	74.248	ENSCAPG00000008696	MTREX	100	74.248	Cavia_aperea
ENSCLAG00000006622	MTREX	100	98.752	ENSCPOG00000009797	MTREX	100	98.752	Cavia_porcellus
ENSCLAG00000006622	MTREX	100	98.081	ENSCCAG00000014177	MTREX	100	98.081	Cebus_capucinus
ENSCLAG00000006622	MTREX	100	97.985	ENSCATG00000042153	MTREX	100	97.985	Cercocebus_atys
ENSCLAG00000006622	MTREX	100	93.493	ENSCSAG00000016445	MTREX	100	93.493	Chlorocebus_sabaeus
ENSCLAG00000006622	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSCLAG00000006622	MTREX	100	92.042	ENSCPBG00000026551	MTREX	94	91.874	Chrysemys_picta_bellii
ENSCLAG00000006622	MTREX	99	66.603	ENSCING00000003239	-	99	66.603	Ciona_intestinalis
ENSCLAG00000006622	MTREX	99	65.744	ENSCSAVG00000009304	-	100	70.108	Ciona_savignyi
ENSCLAG00000006622	MTREX	100	97.889	ENSCANG00000035770	MTREX	100	97.889	Colobus_angolensis_palliatus
ENSCLAG00000006622	MTREX	100	96.929	ENSCGRG00001024680	Mtrex	100	96.929	Cricetulus_griseus_chok1gshd
ENSCLAG00000006622	MTREX	100	96.929	ENSCGRG00000000307	Mtrex	100	96.929	Cricetulus_griseus_crigri
ENSCLAG00000006622	MTREX	100	81.948	ENSCSEG00000018621	mtrex	98	81.948	Cynoglossus_semilaevis
ENSCLAG00000006622	MTREX	100	83.763	ENSCVAG00000004556	mtrex	100	83.763	Cyprinodon_variegatus
ENSCLAG00000006622	MTREX	100	84.527	ENSDARG00000013457	mtrex	100	84.527	Danio_rerio
ENSCLAG00000006622	MTREX	100	96.367	ENSDNOG00000015375	MTREX	100	96.080	Dasypus_novemcinctus
ENSCLAG00000006622	MTREX	100	97.217	ENSDORG00000006782	Mtrex	100	97.217	Dipodomys_ordii
ENSCLAG00000006622	MTREX	99	62.994	FBgn0001986	Mtr4	97	64.016	Drosophila_melanogaster
ENSCLAG00000006622	MTREX	90	80.055	ENSETEG00000000727	MTREX	90	80.055	Echinops_telfairi
ENSCLAG00000006622	MTREX	99	74.302	ENSEBUG00000012869	mtrex	99	73.946	Eptatretus_burgeri
ENSCLAG00000006622	MTREX	100	97.409	ENSEASG00005013270	MTREX	100	97.409	Equus_asinus_asinus
ENSCLAG00000006622	MTREX	100	97.505	ENSECAG00000023723	MTREX	100	99.074	Equus_caballus
ENSCLAG00000006622	MTREX	98	88.293	ENSEEUG00000000527	MTREX	100	88.293	Erinaceus_europaeus
ENSCLAG00000006622	MTREX	98	84.966	ENSELUG00000004898	mtrex	100	89.601	Esox_lucius
ENSCLAG00000006622	MTREX	100	97.793	ENSFCAG00000010575	MTREX	100	97.793	Felis_catus
ENSCLAG00000006622	MTREX	100	90.115	ENSFALG00000010850	MTREX	100	90.115	Ficedula_albicollis
ENSCLAG00000006622	MTREX	100	97.793	ENSFDAG00000011199	MTREX	100	97.793	Fukomys_damarensis
ENSCLAG00000006622	MTREX	100	83.699	ENSFHEG00000023014	mtrex	100	82.224	Fundulus_heteroclitus
ENSCLAG00000006622	MTREX	100	79.866	ENSGMOG00000014702	mtrex	100	79.866	Gadus_morhua
ENSCLAG00000006622	MTREX	100	90.431	ENSGALG00000014709	MTREX	86	90.431	Gallus_gallus
ENSCLAG00000006622	MTREX	100	83.810	ENSGAFG00000012425	mtrex	100	83.810	Gambusia_affinis
ENSCLAG00000006622	MTREX	100	79.638	ENSGACG00000016260	mtrex	96	85.435	Gasterosteus_aculeatus
ENSCLAG00000006622	MTREX	100	91.946	ENSGAGG00000020036	MTREX	100	91.659	Gopherus_agassizii
ENSCLAG00000006622	MTREX	100	98.081	ENSGGOG00000001867	MTREX	100	98.081	Gorilla_gorilla
ENSCLAG00000006622	MTREX	100	82.667	ENSHBUG00000006229	mtrex	100	82.729	Haplochromis_burtoni
ENSCLAG00000006622	MTREX	100	98.177	ENSHGLG00000019445	SKIV2L2	100	98.177	Heterocephalus_glaber_female
ENSCLAG00000006622	MTREX	100	98.177	ENSHGLG00100011833	SKIV2L2	100	98.177	Heterocephalus_glaber_male
ENSCLAG00000006622	MTREX	91	84.725	ENSHCOG00000019995	mtrex	100	84.725	Hippocampus_comes
ENSCLAG00000006622	MTREX	100	85.100	ENSIPUG00000024348	skiv2l2	100	84.733	Ictalurus_punctatus
ENSCLAG00000006622	MTREX	100	97.985	ENSSTOG00000010802	MTREX	100	97.985	Ictidomys_tridecemlineatus
ENSCLAG00000006622	MTREX	100	90.403	ENSJJAG00000020975	Mtrex	100	90.403	Jaculus_jaculus
ENSCLAG00000006622	MTREX	100	83.031	ENSKMAG00000012642	mtrex	100	82.999	Kryptolebias_marmoratus
ENSCLAG00000006622	MTREX	100	83.333	ENSLBEG00000019367	mtrex	99	86.131	Labrus_bergylta
ENSCLAG00000006622	MTREX	100	88.506	ENSLACG00000009075	MTREX	100	88.061	Latimeria_chalumnae
ENSCLAG00000006622	MTREX	100	87.261	ENSLOCG00000010186	mtrex	100	86.973	Lepisosteus_oculatus
ENSCLAG00000006622	MTREX	99	95.393	ENSLAFG00000010497	MTREX	100	95.393	Loxodonta_africana
ENSCLAG00000006622	MTREX	100	97.985	ENSMFAG00000031610	MTREX	100	97.985	Macaca_fascicularis
ENSCLAG00000006622	MTREX	100	96.743	ENSMMUG00000010379	MTREX	100	96.743	Macaca_mulatta
ENSCLAG00000006622	MTREX	100	97.985	ENSMNEG00000032746	MTREX	100	97.985	Macaca_nemestrina
ENSCLAG00000006622	MTREX	100	97.985	ENSMLEG00000041051	MTREX	100	97.985	Mandrillus_leucophaeus
ENSCLAG00000006622	MTREX	100	82.713	ENSMAMG00000016753	mtrex	96	88.413	Mastacembelus_armatus
ENSCLAG00000006622	MTREX	100	82.667	ENSMZEG00005000414	mtrex	100	82.729	Maylandia_zebra
ENSCLAG00000006622	MTREX	94	67.409	ENSMGAG00000003980	MTREX	99	67.409	Meleagris_gallopavo
ENSCLAG00000006622	MTREX	100	96.929	ENSMAUG00000010727	Mtrex	100	96.929	Mesocricetus_auratus
ENSCLAG00000006622	MTREX	100	98.369	ENSMICG00000012779	MTREX	100	98.369	Microcebus_murinus
ENSCLAG00000006622	MTREX	100	96.737	ENSMOCG00000019886	Mtrex	100	96.737	Microtus_ochrogaster
ENSCLAG00000006622	MTREX	100	81.775	ENSMMOG00000002476	mtrex	100	81.870	Mola_mola
ENSCLAG00000006622	MTREX	100	92.994	ENSMODG00000019494	MTREX	100	93.090	Monodelphis_domestica
ENSCLAG00000006622	MTREX	92	82.497	ENSMALG00000002917	mtrex	99	82.497	Monopterus_albus
ENSCLAG00000006622	MTREX	100	96.449	MGP_CAROLIEiJ_G0018896	Mtrex	100	96.449	Mus_caroli
ENSCLAG00000006622	MTREX	100	96.545	ENSMUSG00000016018	Mtrex	100	96.545	Mus_musculus
ENSCLAG00000006622	MTREX	100	96.641	MGP_PahariEiJ_G0015967	Mtrex	100	96.641	Mus_pahari
ENSCLAG00000006622	MTREX	100	96.545	MGP_SPRETEiJ_G0019775	Mtrex	100	96.545	Mus_spretus
ENSCLAG00000006622	MTREX	100	98.177	ENSMPUG00000007619	MTREX	100	98.177	Mustela_putorius_furo
ENSCLAG00000006622	MTREX	100	95.981	ENSMLUG00000001152	MTREX	100	95.981	Myotis_lucifugus
ENSCLAG00000006622	MTREX	100	97.217	ENSNGAG00000011938	Mtrex	100	97.217	Nannospalax_galili
ENSCLAG00000006622	MTREX	100	82.762	ENSNBRG00000011293	mtrex	100	82.824	Neolamprologus_brichardi
ENSCLAG00000006622	MTREX	100	94.157	ENSNLEG00000001494	MTREX	100	94.157	Nomascus_leucogenys
ENSCLAG00000006622	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSCLAG00000006622	MTREX	100	82.342	ENSOPRG00000008009	MTREX	100	82.342	Ochotona_princeps
ENSCLAG00000006622	MTREX	100	97.889	ENSODEG00000017234	MTREX	100	97.889	Octodon_degus
ENSCLAG00000006622	MTREX	100	82.571	ENSONIG00000007587	mtrex	100	82.571	Oreochromis_niloticus
ENSCLAG00000006622	MTREX	100	97.889	ENSOCUG00000004463	MTREX	100	97.889	Oryctolagus_cuniculus
ENSCLAG00000006622	MTREX	100	82.650	ENSORLG00000005443	mtrex	100	82.555	Oryzias_latipes
ENSCLAG00000006622	MTREX	100	82.555	ENSORLG00020006329	mtrex	100	82.459	Oryzias_latipes_hni
ENSCLAG00000006622	MTREX	100	82.650	ENSORLG00015012924	mtrex	100	82.555	Oryzias_latipes_hsok
ENSCLAG00000006622	MTREX	100	82.034	ENSOMEG00000008825	mtrex	100	81.844	Oryzias_melastigma
ENSCLAG00000006622	MTREX	100	97.793	ENSOGAG00000002886	MTREX	100	97.793	Otolemur_garnettii
ENSCLAG00000006622	MTREX	100	97.512	ENSOARG00000007764	MTREX	100	97.512	Ovis_aries
ENSCLAG00000006622	MTREX	100	98.177	ENSPPAG00000039291	MTREX	100	98.177	Pan_paniscus
ENSCLAG00000006622	MTREX	100	97.793	ENSPPRG00000019701	MTREX	100	97.793	Panthera_pardus
ENSCLAG00000006622	MTREX	100	96.257	ENSPTIG00000009313	MTREX	100	96.257	Panthera_tigris_altaica
ENSCLAG00000006622	MTREX	100	98.177	ENSPTRG00000016878	MTREX	100	98.177	Pan_troglodytes
ENSCLAG00000006622	MTREX	100	97.889	ENSPANG00000009697	MTREX	100	97.889	Papio_anubis
ENSCLAG00000006622	MTREX	100	86.819	ENSPKIG00000020833	mtrex	100	86.724	Paramormyrops_kingsleyae
ENSCLAG00000006622	MTREX	100	91.755	ENSPSIG00000012150	MTREX	100	92.234	Pelodiscus_sinensis
ENSCLAG00000006622	MTREX	100	81.125	ENSPMGG00000002582	mtrex	100	81.125	Periophthalmus_magnuspinnatus
ENSCLAG00000006622	MTREX	95	65.863	ENSPMAG00000009668	mtrex	100	65.562	Petromyzon_marinus
ENSCLAG00000006622	MTREX	91	96.832	ENSPCIG00000024730	MTREX	100	96.832	Phascolarctos_cinereus
ENSCLAG00000006622	MTREX	75	87.452	ENSPFOG00000003141	mtrex	100	87.690	Poecilia_formosa
ENSCLAG00000006622	MTREX	100	83.954	ENSPLAG00000021311	mtrex	100	83.889	Poecilia_latipinna
ENSCLAG00000006622	MTREX	91	87.618	ENSPMEG00000010597	mtrex	99	87.933	Poecilia_mexicana
ENSCLAG00000006622	MTREX	100	83.699	ENSPREG00000003089	mtrex	100	83.699	Poecilia_reticulata
ENSCLAG00000006622	MTREX	98	98.049	ENSPPYG00000015469	MTREX	98	98.049	Pongo_abelii
ENSCLAG00000006622	MTREX	94	82.791	ENSPCAG00000013120	MTREX	94	82.791	Procavia_capensis
ENSCLAG00000006622	MTREX	99	92.324	ENSPCOG00000018092	MTREX	100	92.324	Propithecus_coquereli
ENSCLAG00000006622	MTREX	100	97.889	ENSPVAG00000002445	MTREX	100	97.889	Pteropus_vampyrus
ENSCLAG00000006622	MTREX	100	82.571	ENSPNYG00000006164	mtrex	100	82.634	Pundamilia_nyererei
ENSCLAG00000006622	MTREX	100	85.960	ENSPNAG00000008794	mtrex	100	85.960	Pygocentrus_nattereri
ENSCLAG00000006622	MTREX	99	96.501	ENSRNOG00000010125	Mtrex	97	96.501	Rattus_norvegicus
ENSCLAG00000006622	MTREX	100	96.257	ENSRBIG00000034930	MTREX	100	96.257	Rhinopithecus_bieti
ENSCLAG00000006622	MTREX	100	97.985	ENSRROG00000039895	MTREX	100	97.985	Rhinopithecus_roxellana
ENSCLAG00000006622	MTREX	89	55.451	YJL050W	MTR4	89	55.451	Saccharomyces_cerevisiae
ENSCLAG00000006622	MTREX	100	97.985	ENSSBOG00000026693	MTREX	100	97.985	Saimiri_boliviensis_boliviensis
ENSCLAG00000006622	MTREX	96	95.286	ENSSHAG00000004600	MTREX	100	95.286	Sarcophilus_harrisii
ENSCLAG00000006622	MTREX	100	87.572	ENSSFOG00015014355	skiv2l2	100	87.572	Scleropages_formosus
ENSCLAG00000006622	MTREX	100	83.143	ENSSMAG00000007572	mtrex	100	83.015	Scophthalmus_maximus
ENSCLAG00000006622	MTREX	100	83.683	ENSSDUG00000023789	mtrex	100	83.683	Seriola_dumerili
ENSCLAG00000006622	MTREX	100	83.492	ENSSLDG00000006301	mtrex	100	83.492	Seriola_lalandi_dorsalis
ENSCLAG00000006622	MTREX	100	94.050	ENSSARG00000008387	MTREX	100	94.050	Sorex_araneus
ENSCLAG00000006622	MTREX	100	79.578	ENSSPUG00000007071	MTREX	100	79.502	Sphenodon_punctatus
ENSCLAG00000006622	MTREX	91	87.303	ENSSPAG00000011319	mtrex	94	87.828	Stegastes_partitus
ENSCLAG00000006622	MTREX	100	97.985	ENSSSCG00000016911	MTREX	100	97.985	Sus_scrofa
ENSCLAG00000006622	MTREX	100	89.741	ENSTGUG00000002480	MTREX	100	89.741	Taeniopygia_guttata
ENSCLAG00000006622	MTREX	100	82.571	ENSTRUG00000014571	mtrex	100	82.555	Takifugu_rubripes
ENSCLAG00000006622	MTREX	100	81.958	ENSTBEG00000007769	MTREX	100	81.958	Tupaia_belangeri
ENSCLAG00000006622	MTREX	100	97.505	ENSTTRG00000008678	MTREX	100	97.505	Tursiops_truncatus
ENSCLAG00000006622	MTREX	100	97.889	ENSUAMG00000023061	MTREX	100	97.889	Ursus_americanus
ENSCLAG00000006622	MTREX	100	97.222	ENSUMAG00000009373	MTREX	99	99.655	Ursus_maritimus
ENSCLAG00000006622	MTREX	100	86.756	ENSVPAG00000011174	MTREX	100	86.756	Vicugna_pacos
ENSCLAG00000006622	MTREX	100	98.177	ENSVVUG00000021337	MTREX	100	98.177	Vulpes_vulpes
ENSCLAG00000006622	MTREX	100	88.686	ENSXETG00000032798	MTREX	100	88.399	Xenopus_tropicalis
ENSCLAG00000006622	MTREX	100	83.508	ENSXMAG00000004799	mtrex	100	83.413	Xiphophorus_maculatus