EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000006667 (Gene tree)
Gene ID: 102015175
Gene Symbol: PCBP3
Alias: FLJ44028|PCBP3-OT1|PCBP3OT
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 68751 bases
Position: chrJH721867.1:42377972-42446722
Accession: 102015175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000009613	KH_1	PF00013.29	1.5e-55	1	3
ENSCLAP00000009613	KH_1	PF00013.29	1.5e-55	2	3
ENSCLAP00000009613	KH_1	PF00013.29	1.5e-55	3	3
ENSCLAP00000009613	KH_2	PF07650.17	6.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000009742	PCBP3-201	1116	XM_013505654	ENSCLAP00000009613	371 (aa)	XP_013361108	-

Gene Model

Click here to download ENSCLAG00000006667's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000006667's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000006667	PCBP3	72	40.351	ENSCLAG00000008948	NOVA1	64	40.351
ENSCLAG00000006667	PCBP3	91	72.781	ENSCLAG00000012230	PCBP2	99	72.781
ENSCLAG00000006667	PCBP3	66	33.654	ENSCLAG00000005621	FUBP1	51	40.625
ENSCLAG00000006667	PCBP3	89	36.296	ENSCLAG00000014808	IGF2BP2	68	36.296
ENSCLAG00000006667	PCBP3	91	66.027	ENSCLAG00000017909	PCBP1	99	66.027
ENSCLAG00000006667	PCBP3	83	66.238	ENSCLAG00000006163	-	97	66.238
ENSCLAG00000006667	PCBP3	86	33.577	ENSCLAG00000009835	IGF2BP3	59	33.813
ENSCLAG00000006667	PCBP3	67	35.938	ENSCLAG00000007309	KHSRP	56	35.938
ENSCLAG00000006667	PCBP3	86	60.625	ENSCLAG00000008356	PCBP4	73	60.625
ENSCLAG00000006667	PCBP3	68	48.684	ENSCLAG00000005883	HNRNPK	59	48.684
ENSCLAG00000006667	PCBP3	87	30.159	ENSCLAG00000009005	FUBP3	72	30.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000006667	PCBP3	100	98.113	ENSG00000183570	PCBP3	100	98.113	Homo_sapiens
ENSCLAG00000006667	PCBP3	91	71.720	ENSAPOG00000023735	zgc:110045	99	71.720	Acanthochromis_polyacanthus
ENSCLAG00000006667	PCBP3	91	67.826	ENSACIG00000002577	zgc:110045	96	73.934	Amphilophus_citrinellus
ENSCLAG00000006667	PCBP3	73	71.845	ENSAOCG00000005266	zgc:110045	97	71.845	Amphiprion_ocellaris
ENSCLAG00000006667	PCBP3	88	72.072	ENSAPEG00000000729	zgc:110045	72	72.072	Amphiprion_percula
ENSCLAG00000006667	PCBP3	86	66.939	ENSATEG00000011191	zgc:110045	65	66.939	Anabas_testudineus
ENSCLAG00000006667	PCBP3	88	72.673	ENSACLG00000019285	zgc:110045	72	72.673	Astatotilapia_calliptera
ENSCLAG00000006667	PCBP3	100	92.722	ENSBTAG00000030775	PCBP3	100	93.370	Bos_taurus
ENSCLAG00000006667	PCBP3	100	97.844	ENSCAFG00000011907	PCBP3	100	97.844	Canis_familiaris
ENSCLAG00000006667	PCBP3	99	96.185	ENSCHIG00000015841	PCBP3	98	96.185	Capra_hircus
ENSCLAG00000006667	PCBP3	78	84.519	ENSTSYG00000005254	PCBP3	94	84.519	Carlito_syrichta
ENSCLAG00000006667	PCBP3	99	79.133	ENSCAPG00000006767	PCBP3	91	79.133	Cavia_aperea
ENSCLAG00000006667	PCBP3	100	98.922	ENSCPOG00000003648	PCBP3	100	98.922	Cavia_porcellus
ENSCLAG00000006667	PCBP3	100	98.113	ENSCCAG00000024561	PCBP3	100	98.113	Cebus_capucinus
ENSCLAG00000006667	PCBP3	100	97.844	ENSCATG00000038419	PCBP3	100	97.844	Cercocebus_atys
ENSCLAG00000006667	PCBP3	100	97.574	ENSCANG00000026757	PCBP3	100	97.574	Colobus_angolensis_palliatus
ENSCLAG00000006667	PCBP3	100	98.113	ENSCGRG00001006836	Pcbp3	100	98.113	Cricetulus_griseus_chok1gshd
ENSCLAG00000006667	PCBP3	100	98.113	ENSCGRG00000001837	Pcbp3	100	98.113	Cricetulus_griseus_crigri
ENSCLAG00000006667	PCBP3	90	71.893	ENSCSEG00000010020	zgc:110045	97	71.893	Cynoglossus_semilaevis
ENSCLAG00000006667	PCBP3	71	74.112	ENSCVAG00000004726	zgc:110045	89	74.112	Cyprinodon_variegatus
ENSCLAG00000006667	PCBP3	72	77.778	ENSDARG00000057141	zgc:110045	94	77.778	Danio_rerio
ENSCLAG00000006667	PCBP3	99	95.095	ENSDNOG00000049518	PCBP3	100	95.095	Dasypus_novemcinctus
ENSCLAG00000006667	PCBP3	81	82.927	ENSDORG00000003640	Pcbp3	99	82.927	Dipodomys_ordii
ENSCLAG00000006667	PCBP3	88	73.391	ENSEBUG00000009697	zgc:110045	99	76.382	Eptatretus_burgeri
ENSCLAG00000006667	PCBP3	100	93.261	ENSEASG00005007068	PCBP3	100	93.261	Equus_asinus_asinus
ENSCLAG00000006667	PCBP3	100	93.261	ENSECAG00000012413	PCBP3	100	93.261	Equus_caballus
ENSCLAG00000006667	PCBP3	88	71.045	ENSELUG00000019784	zgc:110045	72	71.045	Esox_lucius
ENSCLAG00000006667	PCBP3	100	98.113	ENSFCAG00000014812	PCBP3	100	98.113	Felis_catus
ENSCLAG00000006667	PCBP3	100	97.844	ENSFDAG00000009117	PCBP3	100	97.844	Fukomys_damarensis
ENSCLAG00000006667	PCBP3	88	66.082	ENSFHEG00000018838	-	92	73.632	Fundulus_heteroclitus
ENSCLAG00000006667	PCBP3	90	68.876	ENSGMOG00000005953	zgc:110045	98	68.876	Gadus_morhua
ENSCLAG00000006667	PCBP3	73	79.126	ENSGAFG00000017864	zgc:110045	91	79.126	Gambusia_affinis
ENSCLAG00000006667	PCBP3	91	71.512	ENSGACG00000003044	zgc:110045	99	71.512	Gasterosteus_aculeatus
ENSCLAG00000006667	PCBP3	100	97.844	ENSGGOG00000003683	PCBP3	100	97.844	Gorilla_gorilla
ENSCLAG00000006667	PCBP3	91	72.303	ENSHBUG00000012495	zgc:110045	99	72.303	Haplochromis_burtoni
ENSCLAG00000006667	PCBP3	99	98.098	ENSHGLG00000018620	PCBP3	99	98.098	Heterocephalus_glaber_female
ENSCLAG00000006667	PCBP3	99	98.098	ENSHGLG00100013590	PCBP3	99	98.098	Heterocephalus_glaber_male
ENSCLAG00000006667	PCBP3	81	73.684	ENSHCOG00000000818	zgc:110045	96	73.684	Hippocampus_comes
ENSCLAG00000006667	PCBP3	71	75.362	ENSIPUG00000003932	zgc:110045	77	75.362	Ictalurus_punctatus
ENSCLAG00000006667	PCBP3	100	98.383	ENSSTOG00000007178	PCBP3	100	98.383	Ictidomys_tridecemlineatus
ENSCLAG00000006667	PCBP3	100	97.844	ENSJJAG00000021192	Pcbp3	100	97.844	Jaculus_jaculus
ENSCLAG00000006667	PCBP3	76	80.952	ENSKMAG00000016179	-	90	80.952	Kryptolebias_marmoratus
ENSCLAG00000006667	PCBP3	91	70.262	ENSLBEG00000023074	zgc:110045	99	70.262	Labrus_bergylta
ENSCLAG00000006667	PCBP3	91	97.935	ENSLAFG00000020835	PCBP3	100	97.935	Loxodonta_africana
ENSCLAG00000006667	PCBP3	100	97.844	ENSMFAG00000034574	PCBP3	100	97.844	Macaca_fascicularis
ENSCLAG00000006667	PCBP3	100	97.844	ENSMMUG00000003825	PCBP3	100	97.844	Macaca_mulatta
ENSCLAG00000006667	PCBP3	100	97.844	ENSMNEG00000035551	PCBP3	100	97.844	Macaca_nemestrina
ENSCLAG00000006667	PCBP3	100	97.844	ENSMLEG00000038785	PCBP3	100	97.844	Mandrillus_leucophaeus
ENSCLAG00000006667	PCBP3	88	71.988	ENSMAMG00000014389	zgc:110045	99	71.988	Mastacembelus_armatus
ENSCLAG00000006667	PCBP3	88	72.673	ENSMZEG00005011785	zgc:110045	72	72.673	Maylandia_zebra
ENSCLAG00000006667	PCBP3	100	97.574	ENSMAUG00000007036	Pcbp3	100	97.574	Mesocricetus_auratus
ENSCLAG00000006667	PCBP3	100	97.574	ENSMICG00000012679	PCBP3	100	97.574	Microcebus_murinus
ENSCLAG00000006667	PCBP3	100	97.844	ENSMOCG00000016127	Pcbp3	100	97.844	Microtus_ochrogaster
ENSCLAG00000006667	PCBP3	74	80.556	ENSMMOG00000008399	zgc:110045	85	80.556	Mola_mola
ENSCLAG00000006667	PCBP3	77	76.166	ENSMALG00000008763	zgc:110045	90	76.166	Monopterus_albus
ENSCLAG00000006667	PCBP3	100	97.844	MGP_CAROLIEiJ_G0015475	Pcbp3	100	97.844	Mus_caroli
ENSCLAG00000006667	PCBP3	100	97.574	ENSMUSG00000001120	Pcbp3	100	97.574	Mus_musculus
ENSCLAG00000006667	PCBP3	100	97.844	MGP_PahariEiJ_G0030889	Pcbp3	100	97.844	Mus_pahari
ENSCLAG00000006667	PCBP3	100	97.844	MGP_SPRETEiJ_G0016288	Pcbp3	100	97.844	Mus_spretus
ENSCLAG00000006667	PCBP3	99	93.207	ENSMLUG00000003074	PCBP3	99	93.207	Myotis_lucifugus
ENSCLAG00000006667	PCBP3	100	98.383	ENSNGAG00000005416	Pcbp3	100	98.383	Nannospalax_galili
ENSCLAG00000006667	PCBP3	88	72.673	ENSNBRG00000017646	zgc:110045	72	72.673	Neolamprologus_brichardi
ENSCLAG00000006667	PCBP3	100	98.383	ENSNLEG00000002639	PCBP3	100	98.383	Nomascus_leucogenys
ENSCLAG00000006667	PCBP3	91	87.569	ENSMEUG00000012960	PCBP3	100	87.569	Notamacropus_eugenii
ENSCLAG00000006667	PCBP3	99	97.290	ENSODEG00000012873	PCBP3	100	97.290	Octodon_degus
ENSCLAG00000006667	PCBP3	88	72.673	ENSONIG00000010370	zgc:110045	76	72.673	Oreochromis_niloticus
ENSCLAG00000006667	PCBP3	86	90.288	ENSOANG00000006265	PCBP3	98	90.288	Ornithorhynchus_anatinus
ENSCLAG00000006667	PCBP3	88	72.072	ENSORLG00000014385	-	72	72.072	Oryzias_latipes
ENSCLAG00000006667	PCBP3	88	71.772	ENSORLG00020003139	zgc:110045	86	73.460	Oryzias_latipes_hni
ENSCLAG00000006667	PCBP3	88	71.772	ENSOMEG00000015459	-	72	71.772	Oryzias_melastigma
ENSCLAG00000006667	PCBP3	100	91.398	ENSOARG00000012704	PCBP3	100	91.398	Ovis_aries
ENSCLAG00000006667	PCBP3	100	97.844	ENSPPAG00000021940	PCBP3	100	97.844	Pan_paniscus
ENSCLAG00000006667	PCBP3	100	98.113	ENSPPRG00000003933	PCBP3	100	98.113	Panthera_pardus
ENSCLAG00000006667	PCBP3	100	83.422	ENSPTIG00000012038	PCBP3	100	84.367	Panthera_tigris_altaica
ENSCLAG00000006667	PCBP3	99	75.610	ENSPTRG00000014010	PCBP3	99	75.610	Pan_troglodytes
ENSCLAG00000006667	PCBP3	100	97.844	ENSPANG00000023631	PCBP3	100	97.844	Papio_anubis
ENSCLAG00000006667	PCBP3	73	74.627	ENSPMGG00000022531	-	92	74.627	Periophthalmus_magnuspinnatus
ENSCLAG00000006667	PCBP3	88	61.404	ENSPMGG00000021588	-	72	61.404	Periophthalmus_magnuspinnatus
ENSCLAG00000006667	PCBP3	100	98.113	ENSPEMG00000000587	Pcbp3	100	98.113	Peromyscus_maniculatus_bairdii
ENSCLAG00000006667	PCBP3	90	71.598	ENSPFOG00000002348	zgc:110045	98	71.598	Poecilia_formosa
ENSCLAG00000006667	PCBP3	71	75.243	ENSPLAG00000017488	zgc:110045	90	75.243	Poecilia_latipinna
ENSCLAG00000006667	PCBP3	88	70.948	ENSPMEG00000012762	zgc:110045	91	79.126	Poecilia_mexicana
ENSCLAG00000006667	PCBP3	87	72.866	ENSPREG00000001797	zgc:110045	94	77.358	Poecilia_reticulata
ENSCLAG00000006667	PCBP3	82	97.656	ENSPPYG00000011525	-	94	97.656	Pongo_abelii
ENSCLAG00000006667	PCBP3	88	76.000	ENSPCAG00000001454	PCBP3	100	76.000	Procavia_capensis
ENSCLAG00000006667	PCBP3	100	97.844	ENSPCOG00000013797	PCBP3	100	97.844	Propithecus_coquereli
ENSCLAG00000006667	PCBP3	78	89.565	ENSPVAG00000000832	PCBP3	83	89.565	Pteropus_vampyrus
ENSCLAG00000006667	PCBP3	81	74.408	ENSPNYG00000004637	zgc:110045	96	74.408	Pundamilia_nyererei
ENSCLAG00000006667	PCBP3	76	78.673	ENSPNAG00000004501	zgc:110045	94	78.673	Pygocentrus_nattereri
ENSCLAG00000006667	PCBP3	100	97.844	ENSRROG00000034567	PCBP3	100	97.844	Rhinopithecus_roxellana
ENSCLAG00000006667	PCBP3	100	97.844	ENSSBOG00000005789	PCBP3	100	97.844	Saimiri_boliviensis_boliviensis
ENSCLAG00000006667	PCBP3	88	72.072	ENSSMAG00000013541	zgc:110045	91	76.389	Scophthalmus_maximus
ENSCLAG00000006667	PCBP3	81	69.355	ENSSDUG00000019371	zgc:110045	66	69.355	Seriola_dumerili
ENSCLAG00000006667	PCBP3	88	72.372	ENSSLDG00000021064	zgc:110045	72	72.372	Seriola_lalandi_dorsalis
ENSCLAG00000006667	PCBP3	77	74.752	ENSSARG00000007629	-	100	74.752	Sorex_araneus
ENSCLAG00000006667	PCBP3	91	72.012	ENSSPAG00000000563	zgc:110045	99	72.012	Stegastes_partitus
ENSCLAG00000006667	PCBP3	100	92.722	ENSSSCG00000023041	PCBP3	100	92.722	Sus_scrofa
ENSCLAG00000006667	PCBP3	75	83.333	ENSTRUG00000017789	zgc:110045	92	83.333	Takifugu_rubripes
ENSCLAG00000006667	PCBP3	71	81.503	ENSTNIG00000003546	zgc:110045	85	81.503	Tetraodon_nigroviridis
ENSCLAG00000006667	PCBP3	63	77.253	ENSTBEG00000011882	-	73	77.253	Tupaia_belangeri
ENSCLAG00000006667	PCBP3	100	95.418	ENSUAMG00000006491	PCBP3	100	95.418	Ursus_americanus
ENSCLAG00000006667	PCBP3	100	86.133	ENSUMAG00000025403	PCBP3	100	86.133	Ursus_maritimus
ENSCLAG00000006667	PCBP3	99	91.033	ENSVVUG00000023862	PCBP3	100	86.286	Vulpes_vulpes
ENSCLAG00000006667	PCBP3	69	80.247	ENSXCOG00000005968	zgc:110045	82	80.247	Xiphophorus_couchianus
ENSCLAG00000006667	PCBP3	87	72.561	ENSXMAG00000008030	zgc:110045	71	72.561	Xiphophorus_maculatus