EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000007100 (Gene tree)
Gene ID: 102008494
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 21286 bases
Position: chrJH721866.1:8000269-8021554
Accession: 102008494
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000010267	SAP	PF02037.27	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000010397	HNRNPU-201	11744	XM_005374785	ENSCLAP00000010267	822 (aa)	XP_005374842	UPI00038EF64D

Gene Model

Click here to download ENSCLAG00000007100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000007100's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000007100	HNRNPU	63	59.318	ENSCLAG00000000985	HNRNPUL1	64	58.537

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000007100	HNRNPU	100	98.182	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSCLAG00000007100	HNRNPU	79	79.167	ENSAPOG00000017400	hnrnpub	87	79.167	Acanthochromis_polyacanthus
ENSCLAG00000007100	HNRNPU	100	94.310	ENSAMEG00000009145	HNRNPU	100	94.431	Ailuropoda_melanoleuca
ENSCLAG00000007100	HNRNPU	81	60.197	ENSACIG00000012138	hnrnpub	87	83.333	Amphilophus_citrinellus
ENSCLAG00000007100	HNRNPU	79	77.083	ENSAOCG00000015843	hnrnpub	89	63.077	Amphiprion_ocellaris
ENSCLAG00000007100	HNRNPU	79	77.083	ENSAPEG00000014679	hnrnpub	89	63.077	Amphiprion_percula
ENSCLAG00000007100	HNRNPU	87	61.863	ENSATEG00000016178	hnrnpub	81	59.736	Anabas_testudineus
ENSCLAG00000007100	HNRNPU	81	84.296	ENSACAG00000004511	HNRNPU	72	89.701	Anolis_carolinensis
ENSCLAG00000007100	HNRNPU	100	95.758	ENSANAG00000033895	-	100	95.758	Aotus_nancymaae
ENSCLAG00000007100	HNRNPU	78	85.714	ENSACLG00000008165	hnrnpub	85	85.714	Astatotilapia_calliptera
ENSCLAG00000007100	HNRNPU	100	98.424	ENSBTAG00000007606	HNRNPU	100	98.424	Bos_taurus
ENSCLAG00000007100	HNRNPU	100	98.061	ENSCJAG00000016914	HNRNPU	100	98.061	Callithrix_jacchus
ENSCLAG00000007100	HNRNPU	100	96.364	ENSCAFG00020000918	HNRNPU	100	96.364	Canis_lupus_dingo
ENSCLAG00000007100	HNRNPU	100	96.121	ENSCHIG00000004900	HNRNPU	100	96.121	Capra_hircus
ENSCLAG00000007100	HNRNPU	100	99.757	ENSCPOG00000011887	HNRNPU	100	99.757	Cavia_porcellus
ENSCLAG00000007100	HNRNPU	100	97.818	ENSCCAG00000037859	-	100	97.818	Cebus_capucinus
ENSCLAG00000007100	HNRNPU	100	97.818	ENSCATG00000035273	HNRNPU	100	97.818	Cercocebus_atys
ENSCLAG00000007100	HNRNPU	100	95.515	ENSCSAG00000009219	HNRNPU	100	95.515	Chlorocebus_sabaeus
ENSCLAG00000007100	HNRNPU	79	98.333	ENSCHOG00000001387	HNRNPU	79	98.333	Choloepus_hoffmanni
ENSCLAG00000007100	HNRNPU	100	79.786	ENSCPBG00000009415	HNRNPU	98	81.125	Chrysemys_picta_bellii
ENSCLAG00000007100	HNRNPU	100	93.697	ENSCANG00000022780	HNRNPU	100	93.212	Colobus_angolensis_palliatus
ENSCLAG00000007100	HNRNPU	100	95.742	ENSCGRG00001020525	Hnrnpu	100	94.769	Cricetulus_griseus_chok1gshd
ENSCLAG00000007100	HNRNPU	80	68.852	ENSCSEG00000010804	hnrnpub	89	65.625	Cynoglossus_semilaevis
ENSCLAG00000007100	HNRNPU	79	73.214	ENSCVAG00000004280	hnrnpub	85	73.214	Cyprinodon_variegatus
ENSCLAG00000007100	HNRNPU	79	62.319	ENSDARG00000015206	hnrnpua	89	62.319	Danio_rerio
ENSCLAG00000007100	HNRNPU	78	83.333	ENSDARG00000004735	hnrnpub	90	59.056	Danio_rerio
ENSCLAG00000007100	HNRNPU	79	99.832	ENSDNOG00000000215	HNRNPU	88	99.832	Dasypus_novemcinctus
ENSCLAG00000007100	HNRNPU	100	91.119	ENSDORG00000015491	Hnrnpu	100	91.119	Dipodomys_ordii
ENSCLAG00000007100	HNRNPU	100	91.394	ENSETEG00000014565	HNRNPU	100	90.545	Echinops_telfairi
ENSCLAG00000007100	HNRNPU	100	96.242	ENSEASG00005003017	HNRNPU	100	96.242	Equus_asinus_asinus
ENSCLAG00000007100	HNRNPU	100	96.121	ENSECAG00000007955	HNRNPU	100	96.121	Equus_caballus
ENSCLAG00000007100	HNRNPU	73	57.632	ENSELUG00000010733	hnrnpub	62	65.996	Esox_lucius
ENSCLAG00000007100	HNRNPU	89	56.169	ENSELUG00000011966	hnrnpua	67	72.973	Esox_lucius
ENSCLAG00000007100	HNRNPU	100	96.117	ENSFCAG00000002156	HNRNPU	99	96.117	Felis_catus
ENSCLAG00000007100	HNRNPU	91	96.764	ENSFDAG00000006026	HNRNPU	100	96.764	Fukomys_damarensis
ENSCLAG00000007100	HNRNPU	80	71.429	ENSFHEG00000022639	hnrnpub	70	68.333	Fundulus_heteroclitus
ENSCLAG00000007100	HNRNPU	73	58.665	ENSGMOG00000001755	hnrnpub	77	61.120	Gadus_morhua
ENSCLAG00000007100	HNRNPU	100	78.706	ENSGALG00000010671	HNRNPU	100	78.000	Gallus_gallus
ENSCLAG00000007100	HNRNPU	62	80.435	ENSGAFG00000009369	hnrnpub	84	80.435	Gambusia_affinis
ENSCLAG00000007100	HNRNPU	74	60.697	ENSGACG00000004679	hnrnpub	73	61.794	Gasterosteus_aculeatus
ENSCLAG00000007100	HNRNPU	100	97.697	ENSGGOG00000004061	HNRNPU	100	97.697	Gorilla_gorilla
ENSCLAG00000007100	HNRNPU	78	85.714	ENSHBUG00000012290	hnrnpub	85	85.714	Haplochromis_burtoni
ENSCLAG00000007100	HNRNPU	100	98.063	ENSHGLG00000010594	-	100	98.063	Heterocephalus_glaber_female
ENSCLAG00000007100	HNRNPU	81	99.172	ENSHGLG00100015093	HNRNPU	100	99.172	Heterocephalus_glaber_male
ENSCLAG00000007100	HNRNPU	73	52.263	ENSHCOG00000020091	hnrnpub	78	54.211	Hippocampus_comes
ENSCLAG00000007100	HNRNPU	78	80.435	ENSIPUG00000007749	hnrnpu	92	74.510	Ictalurus_punctatus
ENSCLAG00000007100	HNRNPU	100	96.845	ENSJJAG00000011371	Hnrnpu	100	96.845	Jaculus_jaculus
ENSCLAG00000007100	HNRNPU	81	64.615	ENSKMAG00000004532	hnrnpub	88	60.563	Kryptolebias_marmoratus
ENSCLAG00000007100	HNRNPU	82	60.000	ENSLBEG00000022520	hnrnpub	87	62.687	Labrus_bergylta
ENSCLAG00000007100	HNRNPU	99	61.566	ENSLACG00000017463	HNRNPU	74	70.569	Latimeria_chalumnae
ENSCLAG00000007100	HNRNPU	73	69.677	ENSLOCG00000016652	hnrnpua	76	66.511	Lepisosteus_oculatus
ENSCLAG00000007100	HNRNPU	100	97.455	ENSLAFG00000021377	HNRNPU	100	97.455	Loxodonta_africana
ENSCLAG00000007100	HNRNPU	100	97.818	ENSMFAG00000037308	HNRNPU	100	97.818	Macaca_fascicularis
ENSCLAG00000007100	HNRNPU	100	95.515	ENSMMUG00000021098	HNRNPU	100	95.515	Macaca_mulatta
ENSCLAG00000007100	HNRNPU	100	97.818	ENSMNEG00000043645	HNRNPU	100	97.818	Macaca_nemestrina
ENSCLAG00000007100	HNRNPU	80	75.000	ENSMAMG00000007196	hnrnpub	86	75.000	Mastacembelus_armatus
ENSCLAG00000007100	HNRNPU	78	85.714	ENSMZEG00005003185	hnrnpub	85	85.714	Maylandia_zebra
ENSCLAG00000007100	HNRNPU	100	94.660	ENSMAUG00000008842	Hnrnpu	100	94.526	Mesocricetus_auratus
ENSCLAG00000007100	HNRNPU	100	97.939	ENSMICG00000004616	HNRNPU	100	97.939	Microcebus_murinus
ENSCLAG00000007100	HNRNPU	100	94.660	ENSMOCG00000015623	Hnrnpu	100	94.526	Microtus_ochrogaster
ENSCLAG00000007100	HNRNPU	100	93.067	ENSMODG00000006515	HNRNPU	100	93.067	Monodelphis_domestica
ENSCLAG00000007100	HNRNPU	77	72.549	ENSMALG00000018243	hnrnpub	79	63.316	Monopterus_albus
ENSCLAG00000007100	HNRNPU	100	94.775	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	94.775	Mus_caroli
ENSCLAG00000007100	HNRNPU	100	94.897	ENSMUSG00000039630	Hnrnpu	100	94.897	Mus_musculus
ENSCLAG00000007100	HNRNPU	100	94.053	MGP_PahariEiJ_G0028193	Hnrnpu	100	94.053	Mus_pahari
ENSCLAG00000007100	HNRNPU	100	94.897	MGP_SPRETEiJ_G0015761	Hnrnpu	100	94.897	Mus_spretus
ENSCLAG00000007100	HNRNPU	73	96.990	ENSMLUG00000000475	HNRNPU	74	97.311	Myotis_lucifugus
ENSCLAG00000007100	HNRNPU	100	95.255	ENSNGAG00000019075	Hnrnpu	100	95.255	Nannospalax_galili
ENSCLAG00000007100	HNRNPU	78	85.714	ENSNBRG00000017855	hnrnpub	85	85.714	Neolamprologus_brichardi
ENSCLAG00000007100	HNRNPU	99	88.043	ENSMEUG00000000541	HNRNPU	100	90.217	Notamacropus_eugenii
ENSCLAG00000007100	HNRNPU	70	99.029	ENSODEG00000014458	-	100	99.029	Octodon_degus
ENSCLAG00000007100	HNRNPU	78	85.714	ENSONIG00000001260	hnrnpub	88	85.714	Oreochromis_niloticus
ENSCLAG00000007100	HNRNPU	98	98.267	ENSOCUG00000014469	HNRNPU	93	98.267	Oryctolagus_cuniculus
ENSCLAG00000007100	HNRNPU	79	80.435	ENSORLG00020005363	hnrnpub	86	85.714	Oryzias_latipes_hni
ENSCLAG00000007100	HNRNPU	79	80.435	ENSORLG00015001190	hnrnpub	86	85.714	Oryzias_latipes_hsok
ENSCLAG00000007100	HNRNPU	79	80.435	ENSOMEG00000014951	hnrnpub	86	85.714	Oryzias_melastigma
ENSCLAG00000007100	HNRNPU	100	95.636	ENSOGAG00000014024	HNRNPU	100	95.636	Otolemur_garnettii
ENSCLAG00000007100	HNRNPU	81	98.831	ENSOARG00000004985	HNRNPU	91	99.161	Ovis_aries
ENSCLAG00000007100	HNRNPU	100	98.182	ENSPPAG00000038652	HNRNPU	100	98.182	Pan_paniscus
ENSCLAG00000007100	HNRNPU	100	98.182	ENSPPRG00000002662	HNRNPU	100	98.182	Panthera_pardus
ENSCLAG00000007100	HNRNPU	100	98.182	ENSPTRG00000002182	HNRNPU	100	98.182	Pan_troglodytes
ENSCLAG00000007100	HNRNPU	100	95.515	ENSPANG00000011643	HNRNPU	100	95.515	Papio_anubis
ENSCLAG00000007100	HNRNPU	85	66.614	ENSPKIG00000022332	hnrnpub	85	73.585	Paramormyrops_kingsleyae
ENSCLAG00000007100	HNRNPU	99	54.429	ENSPKIG00000006885	hnrnpua	78	66.826	Paramormyrops_kingsleyae
ENSCLAG00000007100	HNRNPU	100	94.630	ENSPCIG00000008657	HNRNPU	100	94.630	Phascolarctos_cinereus
ENSCLAG00000007100	HNRNPU	64	65.625	ENSPFOG00000002908	hnrnpub	89	62.162	Poecilia_formosa
ENSCLAG00000007100	HNRNPU	81	65.625	ENSPLAG00000004160	hnrnpub	89	62.162	Poecilia_latipinna
ENSCLAG00000007100	HNRNPU	100	90.788	ENSPCOG00000003883	-	100	90.667	Propithecus_coquereli
ENSCLAG00000007100	HNRNPU	100	97.818	ENSPCOG00000018655	-	100	97.818	Propithecus_coquereli
ENSCLAG00000007100	HNRNPU	100	98.303	ENSPVAG00000002581	HNRNPU	100	98.303	Pteropus_vampyrus
ENSCLAG00000007100	HNRNPU	78	85.714	ENSPNYG00000021642	hnrnpub	85	85.714	Pundamilia_nyererei
ENSCLAG00000007100	HNRNPU	73	65.231	ENSPNAG00000001055	hnrnpub	79	64.241	Pygocentrus_nattereri
ENSCLAG00000007100	HNRNPU	100	94.647	ENSRNOG00000033790	Hnrnpu	100	94.647	Rattus_norvegicus
ENSCLAG00000007100	HNRNPU	100	94.647	ENSRBIG00000031519	HNRNPU	100	94.647	Rhinopithecus_bieti
ENSCLAG00000007100	HNRNPU	100	95.636	ENSRROG00000041642	HNRNPU	100	95.636	Rhinopithecus_roxellana
ENSCLAG00000007100	HNRNPU	85	66.924	ENSSFOG00015001124	hnrnpub	86	65.278	Scleropages_formosus
ENSCLAG00000007100	HNRNPU	73	65.091	ENSSFOG00015019004	hnrnpu	77	67.572	Scleropages_formosus
ENSCLAG00000007100	HNRNPU	80	72.549	ENSSDUG00000005912	hnrnpub	85	72.549	Seriola_dumerili
ENSCLAG00000007100	HNRNPU	80	72.549	ENSSLDG00000004899	hnrnpub	79	56.437	Seriola_lalandi_dorsalis
ENSCLAG00000007100	HNRNPU	100	79.643	ENSSPUG00000011393	HNRNPU	100	79.327	Sphenodon_punctatus
ENSCLAG00000007100	HNRNPU	73	80.435	ENSSPAG00000011853	hnrnpub	86	80.435	Stegastes_partitus
ENSCLAG00000007100	HNRNPU	100	98.182	ENSSSCG00000010877	HNRNPU	100	98.182	Sus_scrofa
ENSCLAG00000007100	HNRNPU	85	57.504	ENSTRUG00000007759	hnrnpub	85	66.667	Takifugu_rubripes
ENSCLAG00000007100	HNRNPU	87	56.109	ENSTNIG00000009725	hnrnpub	90	70.213	Tetraodon_nigroviridis
ENSCLAG00000007100	HNRNPU	71	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSCLAG00000007100	HNRNPU	100	98.667	ENSUAMG00000021120	HNRNPU	100	98.667	Ursus_americanus
ENSCLAG00000007100	HNRNPU	99	83.883	ENSUMAG00000012322	HNRNPU	97	94.671	Ursus_maritimus
ENSCLAG00000007100	HNRNPU	78	93.233	ENSVPAG00000010520	HNRNPU	91	93.636	Vicugna_pacos
ENSCLAG00000007100	HNRNPU	100	96.364	ENSVVUG00000026524	HNRNPU	100	96.364	Vulpes_vulpes
ENSCLAG00000007100	HNRNPU	99	65.808	ENSXETG00000011386	hnrnpu	99	68.220	Xenopus_tropicalis
ENSCLAG00000007100	HNRNPU	62	80.435	ENSXMAG00000010356	hnrnpub	86	80.435	Xiphophorus_maculatus