EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000007137 (Gene tree)
Gene ID: 102024041
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 257878 bases
Position: chrJH721893.1:10900721-11158598
Accession: 102024041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000010326	ResIII	PF04851.15	1.1e-06	1	1
ENSCLAP00000010325	ResIII	PF04851.15	1.6e-06	1	1
ENSCLAP00000010325	BRK	PF07533.16	1e-30	1	2
ENSCLAP00000010325	BRK	PF07533.16	1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000010456	CHD9-202	4102	-	ENSCLAP00000010326	874 (aa)	-	-
ENSCLAT00000010455	CHD9-201	8980	XM_005388286	ENSCLAP00000010325	2899 (aa)	XP_005388343	UPI00038EDB54

Gene Model

Click here to download ENSCLAG00000007137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000007137's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000007137	CHD9	54	31.610	ENSCLAG00000004645	RAD54L	66	31.809
ENSCLAG00000007137	CHD9	57	43.426	ENSCLAG00000002171	SMARCA1	59	38.872
ENSCLAG00000007137	CHD9	54	38.087	ENSCLAG00000003938	HELLS	72	36.538
ENSCLAG00000007137	CHD9	56	42.799	ENSCLAG00000000880	CHD1L	52	42.799
ENSCLAG00000007137	CHD9	75	39.888	ENSCLAG00000016269	-	52	34.874
ENSCLAG00000007137	CHD9	82	76.011	ENSCLAG00000004679	CHD7	87	66.560
ENSCLAG00000007137	CHD9	56	44.040	ENSCLAG00000006153	SMARCA5	61	39.748
ENSCLAG00000007137	CHD9	90	68.750	ENSCLAG00000013743	CHD6	75	65.472

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000007137	CHD9	100	97.597	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSCLAG00000007137	CHD9	99	78.073	ENSAPOG00000023034	chd9	98	69.070	Acanthochromis_polyacanthus
ENSCLAG00000007137	CHD9	99	96.879	ENSAMEG00000016232	CHD9	99	95.284	Ailuropoda_melanoleuca
ENSCLAG00000007137	CHD9	99	78.073	ENSAOCG00000005487	chd9	67	75.298	Amphiprion_ocellaris
ENSCLAG00000007137	CHD9	99	78.073	ENSAPEG00000009859	chd9	99	61.546	Amphiprion_percula
ENSCLAG00000007137	CHD9	95	82.353	ENSATEG00000002748	chd9	99	61.860	Anabas_testudineus
ENSCLAG00000007137	CHD9	99	91.945	ENSAPLG00000002826	CHD9	74	86.016	Anas_platyrhynchos
ENSCLAG00000007137	CHD9	99	90.219	ENSACAG00000016150	CHD9	98	80.865	Anolis_carolinensis
ENSCLAG00000007137	CHD9	99	97.803	ENSANAG00000015630	CHD9	98	98.168	Aotus_nancymaae
ENSCLAG00000007137	CHD9	94	80.072	ENSACLG00000016899	chd9	73	63.064	Astatotilapia_calliptera
ENSCLAG00000007137	CHD9	99	76.802	ENSAMXG00000005652	chd9	68	74.970	Astyanax_mexicanus
ENSCLAG00000007137	CHD9	99	97.110	ENSBTAG00000002287	CHD9	99	94.624	Bos_taurus
ENSCLAG00000007137	CHD9	99	97.572	ENSCJAG00000001573	CHD9	98	98.535	Callithrix_jacchus
ENSCLAG00000007137	CHD9	99	96.532	ENSCAFG00000009699	CHD9	99	95.213	Canis_familiaris
ENSCLAG00000007137	CHD9	99	96.532	ENSCAFG00020002879	CHD9	98	99.634	Canis_lupus_dingo
ENSCLAG00000007137	CHD9	99	97.110	ENSTSYG00000007693	CHD9	98	99.267	Carlito_syrichta
ENSCLAG00000007137	CHD9	91	100.000	ENSCAPG00000011604	CHD9	81	81.749	Cavia_aperea
ENSCLAG00000007137	CHD9	100	94.136	ENSCPOG00000036544	CHD9	100	94.136	Cavia_porcellus
ENSCLAG00000007137	CHD9	99	97.572	ENSCCAG00000036178	CHD9	98	97.802	Cebus_capucinus
ENSCLAG00000007137	CHD9	99	97.572	ENSCATG00000036753	CHD9	98	98.535	Cercocebus_atys
ENSCLAG00000007137	CHD9	99	97.572	ENSCSAG00000005311	CHD9	99	95.286	Chlorocebus_sabaeus
ENSCLAG00000007137	CHD9	76	96.615	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSCLAG00000007137	CHD9	99	92.405	ENSCPBG00000012459	CHD9	99	91.908	Chrysemys_picta_bellii
ENSCLAG00000007137	CHD9	99	97.572	ENSCANG00000030349	CHD9	98	98.535	Colobus_angolensis_palliatus
ENSCLAG00000007137	CHD9	99	95.954	ENSCGRG00001016150	Chd9	99	91.701	Cricetulus_griseus_chok1gshd
ENSCLAG00000007137	CHD9	100	96.110	ENSCGRG00000012850	Chd9	100	96.110	Cricetulus_griseus_crigri
ENSCLAG00000007137	CHD9	95	78.318	ENSCSEG00000009209	chd9	67	72.143	Cynoglossus_semilaevis
ENSCLAG00000007137	CHD9	96	80.760	ENSCVAG00000016195	chd9	99	60.576	Cyprinodon_variegatus
ENSCLAG00000007137	CHD9	99	75.000	ENSDARG00000074498	chd9	68	73.890	Danio_rerio
ENSCLAG00000007137	CHD9	92	96.500	ENSDNOG00000006045	CHD9	99	94.811	Dasypus_novemcinctus
ENSCLAG00000007137	CHD9	69	93.700	ENSDORG00000008523	-	99	93.788	Dipodomys_ordii
ENSCLAG00000007137	CHD9	94	97.368	ENSETEG00000009565	CHD9	93	97.368	Echinops_telfairi
ENSCLAG00000007137	CHD9	99	97.225	ENSEASG00005014832	CHD9	99	95.248	Equus_asinus_asinus
ENSCLAG00000007137	CHD9	99	97.110	ENSECAG00000011505	CHD9	99	95.146	Equus_caballus
ENSCLAG00000007137	CHD9	83	96.685	ENSEEUG00000014515	CHD9	86	96.685	Erinaceus_europaeus
ENSCLAG00000007137	CHD9	97	80.093	ENSELUG00000006031	chd9	92	74.486	Esox_lucius
ENSCLAG00000007137	CHD9	99	96.763	ENSFCAG00000022534	CHD9	98	99.267	Felis_catus
ENSCLAG00000007137	CHD9	100	91.790	ENSFALG00000013276	CHD9	99	86.969	Ficedula_albicollis
ENSCLAG00000007137	CHD9	100	97.275	ENSFDAG00000021037	CHD9	100	97.275	Fukomys_damarensis
ENSCLAG00000007137	CHD9	99	76.897	ENSFHEG00000006068	chd9	96	60.874	Fundulus_heteroclitus
ENSCLAG00000007137	CHD9	94	76.923	ENSGMOG00000006040	chd9	83	76.866	Gadus_morhua
ENSCLAG00000007137	CHD9	99	91.715	ENSGALG00000039178	CHD9	98	85.009	Gallus_gallus
ENSCLAG00000007137	CHD9	99	77.258	ENSGAFG00000010014	chd9	98	67.788	Gambusia_affinis
ENSCLAG00000007137	CHD9	94	80.843	ENSGACG00000016694	chd9	96	74.574	Gasterosteus_aculeatus
ENSCLAG00000007137	CHD9	99	97.572	ENSGGOG00000014816	CHD9	98	98.901	Gorilla_gorilla
ENSCLAG00000007137	CHD9	99	75.862	ENSHBUG00000023322	chd9	96	69.930	Haplochromis_burtoni
ENSCLAG00000007137	CHD9	100	98.169	ENSHGLG00000014938	CHD9	100	98.169	Heterocephalus_glaber_female
ENSCLAG00000007137	CHD9	100	98.169	ENSHGLG00100001011	-	100	98.169	Heterocephalus_glaber_male
ENSCLAG00000007137	CHD9	94	81.189	ENSHCOG00000000937	chd9	69	73.491	Hippocampus_comes
ENSCLAG00000007137	CHD9	96	80.401	ENSIPUG00000016448	chd9	98	73.723	Ictalurus_punctatus
ENSCLAG00000007137	CHD9	100	97.140	ENSSTOG00000022273	CHD9	100	97.140	Ictidomys_tridecemlineatus
ENSCLAG00000007137	CHD9	69	92.250	ENSJJAG00000015741	-	99	92.775	Jaculus_jaculus
ENSCLAG00000007137	CHD9	96	81.043	ENSKMAG00000016784	chd9	96	61.581	Kryptolebias_marmoratus
ENSCLAG00000007137	CHD9	99	76.406	ENSLBEG00000012077	chd9	93	64.546	Labrus_bergylta
ENSCLAG00000007137	CHD9	99	77.675	ENSLACG00000005557	CHD9	73	72.127	Latimeria_chalumnae
ENSCLAG00000007137	CHD9	100	81.594	ENSLOCG00000007225	chd9	99	73.227	Lepisosteus_oculatus
ENSCLAG00000007137	CHD9	99	95.607	ENSLAFG00000015374	CHD9	99	94.279	Loxodonta_africana
ENSCLAG00000007137	CHD9	99	97.572	ENSMFAG00000041354	CHD9	98	98.535	Macaca_fascicularis
ENSCLAG00000007137	CHD9	99	97.572	ENSMMUG00000016310	CHD9	98	98.535	Macaca_mulatta
ENSCLAG00000007137	CHD9	99	97.572	ENSMNEG00000031494	CHD9	100	95.451	Macaca_nemestrina
ENSCLAG00000007137	CHD9	99	97.572	ENSMLEG00000043219	CHD9	98	98.535	Mandrillus_leucophaeus
ENSCLAG00000007137	CHD9	94	82.005	ENSMAMG00000003909	chd9	99	60.525	Mastacembelus_armatus
ENSCLAG00000007137	CHD9	99	77.373	ENSMZEG00005006581	chd9	67	75.553	Maylandia_zebra
ENSCLAG00000007137	CHD9	99	80.958	ENSMGAG00000004642	CHD9	72	80.893	Meleagris_gallopavo
ENSCLAG00000007137	CHD9	100	95.538	ENSMAUG00000011087	-	100	95.538	Mesocricetus_auratus
ENSCLAG00000007137	CHD9	99	97.688	ENSMICG00000016679	CHD9	98	98.535	Microcebus_murinus
ENSCLAG00000007137	CHD9	100	95.538	ENSMOCG00000018583	-	100	95.538	Microtus_ochrogaster
ENSCLAG00000007137	CHD9	94	81.159	ENSMMOG00000016406	chd9	74	63.034	Mola_mola
ENSCLAG00000007137	CHD9	67	96.246	ENSMODG00000013142	-	99	92.235	Monodelphis_domestica
ENSCLAG00000007137	CHD9	95	82.190	ENSMALG00000013306	chd9	73	62.546	Monopterus_albus
ENSCLAG00000007137	CHD9	99	94.913	MGP_CAROLIEiJ_G0031364	Chd9	99	90.427	Mus_caroli
ENSCLAG00000007137	CHD9	100	94.966	ENSMUSG00000056608	Chd9	100	94.966	Mus_musculus
ENSCLAG00000007137	CHD9	99	94.451	MGP_PahariEiJ_G0022964	Chd9	99	88.531	Mus_pahari
ENSCLAG00000007137	CHD9	99	94.798	MGP_SPRETEiJ_G0032483	Chd9	99	90.038	Mus_spretus
ENSCLAG00000007137	CHD9	99	96.994	ENSMPUG00000003285	CHD9	99	94.830	Mustela_putorius_furo
ENSCLAG00000007137	CHD9	99	95.723	ENSMLUG00000004456	CHD9	99	94.203	Myotis_lucifugus
ENSCLAG00000007137	CHD9	100	95.767	ENSNGAG00000019957	-	100	95.767	Nannospalax_galili
ENSCLAG00000007137	CHD9	99	77.373	ENSNBRG00000009423	chd9	67	75.418	Neolamprologus_brichardi
ENSCLAG00000007137	CHD9	99	97.457	ENSNLEG00000001026	CHD9	100	95.479	Nomascus_leucogenys
ENSCLAG00000007137	CHD9	83	95.082	ENSMEUG00000008222	-	84	96.732	Notamacropus_eugenii
ENSCLAG00000007137	CHD9	83	100.000	ENSOPRG00000011168	CHD9	85	96.857	Ochotona_princeps
ENSCLAG00000007137	CHD9	100	97.690	ENSODEG00000004466	CHD9	100	97.690	Octodon_degus
ENSCLAG00000007137	CHD9	96	81.043	ENSONIG00000002816	chd9	87	62.918	Oreochromis_niloticus
ENSCLAG00000007137	CHD9	99	92.964	ENSOANG00000013401	CHD9	99	86.699	Ornithorhynchus_anatinus
ENSCLAG00000007137	CHD9	100	97.368	ENSOCUG00000001016	CHD9	99	96.399	Oryctolagus_cuniculus
ENSCLAG00000007137	CHD9	96	80.476	ENSORLG00000013810	chd9	99	60.084	Oryzias_latipes
ENSCLAG00000007137	CHD9	95	78.998	ENSORLG00020020665	chd9	75	63.108	Oryzias_latipes_hni
ENSCLAG00000007137	CHD9	96	80.476	ENSORLG00015019126	chd9	94	69.431	Oryzias_latipes_hsok
ENSCLAG00000007137	CHD9	95	79.117	ENSOMEG00000015978	chd9	99	62.370	Oryzias_melastigma
ENSCLAG00000007137	CHD9	99	97.457	ENSOGAG00000002110	CHD9	99	95.146	Otolemur_garnettii
ENSCLAG00000007137	CHD9	99	97.110	ENSOARG00000017664	CHD9	99	94.456	Ovis_aries
ENSCLAG00000007137	CHD9	98	95.111	ENSPPAG00000039388	-	99	94.226	Pan_paniscus
ENSCLAG00000007137	CHD9	99	96.763	ENSPPRG00000004801	CHD9	98	98.901	Panthera_pardus
ENSCLAG00000007137	CHD9	99	96.647	ENSPTIG00000021854	CHD9	99	93.963	Panthera_tigris_altaica
ENSCLAG00000007137	CHD9	99	97.457	ENSPTRG00000008113	CHD9	98	98.901	Pan_troglodytes
ENSCLAG00000007137	CHD9	100	97.712	ENSPANG00000019307	CHD9	98	98.535	Papio_anubis
ENSCLAG00000007137	CHD9	99	81.272	ENSPKIG00000021876	chd9	68	76.369	Paramormyrops_kingsleyae
ENSCLAG00000007137	CHD9	96	77.791	ENSPKIG00000025401	-	71	63.066	Paramormyrops_kingsleyae
ENSCLAG00000007137	CHD9	99	88.940	ENSPSIG00000008099	CHD9	99	85.027	Pelodiscus_sinensis
ENSCLAG00000007137	CHD9	53	77.039	ENSPMAG00000006035	-	72	67.498	Petromyzon_marinus
ENSCLAG00000007137	CHD9	100	93.379	ENSPCIG00000017215	CHD9	97	89.477	Phascolarctos_cinereus
ENSCLAG00000007137	CHD9	94	81.961	ENSPFOG00000015839	chd9	99	59.720	Poecilia_formosa
ENSCLAG00000007137	CHD9	99	77.146	ENSPLAG00000011118	chd9	98	68.427	Poecilia_latipinna
ENSCLAG00000007137	CHD9	94	80.266	ENSPMEG00000015106	chd9	99	59.973	Poecilia_mexicana
ENSCLAG00000007137	CHD9	99	77.146	ENSPREG00000006473	chd9	98	67.939	Poecilia_reticulata
ENSCLAG00000007137	CHD9	99	97.572	ENSPPYG00000007348	CHD9	99	95.316	Pongo_abelii
ENSCLAG00000007137	CHD9	99	94.329	ENSPCAG00000007564	CHD9	86	95.221	Procavia_capensis
ENSCLAG00000007137	CHD9	99	97.572	ENSPCOG00000028433	CHD9	98	99.634	Propithecus_coquereli
ENSCLAG00000007137	CHD9	97	92.404	ENSPVAG00000015617	CHD9	97	92.610	Pteropus_vampyrus
ENSCLAG00000007137	CHD9	99	77.373	ENSPNYG00000010947	chd9	66	75.418	Pundamilia_nyererei
ENSCLAG00000007137	CHD9	99	77.865	ENSPNAG00000024141	chd9	68	74.689	Pygocentrus_nattereri
ENSCLAG00000007137	CHD9	99	92.832	ENSRNOG00000049302	Chd9	100	90.095	Rattus_norvegicus
ENSCLAG00000007137	CHD9	99	97.569	ENSRBIG00000035553	CHD9	98	98.535	Rhinopithecus_bieti
ENSCLAG00000007137	CHD9	96	97.503	ENSRROG00000033278	CHD9	98	98.535	Rhinopithecus_roxellana
ENSCLAG00000007137	CHD9	99	97.572	ENSSBOG00000030240	CHD9	98	97.802	Saimiri_boliviensis_boliviensis
ENSCLAG00000007137	CHD9	99	92.964	ENSSHAG00000002719	CHD9	99	87.777	Sarcophilus_harrisii
ENSCLAG00000007137	CHD9	99	77.640	ENSSFOG00015001327	chd9	67	76.039	Scleropages_formosus
ENSCLAG00000007137	CHD9	99	80.578	ENSSFOG00015020209	chd9	99	62.720	Scleropages_formosus
ENSCLAG00000007137	CHD9	99	76.983	ENSSMAG00000008953	chd9	99	62.467	Scophthalmus_maximus
ENSCLAG00000007137	CHD9	99	78.135	ENSSDUG00000006139	chd9	98	68.262	Seriola_dumerili
ENSCLAG00000007137	CHD9	99	78.125	ENSSLDG00000017818	chd9	98	68.730	Seriola_lalandi_dorsalis
ENSCLAG00000007137	CHD9	90	98.972	ENSSARG00000010632	CHD9	71	97.346	Sorex_araneus
ENSCLAG00000007137	CHD9	99	77.852	ENSSPAG00000021649	chd9	67	74.866	Stegastes_partitus
ENSCLAG00000007137	CHD9	99	97.110	ENSSSCG00000033591	CHD9	75	95.740	Sus_scrofa
ENSCLAG00000007137	CHD9	99	91.389	ENSTGUG00000007476	CHD9	100	84.971	Taeniopygia_guttata
ENSCLAG00000007137	CHD9	95	80.336	ENSTRUG00000009125	chd9	73	62.580	Takifugu_rubripes
ENSCLAG00000007137	CHD9	68	94.737	ENSTNIG00000003825	chd9	85	81.951	Tetraodon_nigroviridis
ENSCLAG00000007137	CHD9	92	83.935	ENSTBEG00000016052	-	81	94.144	Tupaia_belangeri
ENSCLAG00000007137	CHD9	99	97.225	ENSTTRG00000012674	CHD9	90	94.521	Tursiops_truncatus
ENSCLAG00000007137	CHD9	64	94.430	ENSUAMG00000022706	CHD9	98	99.634	Ursus_americanus
ENSCLAG00000007137	CHD9	99	96.879	ENSUMAG00000004043	CHD9	99	97.868	Ursus_maritimus
ENSCLAG00000007137	CHD9	97	94.368	ENSVPAG00000001374	CHD9	97	94.466	Vicugna_pacos
ENSCLAG00000007137	CHD9	99	96.647	ENSVVUG00000019435	CHD9	99	95.283	Vulpes_vulpes
ENSCLAG00000007137	CHD9	99	86.076	ENSXETG00000000349	chd9	96	76.648	Xenopus_tropicalis
ENSCLAG00000007137	CHD9	94	81.840	ENSXCOG00000012997	chd9	98	68.745	Xiphophorus_couchianus
ENSCLAG00000007137	CHD9	99	77.035	ENSXMAG00000016192	chd9	98	68.391	Xiphophorus_maculatus