EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000007208 (Gene tree)
Gene ID: 102010157
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 33392 bases
Position: chrJH721877.1:13823057-13856448
Accession: 102010157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000010432	POP1	PF06978.11	1.8e-35	1	2
ENSCLAP00000010432	POP1	PF06978.11	1.8e-35	2	2
ENSCLAP00000010432	POPLD	PF08170.12	1.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000010563	POP1-201	3833	XM_005381847	ENSCLAP00000010432	1052 (aa)	XP_005381904	UPI00038ECD92

Gene Model

Click here to download ENSCLAG00000007208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000007208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000007208	POP1	97	82.520	ENSG00000104356	POP1	100	90.164	Homo_sapiens
ENSCLAG00000007208	POP1	97	48.718	ENSAPOG00000008198	pop1	100	48.623	Acanthochromis_polyacanthus
ENSCLAG00000007208	POP1	97	79.515	ENSAMEG00000000556	POP1	100	79.515	Ailuropoda_melanoleuca
ENSCLAG00000007208	POP1	87	50.160	ENSACIG00000004169	POP1	100	47.217	Amphilophus_citrinellus
ENSCLAG00000007208	POP1	97	47.723	ENSAOCG00000010991	pop1	100	47.818	Amphiprion_ocellaris
ENSCLAG00000007208	POP1	88	47.451	ENSAPEG00000007607	pop1	96	48.179	Amphiprion_percula
ENSCLAG00000007208	POP1	97	47.175	ENSATEG00000024814	POP1	100	47.398	Anabas_testudineus
ENSCLAG00000007208	POP1	89	61.064	ENSAPLG00000014418	POP1	99	60.957	Anas_platyrhynchos
ENSCLAG00000007208	POP1	97	55.459	ENSACAG00000016083	POP1	100	55.459	Anolis_carolinensis
ENSCLAG00000007208	POP1	85	87.537	ENSANAG00000026360	POP1	99	87.537	Aotus_nancymaae
ENSCLAG00000007208	POP1	97	48.325	ENSACLG00000010951	pop1	100	48.517	Astatotilapia_calliptera
ENSCLAG00000007208	POP1	97	46.574	ENSAMXG00000014483	POP1	100	46.574	Astyanax_mexicanus
ENSCLAG00000007208	POP1	97	77.344	ENSBTAG00000012596	POP1	100	77.344	Bos_taurus
ENSCLAG00000007208	POP1	97	81.348	ENSCJAG00000015567	POP1	100	81.348	Callithrix_jacchus
ENSCLAG00000007208	POP1	97	79.646	ENSCAFG00000000469	POP1	100	79.646	Canis_familiaris
ENSCLAG00000007208	POP1	97	80.078	ENSCAFG00020026765	POP1	100	80.078	Canis_lupus_dingo
ENSCLAG00000007208	POP1	97	77.561	ENSCHIG00000017066	POP1	100	77.756	Capra_hircus
ENSCLAG00000007208	POP1	97	81.738	ENSTSYG00000003097	POP1	100	81.738	Carlito_syrichta
ENSCLAG00000007208	POP1	97	85.421	ENSCAPG00000007251	POP1	100	85.421	Cavia_aperea
ENSCLAG00000007208	POP1	97	88.791	ENSCPOG00000002901	POP1	100	88.791	Cavia_porcellus
ENSCLAG00000007208	POP1	97	80.859	ENSCCAG00000018939	POP1	100	80.859	Cebus_capucinus
ENSCLAG00000007208	POP1	97	81.738	ENSCATG00000040916	POP1	100	81.738	Cercocebus_atys
ENSCLAG00000007208	POP1	87	81.887	ENSCSAG00000012340	POP1	99	81.887	Chlorocebus_sabaeus
ENSCLAG00000007208	POP1	92	76.230	ENSCHOG00000011432	POP1	100	76.230	Choloepus_hoffmanni
ENSCLAG00000007208	POP1	97	63.601	ENSCPBG00000006373	POP1	100	63.220	Chrysemys_picta_bellii
ENSCLAG00000007208	POP1	79	38.911	ENSCING00000008323	-	90	37.722	Ciona_intestinalis
ENSCLAG00000007208	POP1	97	81.934	ENSCANG00000001647	POP1	100	81.934	Colobus_angolensis_palliatus
ENSCLAG00000007208	POP1	97	77.397	ENSCGRG00001017308	Pop1	100	77.397	Cricetulus_griseus_chok1gshd
ENSCLAG00000007208	POP1	97	71.820	ENSCGRG00000010824	Pop1	100	71.820	Cricetulus_griseus_crigri
ENSCLAG00000007208	POP1	97	45.956	ENSCSEG00000008737	POP1	100	46.051	Cynoglossus_semilaevis
ENSCLAG00000007208	POP1	97	47.323	ENSCVAG00000022248	pop1	100	46.786	Cyprinodon_variegatus
ENSCLAG00000007208	POP1	97	74.929	ENSDNOG00000019974	POP1	100	74.929	Dasypus_novemcinctus
ENSCLAG00000007208	POP1	97	72.515	ENSDORG00000015384	Pop1	100	72.515	Dipodomys_ordii
ENSCLAG00000007208	POP1	59	34.321	FBgn0026702	l(1)G0045	69	34.326	Drosophila_melanogaster
ENSCLAG00000007208	POP1	86	69.580	ENSETEG00000007839	POP1	88	69.580	Echinops_telfairi
ENSCLAG00000007208	POP1	98	80.230	ENSEASG00005003189	POP1	99	80.230	Equus_asinus_asinus
ENSCLAG00000007208	POP1	97	80.957	ENSECAG00000024236	POP1	100	80.957	Equus_caballus
ENSCLAG00000007208	POP1	65	69.604	ENSEEUG00000003050	-	70	69.604	Erinaceus_europaeus
ENSCLAG00000007208	POP1	97	46.699	ENSELUG00000003526	pop1	100	46.794	Esox_lucius
ENSCLAG00000007208	POP1	97	80.957	ENSFCAG00000002168	POP1	100	80.957	Felis_catus
ENSCLAG00000007208	POP1	97	58.309	ENSFALG00000005711	POP1	100	58.058	Ficedula_albicollis
ENSCLAG00000007208	POP1	97	88.074	ENSFDAG00000017068	POP1	100	88.074	Fukomys_damarensis
ENSCLAG00000007208	POP1	97	46.545	ENSFHEG00000019518	pop1	100	46.833	Fundulus_heteroclitus
ENSCLAG00000007208	POP1	90	46.020	ENSGMOG00000000659	POP1	98	45.657	Gadus_morhua
ENSCLAG00000007208	POP1	97	46.622	ENSGAFG00000019770	POP1	100	46.718	Gambusia_affinis
ENSCLAG00000007208	POP1	97	46.490	ENSGACG00000003499	pop1	100	46.300	Gasterosteus_aculeatus
ENSCLAG00000007208	POP1	97	62.669	ENSGAGG00000011737	POP1	99	63.071	Gopherus_agassizii
ENSCLAG00000007208	POP1	97	82.129	ENSGGOG00000003176	POP1	100	82.129	Gorilla_gorilla
ENSCLAG00000007208	POP1	97	48.384	ENSHBUG00000021583	pop1	100	48.421	Haplochromis_burtoni
ENSCLAG00000007208	POP1	97	87.195	ENSHGLG00000006029	POP1	100	87.195	Heterocephalus_glaber_female
ENSCLAG00000007208	POP1	97	87.195	ENSHGLG00100016879	POP1	100	87.195	Heterocephalus_glaber_male
ENSCLAG00000007208	POP1	87	49.893	ENSHCOG00000013888	pop1	96	49.893	Hippocampus_comes
ENSCLAG00000007208	POP1	97	45.229	ENSIPUG00000018336	pop1	100	45.229	Ictalurus_punctatus
ENSCLAG00000007208	POP1	98	82.205	ENSSTOG00000011455	POP1	100	81.594	Ictidomys_tridecemlineatus
ENSCLAG00000007208	POP1	97	75.910	ENSJJAG00000013325	Pop1	100	75.910	Jaculus_jaculus
ENSCLAG00000007208	POP1	97	47.019	ENSKMAG00000001346	POP1	100	47.019	Kryptolebias_marmoratus
ENSCLAG00000007208	POP1	86	48.205	ENSLBEG00000024457	POP1	95	48.026	Labrus_bergylta
ENSCLAG00000007208	POP1	90	55.870	ENSLACG00000012498	POP1	99	55.769	Latimeria_chalumnae
ENSCLAG00000007208	POP1	97	50.723	ENSLOCG00000009817	POP1	100	50.918	Lepisosteus_oculatus
ENSCLAG00000007208	POP1	97	80.235	ENSLAFG00000010770	POP1	100	80.235	Loxodonta_africana
ENSCLAG00000007208	POP1	97	82.129	ENSMFAG00000000347	POP1	100	82.129	Macaca_fascicularis
ENSCLAG00000007208	POP1	97	81.738	ENSMNEG00000036870	POP1	100	81.738	Macaca_nemestrina
ENSCLAG00000007208	POP1	97	81.934	ENSMLEG00000034986	POP1	100	81.934	Mandrillus_leucophaeus
ENSCLAG00000007208	POP1	97	46.445	ENSMAMG00000004040	pop1	100	46.825	Mastacembelus_armatus
ENSCLAG00000007208	POP1	97	48.574	ENSMZEG00005025448	pop1	100	48.612	Maylandia_zebra
ENSCLAG00000007208	POP1	97	56.979	ENSMGAG00000012167	POP1	100	57.116	Meleagris_gallopavo
ENSCLAG00000007208	POP1	97	76.517	ENSMAUG00000017537	Pop1	100	76.027	Mesocricetus_auratus
ENSCLAG00000007208	POP1	97	81.427	ENSMICG00000004361	POP1	100	81.427	Microcebus_murinus
ENSCLAG00000007208	POP1	97	76.078	ENSMOCG00000006356	Pop1	100	76.667	Microtus_ochrogaster
ENSCLAG00000007208	POP1	97	45.029	ENSMMOG00000018242	pop1	100	44.834	Mola_mola
ENSCLAG00000007208	POP1	97	66.505	ENSMODG00000006561	POP1	100	67.086	Monodelphis_domestica
ENSCLAG00000007208	POP1	90	50.606	ENSMALG00000012621	POP1	100	46.540	Monopterus_albus
ENSCLAG00000007208	POP1	97	76.983	MGP_CAROLIEiJ_G0019726	Pop1	100	76.983	Mus_caroli
ENSCLAG00000007208	POP1	97	76.983	ENSMUSG00000022325	Pop1	100	76.983	Mus_musculus
ENSCLAG00000007208	POP1	97	77.081	MGP_PahariEiJ_G0019735	Pop1	100	77.081	Mus_pahari
ENSCLAG00000007208	POP1	97	76.787	MGP_SPRETEiJ_G0020622	Pop1	100	76.787	Mus_spretus
ENSCLAG00000007208	POP1	97	80.350	ENSMPUG00000015250	POP1	100	80.350	Mustela_putorius_furo
ENSCLAG00000007208	POP1	97	75.049	ENSMLUG00000010204	POP1	100	75.049	Myotis_lucifugus
ENSCLAG00000007208	POP1	97	80.841	ENSNGAG00000001582	Pop1	100	80.841	Nannospalax_galili
ENSCLAG00000007208	POP1	86	48.922	ENSNBRG00000002356	pop1	94	49.095	Neolamprologus_brichardi
ENSCLAG00000007208	POP1	97	81.543	ENSNLEG00000002541	POP1	100	81.543	Nomascus_leucogenys
ENSCLAG00000007208	POP1	89	60.127	ENSMEUG00000003118	POP1	97	60.127	Notamacropus_eugenii
ENSCLAG00000007208	POP1	97	76.500	ENSOPRG00000007667	POP1	100	76.500	Ochotona_princeps
ENSCLAG00000007208	POP1	97	88.518	ENSODEG00000003984	POP1	100	88.518	Octodon_degus
ENSCLAG00000007208	POP1	97	49.284	ENSONIG00000016445	pop1	100	49.284	Oreochromis_niloticus
ENSCLAG00000007208	POP1	59	65.761	ENSOANG00000001278	-	95	65.761	Ornithorhynchus_anatinus
ENSCLAG00000007208	POP1	97	79.689	ENSOCUG00000017400	POP1	100	79.689	Oryctolagus_cuniculus
ENSCLAG00000007208	POP1	89	49.525	ENSORLG00000002839	pop1	100	47.527	Oryzias_latipes
ENSCLAG00000007208	POP1	87	49.085	ENSORLG00020022450	POP1	96	49.193	Oryzias_latipes_hni
ENSCLAG00000007208	POP1	89	49.578	ENSORLG00015012746	POP1	100	47.721	Oryzias_latipes_hsok
ENSCLAG00000007208	POP1	97	47.563	ENSOMEG00000006915	pop1	99	47.661	Oryzias_melastigma
ENSCLAG00000007208	POP1	97	80.645	ENSOGAG00000001466	POP1	100	80.645	Otolemur_garnettii
ENSCLAG00000007208	POP1	97	82.422	ENSPPAG00000018410	POP1	100	82.422	Pan_paniscus
ENSCLAG00000007208	POP1	97	80.780	ENSPPRG00000005002	POP1	100	80.780	Panthera_pardus
ENSCLAG00000007208	POP1	97	80.976	ENSPTIG00000016527	POP1	100	80.976	Panthera_tigris_altaica
ENSCLAG00000007208	POP1	97	82.422	ENSPTRG00000020458	POP1	100	82.422	Pan_troglodytes
ENSCLAG00000007208	POP1	97	81.934	ENSPANG00000009704	POP1	100	81.934	Papio_anubis
ENSCLAG00000007208	POP1	97	48.853	ENSPKIG00000016325	POP1	100	48.612	Paramormyrops_kingsleyae
ENSCLAG00000007208	POP1	97	62.049	ENSPSIG00000012343	POP1	100	61.770	Pelodiscus_sinensis
ENSCLAG00000007208	POP1	87	48.757	ENSPMGG00000022253	POP1	95	48.837	Periophthalmus_magnuspinnatus
ENSCLAG00000007208	POP1	97	74.976	ENSPEMG00000023633	Pop1	100	74.976	Peromyscus_maniculatus_bairdii
ENSCLAG00000007208	POP1	87	44.444	ENSPMAG00000003209	POP1	100	44.597	Petromyzon_marinus
ENSCLAG00000007208	POP1	97	66.667	ENSPCIG00000012216	POP1	100	66.571	Phascolarctos_cinereus
ENSCLAG00000007208	POP1	97	47.485	ENSPFOG00000012490	POP1	100	47.064	Poecilia_formosa
ENSCLAG00000007208	POP1	97	47.241	ENSPLAG00000004646	POP1	100	46.821	Poecilia_latipinna
ENSCLAG00000007208	POP1	97	47.729	ENSPMEG00000019592	POP1	100	47.308	Poecilia_mexicana
ENSCLAG00000007208	POP1	97	46.770	ENSPREG00000020951	POP1	100	46.770	Poecilia_reticulata
ENSCLAG00000007208	POP1	97	82.129	ENSPPYG00000018777	POP1	100	82.129	Pongo_abelii
ENSCLAG00000007208	POP1	97	73.405	ENSPCAG00000016662	POP1	100	73.405	Procavia_capensis
ENSCLAG00000007208	POP1	97	82.307	ENSPCOG00000019420	POP1	100	82.307	Propithecus_coquereli
ENSCLAG00000007208	POP1	97	78.049	ENSPVAG00000014468	POP1	100	78.049	Pteropus_vampyrus
ENSCLAG00000007208	POP1	86	49.459	ENSPNYG00000004476	pop1	99	48.423	Pundamilia_nyererei
ENSCLAG00000007208	POP1	97	45.429	ENSPNAG00000000265	pop1	100	43.303	Pygocentrus_nattereri
ENSCLAG00000007208	POP1	97	76.885	ENSRNOG00000005243	Pop1	100	76.885	Rattus_norvegicus
ENSCLAG00000007208	POP1	97	81.641	ENSRBIG00000007996	POP1	100	81.641	Rhinopithecus_bieti
ENSCLAG00000007208	POP1	97	81.836	ENSRROG00000012334	POP1	100	81.836	Rhinopithecus_roxellana
ENSCLAG00000007208	POP1	96	82.312	ENSSBOG00000020830	POP1	100	82.312	Saimiri_boliviensis_boliviensis
ENSCLAG00000007208	POP1	97	66.473	ENSSHAG00000000296	POP1	100	66.473	Sarcophilus_harrisii
ENSCLAG00000007208	POP1	97	47.867	ENSSFOG00015007429	pop1	99	47.678	Scleropages_formosus
ENSCLAG00000007208	POP1	82	52.508	ENSSMAG00000010467	POP1	97	47.418	Scophthalmus_maximus
ENSCLAG00000007208	POP1	97	47.249	ENSSDUG00000007817	POP1	100	47.249	Seriola_dumerili
ENSCLAG00000007208	POP1	97	47.393	ENSSLDG00000012565	POP1	100	47.488	Seriola_lalandi_dorsalis
ENSCLAG00000007208	POP1	97	57.576	ENSSPUG00000003550	-	100	57.854	Sphenodon_punctatus
ENSCLAG00000007208	POP1	87	49.946	ENSSPAG00000014955	pop1	94	50.054	Stegastes_partitus
ENSCLAG00000007208	POP1	97	77.713	ENSSSCG00000006078	POP1	100	77.713	Sus_scrofa
ENSCLAG00000007208	POP1	89	56.051	ENSTGUG00000012011	-	100	56.051	Taeniopygia_guttata
ENSCLAG00000007208	POP1	88	48.097	ENSTRUG00000010856	pop1	94	47.424	Takifugu_rubripes
ENSCLAG00000007208	POP1	89	48.750	ENSTNIG00000013297	pop1	99	48.545	Tetraodon_nigroviridis
ENSCLAG00000007208	POP1	92	78.096	ENSTBEG00000014214	POP1	100	78.096	Tupaia_belangeri
ENSCLAG00000007208	POP1	97	77.344	ENSTTRG00000016071	POP1	100	77.344	Tursiops_truncatus
ENSCLAG00000007208	POP1	96	77.196	ENSUAMG00000017309	POP1	100	77.196	Ursus_americanus
ENSCLAG00000007208	POP1	97	79.574	ENSUMAG00000016952	POP1	100	88.259	Ursus_maritimus
ENSCLAG00000007208	POP1	80	88.278	ENSVPAG00000008278	POP1	82	88.278	Vicugna_pacos
ENSCLAG00000007208	POP1	97	80.273	ENSVVUG00000010994	POP1	100	80.273	Vulpes_vulpes
ENSCLAG00000007208	POP1	97	42.445	ENSXCOG00000017043	POP1	100	42.050	Xiphophorus_couchianus
ENSCLAG00000007208	POP1	97	46.035	ENSXMAG00000002472	POP1	100	45.621	Xiphophorus_maculatus