EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000007363 (Gene tree)
Gene ID: 102012016
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 6629 bases
Position: chrJH721893.1:15572881-15579509
Accession: 102012016
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000010671	HVSL	PF09749.9	8e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000010803	USB1-201	854	XM_005388505	ENSCLAP00000010671	176 (aa)	XP_005388562	-

Gene Model

Click here to download ENSCLAG00000007363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000007363's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000007363	USB1	100	85.795	ENSG00000103005	USB1	82	85.795	Homo_sapiens
ENSCLAG00000007363	USB1	87	52.941	ENSAPOG00000011942	usb1	61	51.445	Acanthochromis_polyacanthus
ENSCLAG00000007363	USB1	100	89.773	ENSAMEG00000017205	USB1	65	89.773	Ailuropoda_melanoleuca
ENSCLAG00000007363	USB1	98	56.069	ENSACIG00000012234	usb1	63	56.069	Amphilophus_citrinellus
ENSCLAG00000007363	USB1	87	54.902	ENSAOCG00000014831	usb1	61	53.179	Amphiprion_ocellaris
ENSCLAG00000007363	USB1	87	55.556	ENSAPEG00000000296	usb1	61	53.757	Amphiprion_percula
ENSCLAG00000007363	USB1	87	55.556	ENSATEG00000009348	usb1	61	53.757	Anabas_testudineus
ENSCLAG00000007363	USB1	93	69.325	ENSAPLG00000002756	USB1	78	68.182	Anas_platyrhynchos
ENSCLAG00000007363	USB1	99	60.571	ENSACAG00000015481	USB1	76	60.571	Anolis_carolinensis
ENSCLAG00000007363	USB1	100	86.932	ENSANAG00000035640	USB1	66	86.932	Aotus_nancymaae
ENSCLAG00000007363	USB1	98	53.757	ENSACLG00000020586	usb1	61	53.757	Astatotilapia_calliptera
ENSCLAG00000007363	USB1	99	46.286	ENSAMXG00000040146	usb1	58	46.286	Astyanax_mexicanus
ENSCLAG00000007363	USB1	100	87.500	ENSBTAG00000015758	USB1	66	87.500	Bos_taurus
ENSCLAG00000007363	USB1	100	88.068	ENSCJAG00000011733	USB1	66	88.068	Callithrix_jacchus
ENSCLAG00000007363	USB1	99	88.571	ENSCAFG00020009263	USB1	66	88.571	Canis_lupus_dingo
ENSCLAG00000007363	USB1	100	86.364	ENSCHIG00000024290	USB1	66	86.364	Capra_hircus
ENSCLAG00000007363	USB1	100	89.773	ENSTSYG00000006997	USB1	66	89.773	Carlito_syrichta
ENSCLAG00000007363	USB1	100	75.000	ENSCAPG00000009057	USB1	72	75.000	Cavia_aperea
ENSCLAG00000007363	USB1	100	95.455	ENSCPOG00000014325	USB1	66	95.455	Cavia_porcellus
ENSCLAG00000007363	USB1	100	86.932	ENSCCAG00000022132	USB1	66	86.932	Cebus_capucinus
ENSCLAG00000007363	USB1	100	88.068	ENSCATG00000032174	USB1	66	88.068	Cercocebus_atys
ENSCLAG00000007363	USB1	100	88.068	ENSCSAG00000004783	USB1	66	88.068	Chlorocebus_sabaeus
ENSCLAG00000007363	USB1	93	68.712	ENSCPBG00000026943	USB1	63	66.667	Chrysemys_picta_bellii
ENSCLAG00000007363	USB1	84	31.126	ENSCING00000011490	-	58	30.719	Ciona_intestinalis
ENSCLAG00000007363	USB1	82	30.201	ENSCSAVG00000000894	-	54	30.201	Ciona_savignyi
ENSCLAG00000007363	USB1	100	87.500	ENSCANG00000037135	USB1	67	87.500	Colobus_angolensis_palliatus
ENSCLAG00000007363	USB1	100	88.068	ENSCGRG00001011243	USB1	66	88.068	Cricetulus_griseus_chok1gshd
ENSCLAG00000007363	USB1	100	88.068	ENSCGRG00000013252	USB1	66	88.068	Cricetulus_griseus_crigri
ENSCLAG00000007363	USB1	98	49.711	ENSCSEG00000013881	usb1	62	49.711	Cynoglossus_semilaevis
ENSCLAG00000007363	USB1	87	51.634	ENSCVAG00000009252	usb1	74	49.133	Cyprinodon_variegatus
ENSCLAG00000007363	USB1	100	47.159	ENSDARG00000003841	usb1	64	47.159	Danio_rerio
ENSCLAG00000007363	USB1	100	85.227	ENSDORG00000001888	Usb1	66	85.227	Dipodomys_ordii
ENSCLAG00000007363	USB1	85	37.333	FBgn0037713	CG16790	56	37.333	Drosophila_melanogaster
ENSCLAG00000007363	USB1	98	68.786	ENSETEG00000019682	USB1	65	68.786	Echinops_telfairi
ENSCLAG00000007363	USB1	99	46.552	ENSEBUG00000005889	usb1	60	47.093	Eptatretus_burgeri
ENSCLAG00000007363	USB1	100	88.636	ENSEASG00005005484	USB1	66	88.636	Equus_asinus_asinus
ENSCLAG00000007363	USB1	100	88.636	ENSECAG00000019493	USB1	61	88.636	Equus_caballus
ENSCLAG00000007363	USB1	100	79.545	ENSEEUG00000000154	USB1	66	79.545	Erinaceus_europaeus
ENSCLAG00000007363	USB1	98	46.243	ENSELUG00000010974	usb1	63	46.243	Esox_lucius
ENSCLAG00000007363	USB1	100	89.205	ENSFCAG00000002693	USB1	66	89.205	Felis_catus
ENSCLAG00000007363	USB1	91	65.000	ENSFALG00000006876	USB1	66	63.429	Ficedula_albicollis
ENSCLAG00000007363	USB1	100	94.886	ENSFDAG00000010052	USB1	66	94.886	Fukomys_damarensis
ENSCLAG00000007363	USB1	71	52.000	ENSFHEG00000012334	usb1	55	48.630	Fundulus_heteroclitus
ENSCLAG00000007363	USB1	87	50.327	ENSGMOG00000004228	usb1	77	48.555	Gadus_morhua
ENSCLAG00000007363	USB1	91	70.186	ENSGALG00000035604	USB1	69	68.182	Gallus_gallus
ENSCLAG00000007363	USB1	87	53.595	ENSGAFG00000021890	usb1	62	51.445	Gambusia_affinis
ENSCLAG00000007363	USB1	85	53.691	ENSGACG00000003257	usb1	62	50.867	Gasterosteus_aculeatus
ENSCLAG00000007363	USB1	91	68.944	ENSGAGG00000022572	USB1	64	66.092	Gopherus_agassizii
ENSCLAG00000007363	USB1	100	86.364	ENSGGOG00000017147	USB1	66	86.364	Gorilla_gorilla
ENSCLAG00000007363	USB1	98	54.335	ENSHBUG00000009823	usb1	61	54.335	Haplochromis_burtoni
ENSCLAG00000007363	USB1	100	92.614	ENSHGLG00000016078	USB1	64	92.614	Heterocephalus_glaber_female
ENSCLAG00000007363	USB1	100	92.614	ENSHGLG00100005562	USB1	64	92.614	Heterocephalus_glaber_male
ENSCLAG00000007363	USB1	98	52.907	ENSHCOG00000015633	usb1	66	52.907	Hippocampus_comes
ENSCLAG00000007363	USB1	97	52.047	ENSIPUG00000008601	usb1	59	52.047	Ictalurus_punctatus
ENSCLAG00000007363	USB1	100	89.773	ENSSTOG00000007548	USB1	64	89.773	Ictidomys_tridecemlineatus
ENSCLAG00000007363	USB1	100	89.773	ENSJJAG00000021859	Usb1	66	89.773	Jaculus_jaculus
ENSCLAG00000007363	USB1	87	52.941	ENSKMAG00000007200	usb1	61	52.023	Kryptolebias_marmoratus
ENSCLAG00000007363	USB1	97	55.172	ENSLACG00000000105	USB1	54	59.236	Latimeria_chalumnae
ENSCLAG00000007363	USB1	98	54.335	ENSLOCG00000000465	usb1	61	54.335	Lepisosteus_oculatus
ENSCLAG00000007363	USB1	81	74.126	ENSLAFG00000002267	USB1	53	74.825	Loxodonta_africana
ENSCLAG00000007363	USB1	100	88.068	ENSMFAG00000003926	USB1	66	88.068	Macaca_fascicularis
ENSCLAG00000007363	USB1	100	88.068	ENSMMUG00000022669	USB1	66	88.068	Macaca_mulatta
ENSCLAG00000007363	USB1	100	87.500	ENSMNEG00000042487	USB1	66	87.500	Macaca_nemestrina
ENSCLAG00000007363	USB1	100	88.068	ENSMLEG00000028756	USB1	66	88.068	Mandrillus_leucophaeus
ENSCLAG00000007363	USB1	87	55.556	ENSMAMG00000015092	usb1	62	53.757	Mastacembelus_armatus
ENSCLAG00000007363	USB1	98	53.757	ENSMZEG00005010008	usb1	61	53.757	Maylandia_zebra
ENSCLAG00000007363	USB1	100	85.227	ENSMAUG00000007832	Usb1	66	85.227	Mesocricetus_auratus
ENSCLAG00000007363	USB1	100	86.932	ENSMICG00000004900	USB1	66	86.932	Microcebus_murinus
ENSCLAG00000007363	USB1	100	84.091	ENSMOCG00000022647	Usb1	66	84.091	Microtus_ochrogaster
ENSCLAG00000007363	USB1	98	52.023	ENSMMOG00000000490	usb1	67	52.023	Mola_mola
ENSCLAG00000007363	USB1	100	73.295	ENSMODG00000014067	USB1	66	73.295	Monodelphis_domestica
ENSCLAG00000007363	USB1	99	54.023	ENSMALG00000005930	usb1	61	54.023	Monopterus_albus
ENSCLAG00000007363	USB1	100	84.659	MGP_CAROLIEiJ_G0031421	Usb1	66	84.659	Mus_caroli
ENSCLAG00000007363	USB1	100	85.795	ENSMUSG00000031792	Usb1	66	85.795	Mus_musculus
ENSCLAG00000007363	USB1	100	86.932	MGP_PahariEiJ_G0023019	Usb1	66	86.932	Mus_pahari
ENSCLAG00000007363	USB1	100	84.091	MGP_SPRETEiJ_G0032540	Usb1	66	84.091	Mus_spretus
ENSCLAG00000007363	USB1	100	85.795	ENSMPUG00000004684	USB1	63	85.795	Mustela_putorius_furo
ENSCLAG00000007363	USB1	100	89.773	ENSMLUG00000007400	USB1	76	89.773	Myotis_lucifugus
ENSCLAG00000007363	USB1	100	89.205	ENSNGAG00000009703	Usb1	65	89.205	Nannospalax_galili
ENSCLAG00000007363	USB1	98	52.601	ENSNBRG00000008747	usb1	79	52.601	Neolamprologus_brichardi
ENSCLAG00000007363	USB1	91	86.335	ENSNLEG00000003340	USB1	64	86.335	Nomascus_leucogenys
ENSCLAG00000007363	USB1	100	95.455	ENSODEG00000016214	USB1	66	95.455	Octodon_degus
ENSCLAG00000007363	USB1	98	54.335	ENSONIG00000011063	usb1	62	54.335	Oreochromis_niloticus
ENSCLAG00000007363	USB1	100	70.455	ENSOANG00000012118	USB1	74	70.455	Ornithorhynchus_anatinus
ENSCLAG00000007363	USB1	87	52.941	ENSORLG00000012479	usb1	63	50.867	Oryzias_latipes
ENSCLAG00000007363	USB1	87	52.288	ENSORLG00020018671	usb1	63	50.289	Oryzias_latipes_hni
ENSCLAG00000007363	USB1	87	52.941	ENSORLG00015009679	usb1	64	50.867	Oryzias_latipes_hsok
ENSCLAG00000007363	USB1	87	50.980	ENSOMEG00000012930	usb1	62	49.711	Oryzias_melastigma
ENSCLAG00000007363	USB1	100	77.841	ENSOGAG00000003273	USB1	64	77.841	Otolemur_garnettii
ENSCLAG00000007363	USB1	100	87.500	ENSOARG00000001107	USB1	67	87.500	Ovis_aries
ENSCLAG00000007363	USB1	100	86.932	ENSPPAG00000042137	USB1	66	86.932	Pan_paniscus
ENSCLAG00000007363	USB1	100	88.068	ENSPPRG00000024797	USB1	66	88.068	Panthera_pardus
ENSCLAG00000007363	USB1	100	87.500	ENSPTIG00000007506	USB1	66	87.500	Panthera_tigris_altaica
ENSCLAG00000007363	USB1	100	86.932	ENSPTRG00000008172	USB1	82	86.932	Pan_troglodytes
ENSCLAG00000007363	USB1	100	88.068	ENSPANG00000025138	USB1	66	88.068	Papio_anubis
ENSCLAG00000007363	USB1	96	50.000	ENSPSIG00000004305	USB1	75	50.000	Pelodiscus_sinensis
ENSCLAG00000007363	USB1	98	51.163	ENSPMGG00000017725	usb1	66	51.163	Periophthalmus_magnuspinnatus
ENSCLAG00000007363	USB1	100	85.227	ENSPEMG00000016183	Usb1	65	85.227	Peromyscus_maniculatus_bairdii
ENSCLAG00000007363	USB1	98	49.419	ENSPMAG00000000462	usb1	73	49.419	Petromyzon_marinus
ENSCLAG00000007363	USB1	87	53.595	ENSPFOG00000011130	usb1	62	51.445	Poecilia_formosa
ENSCLAG00000007363	USB1	87	53.595	ENSPLAG00000009820	usb1	62	50.867	Poecilia_latipinna
ENSCLAG00000007363	USB1	87	53.595	ENSPMEG00000006402	usb1	62	51.445	Poecilia_mexicana
ENSCLAG00000007363	USB1	70	55.285	ENSPREG00000001047	usb1	56	53.957	Poecilia_reticulata
ENSCLAG00000007363	USB1	92	81.595	ENSPPYG00000007401	USB1	65	81.595	Pongo_abelii
ENSCLAG00000007363	USB1	100	88.636	ENSPCOG00000022612	USB1	66	88.636	Propithecus_coquereli
ENSCLAG00000007363	USB1	100	86.364	ENSPVAG00000004613	USB1	68	86.364	Pteropus_vampyrus
ENSCLAG00000007363	USB1	98	54.335	ENSPNYG00000022262	usb1	61	54.335	Pundamilia_nyererei
ENSCLAG00000007363	USB1	100	46.591	ENSPNAG00000011736	usb1	58	47.368	Pygocentrus_nattereri
ENSCLAG00000007363	USB1	100	86.364	ENSRNOG00000013216	Usb1	66	86.364	Rattus_norvegicus
ENSCLAG00000007363	USB1	100	88.068	ENSRBIG00000044466	USB1	82	88.068	Rhinopithecus_bieti
ENSCLAG00000007363	USB1	100	88.068	ENSRROG00000029211	USB1	66	88.068	Rhinopithecus_roxellana
ENSCLAG00000007363	USB1	100	86.932	ENSSBOG00000029362	USB1	66	86.932	Saimiri_boliviensis_boliviensis
ENSCLAG00000007363	USB1	100	73.295	ENSSHAG00000006993	USB1	70	73.295	Sarcophilus_harrisii
ENSCLAG00000007363	USB1	97	58.824	ENSSFOG00015023663	usb1	53	58.824	Scleropages_formosus
ENSCLAG00000007363	USB1	87	52.695	ENSSMAG00000015834	usb1	63	51.337	Scophthalmus_maximus
ENSCLAG00000007363	USB1	91	54.375	ENSSDUG00000002949	usb1	64	54.335	Seriola_dumerili
ENSCLAG00000007363	USB1	87	56.209	ENSSLDG00000014174	usb1	61	54.335	Seriola_lalandi_dorsalis
ENSCLAG00000007363	USB1	100	63.636	ENSSPUG00000006741	USB1	82	63.636	Sphenodon_punctatus
ENSCLAG00000007363	USB1	87	54.248	ENSSPAG00000007484	usb1	61	52.601	Stegastes_partitus
ENSCLAG00000007363	USB1	100	90.341	ENSSSCG00000002807	USB1	66	90.341	Sus_scrofa
ENSCLAG00000007363	USB1	91	67.500	ENSTGUG00000004792	USB1	69	65.714	Taeniopygia_guttata
ENSCLAG00000007363	USB1	100	49.432	ENSTRUG00000021069	usb1	65	49.432	Takifugu_rubripes
ENSCLAG00000007363	USB1	84	55.405	ENSTNIG00000000626	usb1	60	55.405	Tetraodon_nigroviridis
ENSCLAG00000007363	USB1	84	60.544	ENSTBEG00000001507	USB1	63	60.544	Tupaia_belangeri
ENSCLAG00000007363	USB1	100	88.068	ENSUAMG00000016823	USB1	65	88.068	Ursus_americanus
ENSCLAG00000007363	USB1	100	88.068	ENSUMAG00000021369	USB1	82	88.068	Ursus_maritimus
ENSCLAG00000007363	USB1	65	92.105	ENSVPAG00000009834	-	57	92.105	Vicugna_pacos
ENSCLAG00000007363	USB1	99	88.571	ENSVVUG00000023700	USB1	68	88.571	Vulpes_vulpes
ENSCLAG00000007363	USB1	99	55.429	ENSXETG00000013795	usb1	70	55.429	Xenopus_tropicalis
ENSCLAG00000007363	USB1	87	53.595	ENSXMAG00000024687	usb1	51	51.445	Xiphophorus_maculatus