EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000007522 (Gene tree)
Gene ID: 102023719
Gene Symbol: SUB1
Alias: PC4|p14|p15
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 14511 bases
Position: chrJH721886.1:18380117-18394627
Accession: 102023719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000010899	PC4	PF02229.16	5.9e-25	1	1
ENSCLAP00000010900	PC4	PF02229.16	5.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000011035	SUB1-202	1559	XM_005386160	ENSCLAP00000010900	128 (aa)	XP_005386217	UPI00038EF6EF
ENSCLAT00000011034	SUB1-201	1038	XM_005386159	ENSCLAP00000010899	128 (aa)	XP_005386216	UPI00038EF6EF

Gene Model

Click here to download ENSCLAG00000007522's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000007522's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000007522	SUB1	100	75.000	ENSCLAG00000002685	-	100	75.781

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000007522	SUB1	100	99.219	ENSG00000113387	SUB1	100	99.219	Homo_sapiens
ENSCLAG00000007522	SUB1	100	68.750	ENSAPOG00000005917	SUB1	100	64.844	Acanthochromis_polyacanthus
ENSCLAG00000007522	SUB1	100	98.438	ENSAMEG00000006238	SUB1	95	98.438	Ailuropoda_melanoleuca
ENSCLAG00000007522	SUB1	100	71.094	ENSACIG00000015976	sub1b	100	67.188	Amphilophus_citrinellus
ENSCLAG00000007522	SUB1	85	69.725	ENSAOCG00000002323	-	75	72.043	Amphiprion_ocellaris
ENSCLAG00000007522	SUB1	91	67.521	ENSAOCG00000007313	-	82	72.816	Amphiprion_ocellaris
ENSCLAG00000007522	SUB1	62	63.291	ENSAPEG00000014618	-	62	70.769	Amphiprion_percula
ENSCLAG00000007522	SUB1	88	65.487	ENSAPEG00000017151	-	71	72.043	Amphiprion_percula
ENSCLAG00000007522	SUB1	100	71.875	ENSAPEG00000024347	sub1b	100	67.969	Amphiprion_percula
ENSCLAG00000007522	SUB1	100	71.094	ENSATEG00000010340	sub1b	100	67.188	Anabas_testudineus
ENSCLAG00000007522	SUB1	100	79.259	ENSACAG00000007974	SUB1	100	79.259	Anolis_carolinensis
ENSCLAG00000007522	SUB1	100	99.219	ENSANAG00000011651	-	100	99.219	Aotus_nancymaae
ENSCLAG00000007522	SUB1	100	94.531	ENSANAG00000023392	-	83	94.531	Aotus_nancymaae
ENSCLAG00000007522	SUB1	100	71.094	ENSACLG00000016875	sub1b	64	69.531	Astatotilapia_calliptera
ENSCLAG00000007522	SUB1	100	77.344	ENSAMXG00000037104	sub1b	100	71.875	Astyanax_mexicanus
ENSCLAG00000007522	SUB1	100	98.438	ENSBTAG00000021965	SUB1	100	98.438	Bos_taurus
ENSCLAG00000007522	SUB1	80	99.029	ENSCJAG00000018718	SUB1	98	99.029	Callithrix_jacchus
ENSCLAG00000007522	SUB1	91	93.103	ENSCAFG00000024488	-	86	94.495	Canis_familiaris
ENSCLAG00000007522	SUB1	100	98.438	ENSCAFG00000016713	-	96	98.438	Canis_familiaris
ENSCLAG00000007522	SUB1	100	98.438	ENSCAFG00000018879	-	88	98.438	Canis_familiaris
ENSCLAG00000007522	SUB1	100	98.438	ENSCAFG00020016840	-	100	98.438	Canis_lupus_dingo
ENSCLAG00000007522	SUB1	100	96.899	ENSCAFG00020011479	-	77	96.899	Canis_lupus_dingo
ENSCLAG00000007522	SUB1	100	99.219	ENSCHIG00000008460	SUB1	100	99.219	Capra_hircus
ENSCLAG00000007522	SUB1	100	90.076	ENSTSYG00000014069	-	93	89.313	Carlito_syrichta
ENSCLAG00000007522	SUB1	100	99.219	ENSTSYG00000029948	-	100	99.219	Carlito_syrichta
ENSCLAG00000007522	SUB1	100	87.500	ENSTSYG00000035366	-	83	87.500	Carlito_syrichta
ENSCLAG00000007522	SUB1	100	99.219	ENSCPOG00000031334	SUB1	100	99.219	Cavia_porcellus
ENSCLAG00000007522	SUB1	100	92.188	ENSCCAG00000017043	-	93	92.188	Cebus_capucinus
ENSCLAG00000007522	SUB1	100	92.969	ENSCCAG00000020604	-	100	94.531	Cebus_capucinus
ENSCLAG00000007522	SUB1	100	99.219	ENSCCAG00000023605	-	100	99.219	Cebus_capucinus
ENSCLAG00000007522	SUB1	100	93.750	ENSCCAG00000033751	-	95	95.312	Cebus_capucinus
ENSCLAG00000007522	SUB1	100	99.219	ENSCATG00000031199	SUB1	100	99.219	Cercocebus_atys
ENSCLAG00000007522	SUB1	100	95.312	ENSCSAG00000019449	-	100	95.312	Chlorocebus_sabaeus
ENSCLAG00000007522	SUB1	100	99.219	ENSCSAG00000017172	-	100	99.219	Chlorocebus_sabaeus
ENSCLAG00000007522	SUB1	100	89.844	ENSCPBG00000024218	SUB1	79	86.719	Chrysemys_picta_bellii
ENSCLAG00000007522	SUB1	100	78.125	ENSCANG00000028665	-	90	78.125	Colobus_angolensis_palliatus
ENSCLAG00000007522	SUB1	100	99.219	ENSCANG00000029372	SUB1	100	99.219	Colobus_angolensis_palliatus
ENSCLAG00000007522	SUB1	100	78.125	ENSCGRG00001014660	-	100	78.125	Cricetulus_griseus_chok1gshd
ENSCLAG00000007522	SUB1	100	75.781	ENSCGRG00001016254	-	100	76.562	Cricetulus_griseus_chok1gshd
ENSCLAG00000007522	SUB1	100	92.188	ENSCGRG00001003473	-	100	93.750	Cricetulus_griseus_chok1gshd
ENSCLAG00000007522	SUB1	100	92.188	ENSCGRG00000001133	-	100	93.750	Cricetulus_griseus_crigri
ENSCLAG00000007522	SUB1	100	78.906	ENSCGRG00000001489	-	100	80.469	Cricetulus_griseus_crigri
ENSCLAG00000007522	SUB1	100	78.125	ENSCGRG00000019368	-	100	78.125	Cricetulus_griseus_crigri
ENSCLAG00000007522	SUB1	100	71.094	ENSDARG00000007720	sub1b	100	65.625	Danio_rerio
ENSCLAG00000007522	SUB1	99	75.591	ENSDARG00000053446	sub1a	100	74.219	Danio_rerio
ENSCLAG00000007522	SUB1	100	96.094	ENSDNOG00000040794	-	100	96.094	Dasypus_novemcinctus
ENSCLAG00000007522	SUB1	100	92.969	ENSDNOG00000032396	-	100	94.531	Dasypus_novemcinctus
ENSCLAG00000007522	SUB1	100	96.094	ENSDORG00000013916	Sub1	100	96.094	Dipodomys_ordii
ENSCLAG00000007522	SUB1	100	99.219	ENSEASG00005007099	SUB1	100	99.219	Equus_asinus_asinus
ENSCLAG00000007522	SUB1	100	99.219	ENSECAG00000012399	SUB1	100	99.219	Equus_caballus
ENSCLAG00000007522	SUB1	81	96.154	ENSEEUG00000000436	SUB1	100	96.154	Erinaceus_europaeus
ENSCLAG00000007522	SUB1	100	98.438	ENSFCAG00000037288	SUB1	100	98.438	Felis_catus
ENSCLAG00000007522	SUB1	100	88.281	ENSFALG00000002143	SUB1	87	88.281	Ficedula_albicollis
ENSCLAG00000007522	SUB1	100	99.219	ENSFDAG00000017179	SUB1	100	99.219	Fukomys_damarensis
ENSCLAG00000007522	SUB1	100	85.156	ENSGALG00000034905	-	100	82.812	Gallus_gallus
ENSCLAG00000007522	SUB1	100	52.344	ENSGALG00000027147	-	100	53.125	Gallus_gallus
ENSCLAG00000007522	SUB1	100	89.062	ENSGALG00000003248	SUB1	100	89.062	Gallus_gallus
ENSCLAG00000007522	SUB1	100	71.094	ENSGACG00000003912	sub1b	100	65.625	Gasterosteus_aculeatus
ENSCLAG00000007522	SUB1	100	89.844	ENSGAGG00000013535	SUB1	100	89.844	Gopherus_agassizii
ENSCLAG00000007522	SUB1	100	99.219	ENSGGOG00000040900	SUB1	100	99.219	Gorilla_gorilla
ENSCLAG00000007522	SUB1	82	71.429	ENSHBUG00000013953	sub1b	77	71.429	Haplochromis_burtoni
ENSCLAG00000007522	SUB1	100	99.219	ENSHGLG00000006749	SUB1	100	99.219	Heterocephalus_glaber_female
ENSCLAG00000007522	SUB1	100	99.219	ENSHGLG00100014344	SUB1	100	99.219	Heterocephalus_glaber_male
ENSCLAG00000007522	SUB1	100	70.312	ENSHCOG00000001809	sub1b	100	64.062	Hippocampus_comes
ENSCLAG00000007522	SUB1	100	70.312	ENSIPUG00000008166	sub1	100	66.406	Ictalurus_punctatus
ENSCLAG00000007522	SUB1	100	73.643	ENSIPUG00000024367	SUB1	100	68.992	Ictalurus_punctatus
ENSCLAG00000007522	SUB1	100	98.438	ENSSTOG00000019364	SUB1	100	98.438	Ictidomys_tridecemlineatus
ENSCLAG00000007522	SUB1	100	90.625	ENSJJAG00000018885	Sub1	100	90.625	Jaculus_jaculus
ENSCLAG00000007522	SUB1	99	70.079	ENSLBEG00000010728	sub1b	100	67.969	Labrus_bergylta
ENSCLAG00000007522	SUB1	51	90.769	ENSLACG00000001068	SUB1	100	90.769	Latimeria_chalumnae
ENSCLAG00000007522	SUB1	100	75.000	ENSLOCG00000006692	sub1b	100	71.875	Lepisosteus_oculatus
ENSCLAG00000007522	SUB1	100	97.656	ENSLAFG00000032088	-	100	97.656	Loxodonta_africana
ENSCLAG00000007522	SUB1	100	97.656	ENSLAFG00000011006	-	100	97.656	Loxodonta_africana
ENSCLAG00000007522	SUB1	100	99.219	ENSMFAG00000040728	SUB1	100	99.219	Macaca_fascicularis
ENSCLAG00000007522	SUB1	100	90.625	ENSMFAG00000045643	-	61	90.625	Macaca_fascicularis
ENSCLAG00000007522	SUB1	100	99.219	ENSMMUG00000046181	SUB1	100	99.219	Macaca_mulatta
ENSCLAG00000007522	SUB1	100	99.219	ENSMNEG00000037046	SUB1	100	99.219	Macaca_nemestrina
ENSCLAG00000007522	SUB1	100	99.219	ENSMLEG00000037017	-	100	99.219	Mandrillus_leucophaeus
ENSCLAG00000007522	SUB1	100	77.344	ENSMLEG00000043436	-	90	77.344	Mandrillus_leucophaeus
ENSCLAG00000007522	SUB1	100	96.875	ENSMLEG00000030509	-	94	96.875	Mandrillus_leucophaeus
ENSCLAG00000007522	SUB1	100	69.531	ENSMAMG00000018428	sub1b	100	65.625	Mastacembelus_armatus
ENSCLAG00000007522	SUB1	100	71.094	ENSMZEG00005021252	sub1b	100	67.188	Maylandia_zebra
ENSCLAG00000007522	SUB1	100	89.062	ENSMGAG00000002906	SUB1	100	89.062	Meleagris_gallopavo
ENSCLAG00000007522	SUB1	100	50.000	ENSMGAG00000001200	-	95	50.000	Meleagris_gallopavo
ENSCLAG00000007522	SUB1	100	92.188	ENSMAUG00000020232	Sub1	100	93.750	Mesocricetus_auratus
ENSCLAG00000007522	SUB1	100	99.219	ENSMICG00000014535	SUB1	100	99.219	Microcebus_murinus
ENSCLAG00000007522	SUB1	100	91.406	ENSMOCG00000018930	-	100	92.969	Microtus_ochrogaster
ENSCLAG00000007522	SUB1	100	80.469	ENSMOCG00000016424	-	100	80.469	Microtus_ochrogaster
ENSCLAG00000007522	SUB1	100	82.270	ENSMODG00000020410	SUB1	100	79.433	Monodelphis_domestica
ENSCLAG00000007522	SUB1	100	71.094	ENSMALG00000007163	sub1b	81	72.656	Monopterus_albus
ENSCLAG00000007522	SUB1	100	92.188	MGP_CAROLIEiJ_G0019676	Sub1	100	93.750	Mus_caroli
ENSCLAG00000007522	SUB1	100	91.406	ENSMUSG00000022205	Sub1	100	92.969	Mus_musculus
ENSCLAG00000007522	SUB1	100	91.406	MGP_PahariEiJ_G0016056	Sub1	100	92.969	Mus_pahari
ENSCLAG00000007522	SUB1	100	91.406	MGP_SPRETEiJ_G0020573	Sub1	100	92.969	Mus_spretus
ENSCLAG00000007522	SUB1	100	97.656	ENSMPUG00000018418	-	100	97.656	Mustela_putorius_furo
ENSCLAG00000007522	SUB1	100	98.438	ENSMPUG00000015185	-	100	98.438	Mustela_putorius_furo
ENSCLAG00000007522	SUB1	100	92.188	ENSMLUG00000009236	-	95	92.188	Myotis_lucifugus
ENSCLAG00000007522	SUB1	100	97.656	ENSMLUG00000013685	-	95	97.656	Myotis_lucifugus
ENSCLAG00000007522	SUB1	100	89.844	ENSNGAG00000010782	-	84	91.406	Nannospalax_galili
ENSCLAG00000007522	SUB1	100	81.250	ENSNGAG00000017212	-	100	81.250	Nannospalax_galili
ENSCLAG00000007522	SUB1	100	92.969	ENSNGAG00000014072	-	100	94.531	Nannospalax_galili
ENSCLAG00000007522	SUB1	82	70.476	ENSNBRG00000008451	sub1b	84	70.476	Neolamprologus_brichardi
ENSCLAG00000007522	SUB1	100	98.438	ENSNLEG00000018383	-	95	98.438	Nomascus_leucogenys
ENSCLAG00000007522	SUB1	100	98.438	ENSNLEG00000036068	SUB1	100	98.438	Nomascus_leucogenys
ENSCLAG00000007522	SUB1	100	92.969	ENSNLEG00000035968	-	100	92.969	Nomascus_leucogenys
ENSCLAG00000007522	SUB1	100	89.844	ENSMEUG00000007770	SUB1	100	86.719	Notamacropus_eugenii
ENSCLAG00000007522	SUB1	100	96.094	ENSOPRG00000012887	SUB1	100	96.094	Ochotona_princeps
ENSCLAG00000007522	SUB1	100	99.219	ENSODEG00000001937	-	100	99.219	Octodon_degus
ENSCLAG00000007522	SUB1	100	90.625	ENSODEG00000014558	-	84	90.625	Octodon_degus
ENSCLAG00000007522	SUB1	96	95.935	ENSODEG00000015114	-	98	95.935	Octodon_degus
ENSCLAG00000007522	SUB1	100	90.625	ENSOANG00000002328	SUB1	95	90.625	Ornithorhynchus_anatinus
ENSCLAG00000007522	SUB1	100	96.094	ENSOCUG00000006262	SUB1	60	96.094	Oryctolagus_cuniculus
ENSCLAG00000007522	SUB1	100	99.219	ENSOGAG00000009012	-	100	99.219	Otolemur_garnettii
ENSCLAG00000007522	SUB1	98	98.400	ENSOGAG00000000337	-	100	98.400	Otolemur_garnettii
ENSCLAG00000007522	SUB1	100	99.219	ENSOARG00000012154	SUB1	100	99.219	Ovis_aries
ENSCLAG00000007522	SUB1	100	99.219	ENSPPAG00000011212	SUB1	100	99.219	Pan_paniscus
ENSCLAG00000007522	SUB1	100	98.438	ENSPPRG00000008557	SUB1	100	98.438	Panthera_pardus
ENSCLAG00000007522	SUB1	100	98.438	ENSPTIG00000009466	SUB1	100	98.438	Panthera_tigris_altaica
ENSCLAG00000007522	SUB1	100	99.219	ENSPTRG00000048895	SUB1	100	99.219	Pan_troglodytes
ENSCLAG00000007522	SUB1	100	91.406	ENSPTRG00000041644	-	100	92.969	Pan_troglodytes
ENSCLAG00000007522	SUB1	100	99.219	ENSPANG00000000339	-	97	99.219	Papio_anubis
ENSCLAG00000007522	SUB1	100	92.969	ENSPANG00000035601	-	100	92.969	Papio_anubis
ENSCLAG00000007522	SUB1	100	76.562	ENSPANG00000033272	-	90	76.562	Papio_anubis
ENSCLAG00000007522	SUB1	100	96.875	ENSPANG00000000672	-	91	96.875	Papio_anubis
ENSCLAG00000007522	SUB1	100	99.219	ENSPANG00000002644	-	95	99.219	Papio_anubis
ENSCLAG00000007522	SUB1	100	75.000	ENSPKIG00000016923	sub1b	100	67.969	Paramormyrops_kingsleyae
ENSCLAG00000007522	SUB1	100	90.625	ENSPSIG00000005731	SUB1	95	87.500	Pelodiscus_sinensis
ENSCLAG00000007522	SUB1	100	80.469	ENSPCIG00000020827	-	100	80.469	Phascolarctos_cinereus
ENSCLAG00000007522	SUB1	100	89.844	ENSPCIG00000020907	-	100	86.719	Phascolarctos_cinereus
ENSCLAG00000007522	SUB1	100	99.219	ENSPPYG00000015379	SUB1	100	99.219	Pongo_abelii
ENSCLAG00000007522	SUB1	100	92.188	ENSPPYG00000018347	-	100	93.750	Pongo_abelii
ENSCLAG00000007522	SUB1	100	99.219	ENSPCOG00000014391	SUB1	100	99.219	Propithecus_coquereli
ENSCLAG00000007522	SUB1	100	98.438	ENSPVAG00000004785	SUB1	100	98.438	Pteropus_vampyrus
ENSCLAG00000007522	SUB1	100	71.094	ENSPNYG00000010975	sub1b	100	67.188	Pundamilia_nyererei
ENSCLAG00000007522	SUB1	99	75.591	ENSPNAG00000005998	sub1b	99	72.441	Pygocentrus_nattereri
ENSCLAG00000007522	SUB1	100	67.969	ENSPNAG00000008693	sub1a	100	70.312	Pygocentrus_nattereri
ENSCLAG00000007522	SUB1	100	91.406	ENSRNOG00000050563	Sub1	100	92.969	Rattus_norvegicus
ENSCLAG00000007522	SUB1	100	90.625	ENSRBIG00000031233	SUB1	100	92.188	Rhinopithecus_bieti
ENSCLAG00000007522	SUB1	100	99.219	ENSRROG00000040438	SUB1	100	99.219	Rhinopithecus_roxellana
ENSCLAG00000007522	SUB1	100	85.938	ENSRROG00000042718	-	90	85.938	Rhinopithecus_roxellana
ENSCLAG00000007522	SUB1	100	99.219	ENSSBOG00000026994	SUB1	100	99.219	Saimiri_boliviensis_boliviensis
ENSCLAG00000007522	SUB1	100	89.844	ENSSHAG00000014986	SUB1	100	86.719	Sarcophilus_harrisii
ENSCLAG00000007522	SUB1	100	74.219	ENSSFOG00015017283	sub1b	100	68.750	Scleropages_formosus
ENSCLAG00000007522	SUB1	100	73.438	ENSSFOG00015018386	sub1b	100	75.000	Scleropages_formosus
ENSCLAG00000007522	SUB1	100	71.875	ENSSMAG00000000313	sub1b	100	65.625	Scophthalmus_maximus
ENSCLAG00000007522	SUB1	100	72.656	ENSSDUG00000013854	sub1b	76	71.875	Seriola_dumerili
ENSCLAG00000007522	SUB1	100	72.656	ENSSLDG00000000852	sub1b	100	66.406	Seriola_lalandi_dorsalis
ENSCLAG00000007522	SUB1	100	89.062	ENSSPUG00000016817	SUB1	100	89.062	Sphenodon_punctatus
ENSCLAG00000007522	SUB1	100	72.656	ENSSPAG00000019363	sub1b	100	66.406	Stegastes_partitus
ENSCLAG00000007522	SUB1	100	99.219	ENSSSCG00000040294	-	87	99.219	Sus_scrofa
ENSCLAG00000007522	SUB1	100	99.219	ENSSSCG00000032650	-	100	99.219	Sus_scrofa
ENSCLAG00000007522	SUB1	100	86.719	ENSTGUG00000001918	SUB1	100	86.719	Taeniopygia_guttata
ENSCLAG00000007522	SUB1	100	69.531	ENSTRUG00000024420	sub1b	100	65.625	Takifugu_rubripes
ENSCLAG00000007522	SUB1	100	66.406	ENSTNIG00000002700	sub1b	100	65.625	Tetraodon_nigroviridis
ENSCLAG00000007522	SUB1	100	92.188	ENSTBEG00000001790	-	100	93.750	Tupaia_belangeri
ENSCLAG00000007522	SUB1	100	92.188	ENSTBEG00000012861	-	100	93.750	Tupaia_belangeri
ENSCLAG00000007522	SUB1	100	91.406	ENSTBEG00000011247	-	99	92.969	Tupaia_belangeri
ENSCLAG00000007522	SUB1	100	97.656	ENSTBEG00000004053	-	100	97.656	Tupaia_belangeri
ENSCLAG00000007522	SUB1	99	88.976	ENSTBEG00000015821	-	100	90.551	Tupaia_belangeri
ENSCLAG00000007522	SUB1	100	97.656	ENSTBEG00000006504	-	100	97.656	Tupaia_belangeri
ENSCLAG00000007522	SUB1	81	99.038	ENSTTRG00000017324	SUB1	100	99.038	Tursiops_truncatus
ENSCLAG00000007522	SUB1	100	98.438	ENSUAMG00000000182	SUB1	100	98.438	Ursus_americanus
ENSCLAG00000007522	SUB1	100	98.438	ENSUMAG00000013792	SUB1	100	98.438	Ursus_maritimus
ENSCLAG00000007522	SUB1	100	88.281	ENSVPAG00000011012	SUB1	100	89.844	Vicugna_pacos
ENSCLAG00000007522	SUB1	89	91.228	ENSVVUG00000025193	-	92	93.694	Vulpes_vulpes
ENSCLAG00000007522	SUB1	100	98.438	ENSVVUG00000022166	-	100	98.438	Vulpes_vulpes
ENSCLAG00000007522	SUB1	100	80.000	ENSXETG00000027218	sub1	100	77.692	Xenopus_tropicalis