EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000007568 (Gene tree)
Gene ID: 102010646
Gene Symbol: SRRT
Alias: ARS2|Asr2|serrate
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 13950 bases
Position: chrJH722033.1:87084-101033
Accession: 102010646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000010969	ARS2	PF04959.13	8.1e-91	1	1
ENSCLAP00000010967	ARS2	PF04959.13	1.3e-90	1	1
ENSCLAP00000010968	ARS2	PF04959.13	2.3e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000011103	SRRT-202	2574	-	ENSCLAP00000010968	857 (aa)	-	-
ENSCLAT00000011102	SRRT-201	2649	XM_005413680	ENSCLAP00000010967	876 (aa)	XP_005413737	-
ENSCLAT00000011104	SRRT-203	1527	-	ENSCLAP00000010969	508 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000007568's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000007568's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000007568	SRRT	100	98.858	ENSG00000087087	SRRT	99	100.000	Homo_sapiens
ENSCLAG00000007568	SRRT	89	72.163	ENSAPOG00000002304	srrt	96	63.882	Acanthochromis_polyacanthus
ENSCLAG00000007568	SRRT	100	93.916	ENSAMEG00000014506	SRRT	100	93.916	Ailuropoda_melanoleuca
ENSCLAG00000007568	SRRT	89	71.949	ENSACIG00000015795	srrt	85	75.484	Amphilophus_citrinellus
ENSCLAG00000007568	SRRT	93	58.621	ENSAOCG00000009189	-	96	55.594	Amphiprion_ocellaris
ENSCLAG00000007568	SRRT	89	72.377	ENSAOCG00000009693	srrt	96	65.901	Amphiprion_ocellaris
ENSCLAG00000007568	SRRT	89	71.949	ENSAPEG00000003646	srrt	95	65.815	Amphiprion_percula
ENSCLAG00000007568	SRRT	93	58.621	ENSAPEG00000020016	-	96	55.594	Amphiprion_percula
ENSCLAG00000007568	SRRT	95	64.670	ENSATEG00000014425	srrt	96	65.207	Anabas_testudineus
ENSCLAG00000007568	SRRT	94	57.285	ENSATEG00000003652	-	85	64.092	Anabas_testudineus
ENSCLAG00000007568	SRRT	95	76.896	ENSACAG00000001014	SRRT	96	77.005	Anolis_carolinensis
ENSCLAG00000007568	SRRT	100	98.059	ENSANAG00000031718	SRRT	100	98.059	Aotus_nancymaae
ENSCLAG00000007568	SRRT	94	57.344	ENSACLG00000009423	-	96	53.846	Astatotilapia_calliptera
ENSCLAG00000007568	SRRT	89	70.664	ENSACLG00000013156	srrt	50	74.194	Astatotilapia_calliptera
ENSCLAG00000007568	SRRT	88	71.367	ENSAMXG00000016671	srrt	93	65.023	Astyanax_mexicanus
ENSCLAG00000007568	SRRT	100	97.146	ENSBTAG00000001134	SRRT	100	97.146	Bos_taurus
ENSCLAG00000007568	SRRT	76	42.080	WBGene00017085	E01A2.2	85	42.505	Caenorhabditis_elegans
ENSCLAG00000007568	SRRT	100	97.831	ENSCJAG00000014917	SRRT	100	97.831	Callithrix_jacchus
ENSCLAG00000007568	SRRT	100	98.174	ENSCAFG00000023538	SRRT	100	98.174	Canis_familiaris
ENSCLAG00000007568	SRRT	100	97.603	ENSCAFG00020013358	SRRT	100	97.603	Canis_lupus_dingo
ENSCLAG00000007568	SRRT	100	97.260	ENSCHIG00000010495	SRRT	100	97.260	Capra_hircus
ENSCLAG00000007568	SRRT	100	93.858	ENSTSYG00000036426	SRRT	99	94.258	Carlito_syrichta
ENSCLAG00000007568	SRRT	100	94.264	ENSCAPG00000013586	SRRT	100	97.126	Cavia_aperea
ENSCLAG00000007568	SRRT	100	99.088	ENSCPOG00000001739	SRRT	100	99.088	Cavia_porcellus
ENSCLAG00000007568	SRRT	100	98.288	ENSCCAG00000015877	SRRT	100	98.288	Cebus_capucinus
ENSCLAG00000007568	SRRT	100	98.288	ENSCATG00000036306	SRRT	100	98.288	Cercocebus_atys
ENSCLAG00000007568	SRRT	100	98.630	ENSCSAG00000017996	SRRT	100	98.630	Chlorocebus_sabaeus
ENSCLAG00000007568	SRRT	57	93.491	ENSCHOG00000007815	SRRT	67	93.491	Choloepus_hoffmanni
ENSCLAG00000007568	SRRT	76	82.308	ENSCPBG00000011553	SRRT	83	82.264	Chrysemys_picta_bellii
ENSCLAG00000007568	SRRT	97	46.792	ENSCING00000003506	-	54	52.075	Ciona_intestinalis
ENSCLAG00000007568	SRRT	99	43.831	ENSCSAVG00000008394	-	81	54.039	Ciona_savignyi
ENSCLAG00000007568	SRRT	100	97.945	ENSCANG00000034556	SRRT	100	97.945	Colobus_angolensis_palliatus
ENSCLAG00000007568	SRRT	100	97.039	ENSCGRG00001001594	Srrt	100	97.039	Cricetulus_griseus_chok1gshd
ENSCLAG00000007568	SRRT	100	96.311	ENSCGRG00000007292	Srrt	100	96.311	Cricetulus_griseus_crigri
ENSCLAG00000007568	SRRT	89	68.132	ENSCSEG00000017878	srrt	96	59.681	Cynoglossus_semilaevis
ENSCLAG00000007568	SRRT	94	57.692	ENSCSEG00000005233	-	96	52.588	Cynoglossus_semilaevis
ENSCLAG00000007568	SRRT	95	65.301	ENSCVAG00000019848	srrt	96	64.804	Cyprinodon_variegatus
ENSCLAG00000007568	SRRT	90	54.684	ENSCVAG00000017344	-	95	54.512	Cyprinodon_variegatus
ENSCLAG00000007568	SRRT	89	72.163	ENSDARG00000017762	srrt	96	64.886	Danio_rerio
ENSCLAG00000007568	SRRT	100	98.059	ENSDNOG00000003851	SRRT	100	98.059	Dasypus_novemcinctus
ENSCLAG00000007568	SRRT	100	95.904	ENSDORG00000005584	Srrt	100	95.904	Dipodomys_ordii
ENSCLAG00000007568	SRRT	89	49.896	FBgn0033062	Ars2	67	53.277	Drosophila_melanogaster
ENSCLAG00000007568	SRRT	100	91.461	ENSETEG00000016175	SRRT	82	94.211	Echinops_telfairi
ENSCLAG00000007568	SRRT	89	59.227	ENSEBUG00000008517	-	76	63.889	Eptatretus_burgeri
ENSCLAG00000007568	SRRT	100	97.945	ENSEASG00005016956	SRRT	100	97.945	Equus_asinus_asinus
ENSCLAG00000007568	SRRT	100	98.059	ENSECAG00000012292	SRRT	100	98.059	Equus_caballus
ENSCLAG00000007568	SRRT	92	95.732	ENSEEUG00000009117	SRRT	93	95.732	Erinaceus_europaeus
ENSCLAG00000007568	SRRT	95	64.892	ENSELUG00000006651	srrt	50	71.338	Esox_lucius
ENSCLAG00000007568	SRRT	89	60.041	ENSELUG00000021216	-	53	64.449	Esox_lucius
ENSCLAG00000007568	SRRT	100	98.288	ENSFCAG00000006855	SRRT	100	98.288	Felis_catus
ENSCLAG00000007568	SRRT	58	53.205	ENSFALG00000007524	-	79	75.342	Ficedula_albicollis
ENSCLAG00000007568	SRRT	100	94.406	ENSFDAG00000021347	SRRT	100	94.406	Fukomys_damarensis
ENSCLAG00000007568	SRRT	93	55.509	ENSFHEG00000004105	-	93	56.494	Fundulus_heteroclitus
ENSCLAG00000007568	SRRT	82	73.508	ENSFHEG00000002756	srrt	89	74.163	Fundulus_heteroclitus
ENSCLAG00000007568	SRRT	95	60.414	ENSGMOG00000018619	srrt	96	60.367	Gadus_morhua
ENSCLAG00000007568	SRRT	86	58.333	ENSGMOG00000018694	-	83	54.459	Gadus_morhua
ENSCLAG00000007568	SRRT	93	53.480	ENSGAFG00000020383	-	96	54.459	Gambusia_affinis
ENSCLAG00000007568	SRRT	89	70.878	ENSGAFG00000005423	srrt	96	62.037	Gambusia_affinis
ENSCLAG00000007568	SRRT	93	69.014	ENSGACG00000020387	srrt	51	74.359	Gasterosteus_aculeatus
ENSCLAG00000007568	SRRT	94	55.311	ENSGACG00000001100	-	82	60.334	Gasterosteus_aculeatus
ENSCLAG00000007568	SRRT	100	98.858	ENSGGOG00000001508	SRRT	99	98.858	Gorilla_gorilla
ENSCLAG00000007568	SRRT	89	70.878	ENSHBUG00000002942	srrt	50	74.409	Haplochromis_burtoni
ENSCLAG00000007568	SRRT	100	98.292	ENSHGLG00000008344	Srrt	100	98.292	Heterocephalus_glaber_female
ENSCLAG00000007568	SRRT	100	98.402	ENSHGLG00100018857	Srrt	100	98.402	Heterocephalus_glaber_male
ENSCLAG00000007568	SRRT	98	63.507	ENSHCOG00000005403	srrt	96	63.012	Hippocampus_comes
ENSCLAG00000007568	SRRT	90	57.294	ENSHCOG00000008904	-	95	52.842	Hippocampus_comes
ENSCLAG00000007568	SRRT	54	75.427	ENSIPUG00000021150	srrt	80	75.693	Ictalurus_punctatus
ENSCLAG00000007568	SRRT	100	98.059	ENSSTOG00000013776	SRRT	100	98.059	Ictidomys_tridecemlineatus
ENSCLAG00000007568	SRRT	100	95.662	ENSJJAG00000010446	Srrt	100	95.662	Jaculus_jaculus
ENSCLAG00000007568	SRRT	94	55.969	ENSKMAG00000008468	-	96	53.281	Kryptolebias_marmoratus
ENSCLAG00000007568	SRRT	94	68.507	ENSKMAG00000013599	srrt	96	64.897	Kryptolebias_marmoratus
ENSCLAG00000007568	SRRT	96	65.704	ENSLBEG00000016308	srrt	96	64.789	Labrus_bergylta
ENSCLAG00000007568	SRRT	59	62.951	ENSLBEG00000028983	-	75	64.685	Labrus_bergylta
ENSCLAG00000007568	SRRT	95	64.090	ENSLACG00000001089	SRRT	96	64.941	Latimeria_chalumnae
ENSCLAG00000007568	SRRT	89	66.004	ENSLOCG00000013658	srrt	83	68.376	Lepisosteus_oculatus
ENSCLAG00000007568	SRRT	100	97.831	ENSLAFG00000007725	SRRT	100	97.831	Loxodonta_africana
ENSCLAG00000007568	SRRT	100	98.059	ENSMFAG00000033745	SRRT	100	98.059	Macaca_fascicularis
ENSCLAG00000007568	SRRT	100	98.630	ENSMMUG00000021255	SRRT	100	98.630	Macaca_mulatta
ENSCLAG00000007568	SRRT	100	98.630	ENSMNEG00000041864	SRRT	100	98.630	Macaca_nemestrina
ENSCLAG00000007568	SRRT	100	98.059	ENSMLEG00000029479	SRRT	100	98.059	Mandrillus_leucophaeus
ENSCLAG00000007568	SRRT	89	69.807	ENSMAMG00000014311	srrt	96	63.711	Mastacembelus_armatus
ENSCLAG00000007568	SRRT	94	57.344	ENSMAMG00000010681	-	96	55.196	Mastacembelus_armatus
ENSCLAG00000007568	SRRT	89	70.664	ENSMZEG00005016135	srrt	92	63.551	Maylandia_zebra
ENSCLAG00000007568	SRRT	94	57.344	ENSMZEG00005028002	-	52	63.636	Maylandia_zebra
ENSCLAG00000007568	SRRT	100	96.461	ENSMAUG00000011386	Srrt	100	96.461	Mesocricetus_auratus
ENSCLAG00000007568	SRRT	100	98.174	ENSMICG00000009471	SRRT	100	98.174	Microcebus_murinus
ENSCLAG00000007568	SRRT	100	97.032	ENSMOCG00000001971	Srrt	100	97.032	Microtus_ochrogaster
ENSCLAG00000007568	SRRT	89	61.653	ENSMMOG00000011137	-	55	65.885	Mola_mola
ENSCLAG00000007568	SRRT	99	65.392	ENSMMOG00000016399	srrt	96	65.125	Mola_mola
ENSCLAG00000007568	SRRT	90	84.244	ENSMODG00000004862	SRRT	90	90.437	Monodelphis_domestica
ENSCLAG00000007568	SRRT	89	67.238	ENSMALG00000018604	srrt	80	71.183	Monopterus_albus
ENSCLAG00000007568	SRRT	99	49.216	ENSMALG00000005567	-	84	52.609	Monopterus_albus
ENSCLAG00000007568	SRRT	100	96.918	MGP_CAROLIEiJ_G0027870	Srrt	100	97.059	Mus_caroli
ENSCLAG00000007568	SRRT	100	96.918	ENSMUSG00000037364	Srrt	100	96.918	Mus_musculus
ENSCLAG00000007568	SRRT	100	97.146	MGP_PahariEiJ_G0024456	Srrt	100	97.426	Mus_pahari
ENSCLAG00000007568	SRRT	100	96.918	MGP_SPRETEiJ_G0028875	Srrt	100	97.059	Mus_spretus
ENSCLAG00000007568	SRRT	100	98.174	ENSMPUG00000015839	SRRT	100	98.174	Mustela_putorius_furo
ENSCLAG00000007568	SRRT	100	97.603	ENSMLUG00000009975	SRRT	100	97.603	Myotis_lucifugus
ENSCLAG00000007568	SRRT	100	97.374	ENSNGAG00000023715	Srrt	100	97.374	Nannospalax_galili
ENSCLAG00000007568	SRRT	89	69.742	ENSNBRG00000019100	srrt	52	72.688	Neolamprologus_brichardi
ENSCLAG00000007568	SRRT	95	87.966	ENSNLEG00000011987	SRRT	99	86.861	Nomascus_leucogenys
ENSCLAG00000007568	SRRT	98	74.130	ENSMEUG00000011941	SRRT	98	73.782	Notamacropus_eugenii
ENSCLAG00000007568	SRRT	82	87.560	ENSOPRG00000002502	-	67	100.000	Ochotona_princeps
ENSCLAG00000007568	SRRT	100	97.831	ENSODEG00000016856	SRRT	100	97.831	Octodon_degus
ENSCLAG00000007568	SRRT	89	71.092	ENSONIG00000004242	srrt	52	74.409	Oreochromis_niloticus
ENSCLAG00000007568	SRRT	94	57.430	ENSONIG00000016080	-	95	53.864	Oreochromis_niloticus
ENSCLAG00000007568	SRRT	95	67.807	ENSORLG00000008120	srrt	52	73.763	Oryzias_latipes
ENSCLAG00000007568	SRRT	94	67.611	ENSORLG00020003058	srrt	52	73.548	Oryzias_latipes_hni
ENSCLAG00000007568	SRRT	95	67.606	ENSORLG00015008062	srrt	96	62.341	Oryzias_latipes_hsok
ENSCLAG00000007568	SRRT	93	56.204	ENSOMEG00000006963	-	96	55.714	Oryzias_melastigma
ENSCLAG00000007568	SRRT	96	65.978	ENSOMEG00000003155	srrt	96	64.933	Oryzias_melastigma
ENSCLAG00000007568	SRRT	100	98.516	ENSOGAG00000017242	SRRT	100	98.516	Otolemur_garnettii
ENSCLAG00000007568	SRRT	100	96.689	ENSOARG00000015645	SRRT	100	96.689	Ovis_aries
ENSCLAG00000007568	SRRT	100	98.174	ENSPPAG00000041090	SRRT	100	98.174	Pan_paniscus
ENSCLAG00000007568	SRRT	100	97.374	ENSPPRG00000009557	SRRT	100	97.374	Panthera_pardus
ENSCLAG00000007568	SRRT	100	98.174	ENSPTIG00000014355	SRRT	100	98.174	Panthera_tigris_altaica
ENSCLAG00000007568	SRRT	100	98.174	ENSPTRG00000019511	SRRT	100	98.174	Pan_troglodytes
ENSCLAG00000007568	SRRT	100	94.118	ENSPANG00000020763	SRRT	98	96.163	Papio_anubis
ENSCLAG00000007568	SRRT	94	67.464	ENSPKIG00000022212	-	96	65.135	Paramormyrops_kingsleyae
ENSCLAG00000007568	SRRT	96	71.000	ENSPKIG00000005434	srrt	96	68.839	Paramormyrops_kingsleyae
ENSCLAG00000007568	SRRT	100	78.368	ENSPSIG00000016311	SRRT	96	80.756	Pelodiscus_sinensis
ENSCLAG00000007568	SRRT	89	71.092	ENSPMGG00000002841	srrt	96	64.855	Periophthalmus_magnuspinnatus
ENSCLAG00000007568	SRRT	100	96.063	ENSPEMG00000010834	Srrt	100	96.063	Peromyscus_maniculatus_bairdii
ENSCLAG00000007568	SRRT	99	58.286	ENSPMAG00000009614	-	55	64.496	Petromyzon_marinus
ENSCLAG00000007568	SRRT	98	91.763	ENSPCIG00000000816	SRRT	98	91.763	Phascolarctos_cinereus
ENSCLAG00000007568	SRRT	89	70.940	ENSPFOG00000005704	srrt	96	63.615	Poecilia_formosa
ENSCLAG00000007568	SRRT	93	52.984	ENSPFOG00000016554	-	96	53.538	Poecilia_formosa
ENSCLAG00000007568	SRRT	89	70.664	ENSPLAG00000021992	srrt	51	74.194	Poecilia_latipinna
ENSCLAG00000007568	SRRT	93	52.920	ENSPLAG00000004526	-	96	53.673	Poecilia_latipinna
ENSCLAG00000007568	SRRT	89	70.513	ENSPMEG00000001182	srrt	96	63.488	Poecilia_mexicana
ENSCLAG00000007568	SRRT	90	52.136	ENSPMEG00000001520	-	95	52.734	Poecilia_mexicana
ENSCLAG00000007568	SRRT	89	70.940	ENSPREG00000022308	srrt	96	63.731	Poecilia_reticulata
ENSCLAG00000007568	SRRT	100	88.584	ENSPPYG00000017432	SRRT	100	88.584	Pongo_abelii
ENSCLAG00000007568	SRRT	100	93.665	ENSPCAG00000001621	SRRT	100	93.665	Procavia_capensis
ENSCLAG00000007568	SRRT	100	98.402	ENSPCOG00000025751	SRRT	100	98.402	Propithecus_coquereli
ENSCLAG00000007568	SRRT	100	89.060	ENSPVAG00000000834	SRRT	100	90.294	Pteropus_vampyrus
ENSCLAG00000007568	SRRT	89	70.664	ENSPNYG00000018710	srrt	52	74.194	Pundamilia_nyererei
ENSCLAG00000007568	SRRT	80	72.086	ENSPNAG00000010629	srrt	95	51.471	Pygocentrus_nattereri
ENSCLAG00000007568	SRRT	91	85.714	ENSRNOG00000048277	AABR07035787.1	93	85.714	Rattus_norvegicus
ENSCLAG00000007568	SRRT	100	98.630	ENSRBIG00000035718	SRRT	100	98.630	Rhinopithecus_bieti
ENSCLAG00000007568	SRRT	100	98.630	ENSRROG00000030622	SRRT	100	98.630	Rhinopithecus_roxellana
ENSCLAG00000007568	SRRT	100	98.288	ENSSBOG00000033570	SRRT	100	98.288	Saimiri_boliviensis_boliviensis
ENSCLAG00000007568	SRRT	100	86.389	ENSSHAG00000007349	-	100	88.050	Sarcophilus_harrisii
ENSCLAG00000007568	SRRT	90	74.468	ENSSFOG00015017293	srrt	51	79.274	Scleropages_formosus
ENSCLAG00000007568	SRRT	89	57.353	ENSSMAG00000018195	-	87	61.587	Scophthalmus_maximus
ENSCLAG00000007568	SRRT	95	64.848	ENSSMAG00000015342	srrt	96	64.819	Scophthalmus_maximus
ENSCLAG00000007568	SRRT	89	70.878	ENSSDUG00000012049	srrt	96	65.047	Seriola_dumerili
ENSCLAG00000007568	SRRT	92	53.157	ENSSDUG00000002051	-	93	54.622	Seriola_dumerili
ENSCLAG00000007568	SRRT	95	65.286	ENSSLDG00000017477	srrt	81	75.054	Seriola_lalandi_dorsalis
ENSCLAG00000007568	SRRT	89	55.054	ENSSPAG00000018943	-	93	56.930	Stegastes_partitus
ENSCLAG00000007568	SRRT	89	71.064	ENSSPAG00000005665	srrt	94	63.805	Stegastes_partitus
ENSCLAG00000007568	SRRT	95	94.465	ENSSSCG00000024789	SRRT	99	94.404	Sus_scrofa
ENSCLAG00000007568	SRRT	90	54.375	ENSTRUG00000000023	-	94	53.293	Takifugu_rubripes
ENSCLAG00000007568	SRRT	96	63.944	ENSTRUG00000016075	srrt	96	63.636	Takifugu_rubripes
ENSCLAG00000007568	SRRT	89	69.767	ENSTNIG00000011779	srrt	100	61.087	Tetraodon_nigroviridis
ENSCLAG00000007568	SRRT	63	57.692	ENSTNIG00000019765	-	95	64.038	Tetraodon_nigroviridis
ENSCLAG00000007568	SRRT	93	56.137	ENSTNIG00000003111	-	96	52.729	Tetraodon_nigroviridis
ENSCLAG00000007568	SRRT	80	91.328	ENSTBEG00000005212	SRRT	66	96.382	Tupaia_belangeri
ENSCLAG00000007568	SRRT	100	97.603	ENSTTRG00000011104	SRRT	100	97.603	Tursiops_truncatus
ENSCLAG00000007568	SRRT	100	94.242	ENSUAMG00000027997	SRRT	98	98.325	Ursus_americanus
ENSCLAG00000007568	SRRT	100	98.402	ENSUMAG00000011295	SRRT	100	98.402	Ursus_maritimus
ENSCLAG00000007568	SRRT	100	98.174	ENSVVUG00000023572	SRRT	100	98.174	Vulpes_vulpes
ENSCLAG00000007568	SRRT	89	71.186	ENSXETG00000025124	srrt	84	76.129	Xenopus_tropicalis
ENSCLAG00000007568	SRRT	89	51.860	ENSXCOG00000013105	-	90	52.079	Xiphophorus_couchianus
ENSCLAG00000007568	SRRT	93	53.415	ENSXMAG00000002090	-	96	53.974	Xiphophorus_maculatus
ENSCLAG00000007568	SRRT	89	71.306	ENSXMAG00000007627	srrt	96	65.693	Xiphophorus_maculatus