EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000007662 (Gene tree)
Gene ID: 102004033
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 136342 bases
Position: chrJH721912.1:9487725-9624066
Accession: 102004033
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000011097	PUF	PF00806.19	1.6e-70	1	8
ENSCLAP00000011097	PUF	PF00806.19	1.6e-70	2	8
ENSCLAP00000011097	PUF	PF00806.19	1.6e-70	3	8
ENSCLAP00000011097	PUF	PF00806.19	1.6e-70	4	8
ENSCLAP00000011097	PUF	PF00806.19	1.6e-70	5	8
ENSCLAP00000011097	PUF	PF00806.19	1.6e-70	6	8
ENSCLAP00000011097	PUF	PF00806.19	1.6e-70	7	8
ENSCLAP00000011097	PUF	PF00806.19	1.6e-70	8	8
ENSCLAP00000011098	PUF	PF00806.19	6.5e-70	1	8
ENSCLAP00000011098	PUF	PF00806.19	6.5e-70	2	8
ENSCLAP00000011098	PUF	PF00806.19	6.5e-70	3	8
ENSCLAP00000011098	PUF	PF00806.19	6.5e-70	4	8
ENSCLAP00000011098	PUF	PF00806.19	6.5e-70	5	8
ENSCLAP00000011098	PUF	PF00806.19	6.5e-70	6	8
ENSCLAP00000011098	PUF	PF00806.19	6.5e-70	7	8
ENSCLAP00000011098	PUF	PF00806.19	6.5e-70	8	8
ENSCLAP00000011096	PUF	PF00806.19	1.4e-69	1	8
ENSCLAP00000011096	PUF	PF00806.19	1.4e-69	2	8
ENSCLAP00000011096	PUF	PF00806.19	1.4e-69	3	8
ENSCLAP00000011096	PUF	PF00806.19	1.4e-69	4	8
ENSCLAP00000011096	PUF	PF00806.19	1.4e-69	5	8
ENSCLAP00000011096	PUF	PF00806.19	1.4e-69	6	8
ENSCLAP00000011096	PUF	PF00806.19	1.4e-69	7	8
ENSCLAP00000011096	PUF	PF00806.19	1.4e-69	8	8
ENSCLAP00000011099	PUF	PF00806.19	2.9e-69	1	8
ENSCLAP00000011099	PUF	PF00806.19	2.9e-69	2	8
ENSCLAP00000011099	PUF	PF00806.19	2.9e-69	3	8
ENSCLAP00000011099	PUF	PF00806.19	2.9e-69	4	8
ENSCLAP00000011099	PUF	PF00806.19	2.9e-69	5	8
ENSCLAP00000011099	PUF	PF00806.19	2.9e-69	6	8
ENSCLAP00000011099	PUF	PF00806.19	2.9e-69	7	8
ENSCLAP00000011099	PUF	PF00806.19	2.9e-69	8	8
ENSCLAP00000011095	PUF	PF00806.19	3e-69	1	8
ENSCLAP00000011095	PUF	PF00806.19	3e-69	2	8
ENSCLAP00000011095	PUF	PF00806.19	3e-69	3	8
ENSCLAP00000011095	PUF	PF00806.19	3e-69	4	8
ENSCLAP00000011095	PUF	PF00806.19	3e-69	5	8
ENSCLAP00000011095	PUF	PF00806.19	3e-69	6	8
ENSCLAP00000011095	PUF	PF00806.19	3e-69	7	8
ENSCLAP00000011095	PUF	PF00806.19	3e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000011234	PUM1-205	3564	-	ENSCLAP00000011099	1187 (aa)	-	-
ENSCLAT00000011231	PUM1-202	5661	XM_005395013	ENSCLAP00000011096	1092 (aa)	XP_005395070	UPI00038EA53B
ENSCLAT00000011230	PUM1-201	5952	XM_005395006	ENSCLAP00000011095	1189 (aa)	XP_005395063	UPI00038ED965
ENSCLAT00000011233	PUM1-204	4001	XM_005395011	ENSCLAP00000011098	1108 (aa)	XP_005395068	UPI00038EE870
ENSCLAT00000011232	PUM1-203	4659	XM_005395014	ENSCLAP00000011097	944 (aa)	XP_005395071	UPI00038EDD9E

Gene Model

Click here to download ENSCLAG00000007662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000007662's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000007662	PUM1	85	88.647	ENSCLAG00000006048	PUM2	100	88.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000007662	PUM1	100	99.515	ENSG00000134644	PUM1	100	99.411	Homo_sapiens
ENSCLAG00000007662	PUM1	90	91.325	ENSAPOG00000021632	pum1	100	90.843	Acanthochromis_polyacanthus
ENSCLAG00000007662	PUM1	100	99.306	ENSAMEG00000017656	PUM1	97	98.992	Ailuropoda_melanoleuca
ENSCLAG00000007662	PUM1	100	81.064	ENSACIG00000021013	pum1	100	76.261	Amphilophus_citrinellus
ENSCLAG00000007662	PUM1	90	91.325	ENSAOCG00000003944	pum1	100	90.843	Amphiprion_ocellaris
ENSCLAG00000007662	PUM1	90	91.325	ENSAPEG00000014550	pum1	100	90.843	Amphiprion_percula
ENSCLAG00000007662	PUM1	100	81.930	ENSATEG00000016004	pum1	100	90.843	Anabas_testudineus
ENSCLAG00000007662	PUM1	100	97.761	ENSAPLG00000009351	PUM1	100	97.477	Anas_platyrhynchos
ENSCLAG00000007662	PUM1	100	97.826	ENSACAG00000000682	PUM1	98	95.374	Anolis_carolinensis
ENSCLAG00000007662	PUM1	100	99.306	ENSANAG00000027865	PUM1	100	99.306	Aotus_nancymaae
ENSCLAG00000007662	PUM1	90	76.481	ENSACLG00000019354	pum1	100	78.743	Astatotilapia_calliptera
ENSCLAG00000007662	PUM1	100	92.512	ENSAMXG00000020607	pum1	92	92.512	Astyanax_mexicanus
ENSCLAG00000007662	PUM1	100	99.306	ENSBTAG00000018979	PUM1	100	99.306	Bos_taurus
ENSCLAG00000007662	PUM1	100	99.306	ENSCJAG00000006035	PUM1	100	99.306	Callithrix_jacchus
ENSCLAG00000007662	PUM1	100	99.306	ENSCAFG00000011205	PUM1	100	96.804	Canis_familiaris
ENSCLAG00000007662	PUM1	92	97.239	ENSCAFG00020024616	PUM1	99	98.387	Canis_lupus_dingo
ENSCLAG00000007662	PUM1	100	99.306	ENSCHIG00000012952	PUM1	100	99.097	Capra_hircus
ENSCLAG00000007662	PUM1	100	99.075	ENSTSYG00000008868	PUM1	100	99.075	Carlito_syrichta
ENSCLAG00000007662	PUM1	100	100.000	ENSCPOG00000031613	PUM1	100	100.000	Cavia_porcellus
ENSCLAG00000007662	PUM1	100	99.359	ENSCATG00000017991	PUM1	100	99.517	Cercocebus_atys
ENSCLAG00000007662	PUM1	100	99.306	ENSCSAG00000001028	PUM1	100	98.500	Chlorocebus_sabaeus
ENSCLAG00000007662	PUM1	99	96.264	ENSCHOG00000010245	PUM1	93	96.264	Choloepus_hoffmanni
ENSCLAG00000007662	PUM1	100	97.585	ENSCPBG00000009288	PUM1	100	97.585	Chrysemys_picta_bellii
ENSCLAG00000007662	PUM1	100	99.458	ENSCANG00000042606	PUM1	100	99.458	Colobus_angolensis_palliatus
ENSCLAG00000007662	PUM1	100	99.515	ENSCGRG00001024949	Pum1	100	98.901	Cricetulus_griseus_chok1gshd
ENSCLAG00000007662	PUM1	100	99.515	ENSCGRG00000014197	Pum1	100	98.901	Cricetulus_griseus_crigri
ENSCLAG00000007662	PUM1	89	82.268	ENSCSEG00000015981	pum1	93	91.283	Cynoglossus_semilaevis
ENSCLAG00000007662	PUM1	100	80.569	ENSCVAG00000007043	pum1	100	75.475	Cyprinodon_variegatus
ENSCLAG00000007662	PUM1	100	84.491	ENSDARG00000099256	pum1	95	93.092	Danio_rerio
ENSCLAG00000007662	PUM1	100	99.306	ENSDNOG00000010939	PUM1	100	98.823	Dasypus_novemcinctus
ENSCLAG00000007662	PUM1	89	98.684	ENSDORG00000001875	Pum1	100	99.517	Dipodomys_ordii
ENSCLAG00000007662	PUM1	85	100.000	ENSETEG00000004355	PUM1	87	93.463	Echinops_telfairi
ENSCLAG00000007662	PUM1	100	99.306	ENSEASG00005010813	PUM1	100	98.738	Equus_asinus_asinus
ENSCLAG00000007662	PUM1	100	98.738	ENSECAG00000021369	PUM1	100	98.738	Equus_caballus
ENSCLAG00000007662	PUM1	80	99.383	ENSEEUG00000003871	PUM1	74	99.661	Erinaceus_europaeus
ENSCLAG00000007662	PUM1	100	83.109	ENSELUG00000002409	pum1	95	92.995	Esox_lucius
ENSCLAG00000007662	PUM1	100	99.306	ENSFCAG00000010374	PUM1	100	99.583	Felis_catus
ENSCLAG00000007662	PUM1	100	96.168	ENSFALG00000001214	PUM1	97	94.807	Ficedula_albicollis
ENSCLAG00000007662	PUM1	100	100.000	ENSFDAG00000011319	PUM1	100	100.000	Fukomys_damarensis
ENSCLAG00000007662	PUM1	91	90.843	ENSGMOG00000010491	pum1	94	90.361	Gadus_morhua
ENSCLAG00000007662	PUM1	100	97.886	ENSGALG00000042598	PUM1	100	97.645	Gallus_gallus
ENSCLAG00000007662	PUM1	100	80.693	ENSGAFG00000015617	pum1	100	90.120	Gambusia_affinis
ENSCLAG00000007662	PUM1	100	80.788	ENSGACG00000005717	pum1	100	76.112	Gasterosteus_aculeatus
ENSCLAG00000007662	PUM1	100	97.585	ENSGAGG00000001290	PUM1	100	97.225	Gopherus_agassizii
ENSCLAG00000007662	PUM1	100	99.458	ENSGGOG00000011983	PUM1	100	99.458	Gorilla_gorilla
ENSCLAG00000007662	PUM1	100	80.817	ENSHBUG00000018718	pum1	100	76.053	Haplochromis_burtoni
ENSCLAG00000007662	PUM1	100	99.411	ENSHGLG00000013819	Pum1	100	99.411	Heterocephalus_glaber_female
ENSCLAG00000007662	PUM1	100	99.411	ENSHGLG00100008621	Pum1	100	99.411	Heterocephalus_glaber_male
ENSCLAG00000007662	PUM1	90	74.838	ENSHCOG00000005149	pum1	100	72.710	Hippocampus_comes
ENSCLAG00000007662	PUM1	100	91.787	ENSIPUG00000020421	pum1	93	91.787	Ictalurus_punctatus
ENSCLAG00000007662	PUM1	100	99.517	ENSSTOG00000010757	PUM1	100	99.451	Ictidomys_tridecemlineatus
ENSCLAG00000007662	PUM1	100	99.306	ENSJJAG00000000530	Pum1	100	99.306	Jaculus_jaculus
ENSCLAG00000007662	PUM1	100	81.314	ENSKMAG00000003481	pum1	94	90.120	Kryptolebias_marmoratus
ENSCLAG00000007662	PUM1	100	91.325	ENSLBEG00000002527	pum1	94	90.843	Labrus_bergylta
ENSCLAG00000007662	PUM1	100	88.352	ENSLACG00000017188	PUM1	99	86.428	Latimeria_chalumnae
ENSCLAG00000007662	PUM1	100	95.894	ENSLOCG00000005210	pum1	95	95.894	Lepisosteus_oculatus
ENSCLAG00000007662	PUM1	100	98.570	ENSLAFG00000003178	PUM1	100	98.570	Loxodonta_africana
ENSCLAG00000007662	PUM1	100	99.359	ENSMFAG00000010291	PUM1	100	99.517	Macaca_fascicularis
ENSCLAG00000007662	PUM1	100	99.458	ENSMMUG00000013520	PUM1	100	99.458	Macaca_mulatta
ENSCLAG00000007662	PUM1	100	99.458	ENSMNEG00000034639	PUM1	100	99.458	Macaca_nemestrina
ENSCLAG00000007662	PUM1	100	99.458	ENSMLEG00000038743	PUM1	100	99.458	Mandrillus_leucophaeus
ENSCLAG00000007662	PUM1	100	81.725	ENSMAMG00000011606	pum1	94	90.602	Mastacembelus_armatus
ENSCLAG00000007662	PUM1	100	80.817	ENSMZEG00005005834	pum1	100	76.053	Maylandia_zebra
ENSCLAG00000007662	PUM1	100	97.826	ENSMGAG00000000724	PUM1	100	97.393	Meleagris_gallopavo
ENSCLAG00000007662	PUM1	100	99.517	ENSMAUG00000022090	Pum1	100	98.993	Mesocricetus_auratus
ENSCLAG00000007662	PUM1	100	96.480	ENSMICG00000012213	-	100	96.480	Microcebus_murinus
ENSCLAG00000007662	PUM1	100	99.097	ENSMICG00000007713	-	100	99.097	Microcebus_murinus
ENSCLAG00000007662	PUM1	100	99.275	ENSMOCG00000015463	Pum1	100	98.907	Microtus_ochrogaster
ENSCLAG00000007662	PUM1	90	88.046	ENSMMOG00000019817	pum1	100	90.602	Mola_mola
ENSCLAG00000007662	PUM1	100	97.589	ENSMODG00000017067	PUM1	100	97.565	Monodelphis_domestica
ENSCLAG00000007662	PUM1	90	88.276	ENSMALG00000016399	pum1	100	90.843	Monopterus_albus
ENSCLAG00000007662	PUM1	100	99.757	MGP_CAROLIEiJ_G0026549	Pum1	100	98.823	Mus_caroli
ENSCLAG00000007662	PUM1	100	100.000	ENSMUSG00000028580	Pum1	100	99.075	Mus_musculus
ENSCLAG00000007662	PUM1	100	100.000	MGP_PahariEiJ_G0028881	Pum1	100	98.907	Mus_pahari
ENSCLAG00000007662	PUM1	100	100.000	MGP_SPRETEiJ_G0027529	Pum1	100	98.991	Mus_spretus
ENSCLAG00000007662	PUM1	100	99.306	ENSMPUG00000015454	PUM1	100	98.654	Mustela_putorius_furo
ENSCLAG00000007662	PUM1	100	99.306	ENSMLUG00000006490	PUM1	100	98.823	Myotis_lucifugus
ENSCLAG00000007662	PUM1	100	99.517	ENSNGAG00000002378	Pum1	100	99.258	Nannospalax_galili
ENSCLAG00000007662	PUM1	100	78.138	ENSNBRG00000010689	pum1	100	83.210	Neolamprologus_brichardi
ENSCLAG00000007662	PUM1	100	98.611	ENSNLEG00000001151	PUM1	100	98.611	Nomascus_leucogenys
ENSCLAG00000007662	PUM1	84	96.622	ENSMEUG00000000976	-	82	96.622	Notamacropus_eugenii
ENSCLAG00000007662	PUM1	84	100.000	ENSOPRG00000001776	PUM1	76	100.000	Ochotona_princeps
ENSCLAG00000007662	PUM1	100	99.634	ENSODEG00000003465	PUM1	100	99.634	Octodon_degus
ENSCLAG00000007662	PUM1	100	81.373	ENSONIG00000002290	pum1	93	90.602	Oreochromis_niloticus
ENSCLAG00000007662	PUM1	80	83.462	ENSOANG00000004902	-	100	77.766	Ornithorhynchus_anatinus
ENSCLAG00000007662	PUM1	100	99.306	ENSOCUG00000008641	PUM1	99	98.738	Oryctolagus_cuniculus
ENSCLAG00000007662	PUM1	100	81.683	ENSORLG00000011482	pum1	94	90.361	Oryzias_latipes
ENSCLAG00000007662	PUM1	100	81.807	ENSORLG00020019461	pum1	100	75.802	Oryzias_latipes_hni
ENSCLAG00000007662	PUM1	100	81.807	ENSORLG00015011375	pum1	100	75.885	Oryzias_latipes_hsok
ENSCLAG00000007662	PUM1	90	92.530	ENSOMEG00000009312	pum1	100	90.120	Oryzias_melastigma
ENSCLAG00000007662	PUM1	100	98.611	ENSOGAG00000011063	PUM1	100	96.390	Otolemur_garnettii
ENSCLAG00000007662	PUM1	100	99.306	ENSOARG00000001899	PUM1	100	99.188	Ovis_aries
ENSCLAG00000007662	PUM1	100	99.458	ENSPPAG00000044003	PUM1	100	99.458	Pan_paniscus
ENSCLAG00000007662	PUM1	100	99.306	ENSPPRG00000001370	PUM1	100	99.306	Panthera_pardus
ENSCLAG00000007662	PUM1	100	99.306	ENSPTIG00000010798	PUM1	100	99.306	Panthera_tigris_altaica
ENSCLAG00000007662	PUM1	100	99.458	ENSPTRG00000000453	PUM1	100	99.458	Pan_troglodytes
ENSCLAG00000007662	PUM1	100	99.327	ENSPANG00000016338	PUM1	100	99.517	Papio_anubis
ENSCLAG00000007662	PUM1	100	82.497	ENSPKIG00000010578	pum1	100	78.071	Paramormyrops_kingsleyae
ENSCLAG00000007662	PUM1	100	97.756	ENSPSIG00000014118	PUM1	100	97.561	Pelodiscus_sinensis
ENSCLAG00000007662	PUM1	100	76.507	ENSPMGG00000005836	pum1	90	91.525	Periophthalmus_magnuspinnatus
ENSCLAG00000007662	PUM1	100	99.517	ENSPEMG00000010009	Pum1	100	99.075	Peromyscus_maniculatus_bairdii
ENSCLAG00000007662	PUM1	100	97.799	ENSPCIG00000014151	PUM1	100	97.886	Phascolarctos_cinereus
ENSCLAG00000007662	PUM1	94	90.602	ENSPFOG00000007289	pum1	93	90.120	Poecilia_formosa
ENSCLAG00000007662	PUM1	100	90.602	ENSPLAG00000007256	pum1	94	90.120	Poecilia_latipinna
ENSCLAG00000007662	PUM1	85	82.716	ENSPMEG00000019543	pum1	99	78.125	Poecilia_mexicana
ENSCLAG00000007662	PUM1	100	80.693	ENSPREG00000005195	pum1	100	80.630	Poecilia_reticulata
ENSCLAG00000007662	PUM1	100	99.306	ENSPPYG00000001621	PUM1	100	97.362	Pongo_abelii
ENSCLAG00000007662	PUM1	84	98.765	ENSPCAG00000001979	PUM1	74	98.765	Procavia_capensis
ENSCLAG00000007662	PUM1	100	99.097	ENSPCOG00000004398	PUM1	100	99.097	Propithecus_coquereli
ENSCLAG00000007662	PUM1	100	99.306	ENSPVAG00000005207	PUM1	97	96.972	Pteropus_vampyrus
ENSCLAG00000007662	PUM1	100	80.817	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSCLAG00000007662	PUM1	100	92.754	ENSPNAG00000026728	pum1	95	92.754	Pygocentrus_nattereri
ENSCLAG00000007662	PUM1	100	100.000	ENSRNOG00000011709	Pum1	100	98.823	Rattus_norvegicus
ENSCLAG00000007662	PUM1	100	99.359	ENSRBIG00000042521	PUM1	100	99.517	Rhinopithecus_bieti
ENSCLAG00000007662	PUM1	100	99.515	ENSRROG00000020156	PUM1	100	99.458	Rhinopithecus_roxellana
ENSCLAG00000007662	PUM1	100	99.306	ENSSBOG00000032037	PUM1	100	99.306	Saimiri_boliviensis_boliviensis
ENSCLAG00000007662	PUM1	100	97.589	ENSSHAG00000010918	PUM1	100	97.481	Sarcophilus_harrisii
ENSCLAG00000007662	PUM1	100	91.325	ENSSMAG00000010918	pum1	100	90.843	Scophthalmus_maximus
ENSCLAG00000007662	PUM1	100	81.930	ENSSDUG00000009021	pum1	94	90.843	Seriola_dumerili
ENSCLAG00000007662	PUM1	100	80.941	ENSSLDG00000009667	pum1	93	90.843	Seriola_lalandi_dorsalis
ENSCLAG00000007662	PUM1	99	99.306	ENSSARG00000003055	PUM1	91	99.558	Sorex_araneus
ENSCLAG00000007662	PUM1	100	97.758	ENSSPUG00000006267	PUM1	100	96.972	Sphenodon_punctatus
ENSCLAG00000007662	PUM1	90	91.325	ENSSPAG00000016636	pum1	100	90.843	Stegastes_partitus
ENSCLAG00000007662	PUM1	100	99.327	ENSSSCG00000003591	PUM1	100	99.583	Sus_scrofa
ENSCLAG00000007662	PUM1	100	91.325	ENSTRUG00000013121	pum1	94	90.843	Takifugu_rubripes
ENSCLAG00000007662	PUM1	100	91.106	ENSTNIG00000016983	pum1	93	90.625	Tetraodon_nigroviridis
ENSCLAG00000007662	PUM1	93	96.341	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSCLAG00000007662	PUM1	92	98.997	ENSTTRG00000007436	PUM1	90	98.997	Tursiops_truncatus
ENSCLAG00000007662	PUM1	99	98.525	ENSUAMG00000018262	-	100	98.525	Ursus_americanus
ENSCLAG00000007662	PUM1	100	98.829	ENSUMAG00000009211	PUM1	100	99.275	Ursus_maritimus
ENSCLAG00000007662	PUM1	100	98.755	ENSVPAG00000005902	PUM1	92	99.322	Vicugna_pacos
ENSCLAG00000007662	PUM1	100	99.306	ENSVVUG00000014631	PUM1	100	99.275	Vulpes_vulpes
ENSCLAG00000007662	PUM1	100	88.323	ENSXETG00000012904	pum1	99	86.398	Xenopus_tropicalis
ENSCLAG00000007662	PUM1	100	80.693	ENSXMAG00000002945	pum1	100	77.743	Xiphophorus_maculatus