EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000007682 (Gene tree)
Gene ID: 102014214
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 59239 bases
Position: chrJH721916.1:14855077-14914315
Accession: 102014214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000011119	cwf21	PF08312.12	6e-17	1	1
ENSCLAP00000011120	cwf21	PF08312.12	5.9e-16	1	1
ENSCLAP00000011120	SRRM_C	PF15230.6	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000011256	SRRM3-202	1965	XM_005396897	ENSCLAP00000011120	654 (aa)	XP_005396954	-
ENSCLAT00000011255	SRRM3-201	3560	-	ENSCLAP00000011119	124 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000007682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000007682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000007682	SRRM3	100	91.129	ENSG00000177679	SRRM3	89	85.204	Homo_sapiens
ENSCLAG00000007682	SRRM3	90	76.786	ENSAPLG00000004545	SRRM3	55	64.384	Anas_platyrhynchos
ENSCLAG00000007682	SRRM3	93	73.043	ENSACAG00000000452	SRRM3	73	64.828	Anolis_carolinensis
ENSCLAG00000007682	SRRM3	100	95.161	ENSANAG00000031983	SRRM3	59	83.333	Aotus_nancymaae
ENSCLAG00000007682	SRRM3	100	90.323	ENSBTAG00000007879	-	98	83.036	Bos_taurus
ENSCLAG00000007682	SRRM3	100	94.355	ENSCJAG00000016307	SRRM3	89	84.524	Callithrix_jacchus
ENSCLAG00000007682	SRRM3	100	91.935	ENSCAFG00000013537	SRRM3	79	90.774	Canis_familiaris
ENSCLAG00000007682	SRRM3	100	91.935	ENSCAFG00020013073	SRRM3	89	75.966	Canis_lupus_dingo
ENSCLAG00000007682	SRRM3	100	91.129	ENSCHIG00000014018	SRRM3	87	87.500	Capra_hircus
ENSCLAG00000007682	SRRM3	90	82.203	ENSCPOG00000038685	SRRM3	94	83.923	Cavia_porcellus
ENSCLAG00000007682	SRRM3	100	95.161	ENSCCAG00000033359	SRRM3	89	84.864	Cebus_capucinus
ENSCLAG00000007682	SRRM3	100	93.548	ENSCATG00000043129	SRRM3	85	84.776	Cercocebus_atys
ENSCLAG00000007682	SRRM3	100	92.742	ENSCSAG00000018140	SRRM3	97	83.533	Chlorocebus_sabaeus
ENSCLAG00000007682	SRRM3	90	80.357	ENSCPBG00000027784	SRRM3	66	67.577	Chrysemys_picta_bellii
ENSCLAG00000007682	SRRM3	100	93.548	ENSCGRG00001011385	Srrm3	89	82.765	Cricetulus_griseus_chok1gshd
ENSCLAG00000007682	SRRM3	94	88.889	ENSDNOG00000046922	SRRM3	90	71.599	Dasypus_novemcinctus
ENSCLAG00000007682	SRRM3	100	91.129	ENSEASG00005016840	-	88	91.691	Equus_asinus_asinus
ENSCLAG00000007682	SRRM3	100	90.323	ENSECAG00000022142	-	88	91.667	Equus_caballus
ENSCLAG00000007682	SRRM3	100	91.935	ENSFCAG00000044112	SRRM3	89	83.051	Felis_catus
ENSCLAG00000007682	SRRM3	97	73.333	ENSFALG00000009603	SRRM3	67	68.493	Ficedula_albicollis
ENSCLAG00000007682	SRRM3	72	96.721	ENSFDAG00000016913	SRRM3	100	97.531	Fukomys_damarensis
ENSCLAG00000007682	SRRM3	97	71.667	ENSGALG00000001932	SRRM3	64	67.123	Gallus_gallus
ENSCLAG00000007682	SRRM3	90	80.357	ENSGAGG00000021058	SRRM3	71	67.347	Gopherus_agassizii
ENSCLAG00000007682	SRRM3	100	87.097	ENSGGOG00000036497	-	66	78.646	Gorilla_gorilla
ENSCLAG00000007682	SRRM3	100	95.968	ENSHGLG00000015576	SRRM3	100	95.968	Heterocephalus_glaber_female
ENSCLAG00000007682	SRRM3	100	93.548	ENSSTOG00000014181	SRRM3	100	93.548	Ictidomys_tridecemlineatus
ENSCLAG00000007682	SRRM3	99	70.400	ENSJJAG00000023441	Srrm3	97	77.663	Jaculus_jaculus
ENSCLAG00000007682	SRRM3	55	78.125	ENSLACG00000008008	SRRM3	51	74.286	Latimeria_chalumnae
ENSCLAG00000007682	SRRM3	100	71.774	ENSMMUG00000046728	SRRM3	87	67.023	Macaca_mulatta
ENSCLAG00000007682	SRRM3	97	73.333	ENSMGAG00000003690	SRRM3	75	63.823	Meleagris_gallopavo
ENSCLAG00000007682	SRRM3	100	92.742	ENSMAUG00000017613	Srrm3	100	92.742	Mesocricetus_auratus
ENSCLAG00000007682	SRRM3	100	95.161	ENSMICG00000010668	SRRM3	87	93.155	Microcebus_murinus
ENSCLAG00000007682	SRRM3	100	92.742	ENSMOCG00000002565	Srrm3	89	82.935	Microtus_ochrogaster
ENSCLAG00000007682	SRRM3	94	85.345	ENSMODG00000029593	SRRM3	58	80.205	Monodelphis_domestica
ENSCLAG00000007682	SRRM3	84	58.268	ENSMALG00000000844	-	54	66.176	Monopterus_albus
ENSCLAG00000007682	SRRM3	100	92.742	MGP_CAROLIEiJ_G0027845	-	97	90.774	Mus_caroli
ENSCLAG00000007682	SRRM3	100	92.742	ENSMUSG00000039860	Srrm3	100	92.742	Mus_musculus
ENSCLAG00000007682	SRRM3	100	93.548	MGP_PahariEiJ_G0024425	Srrm3	100	93.548	Mus_pahari
ENSCLAG00000007682	SRRM3	100	91.935	MGP_SPRETEiJ_G0028844	Srrm3	100	91.935	Mus_spretus
ENSCLAG00000007682	SRRM3	100	87.097	ENSNLEG00000008423	-	83	76.190	Nomascus_leucogenys
ENSCLAG00000007682	SRRM3	100	94.355	ENSODEG00000015988	SRRM3	89	88.908	Octodon_degus
ENSCLAG00000007682	SRRM3	98	70.492	ENSOANG00000004590	-	57	62.255	Ornithorhynchus_anatinus
ENSCLAG00000007682	SRRM3	98	89.344	ENSOGAG00000030805	SRRM3	89	82.483	Otolemur_garnettii
ENSCLAG00000007682	SRRM3	100	84.677	ENSPPRG00000006254	SRRM3	65	90.625	Panthera_pardus
ENSCLAG00000007682	SRRM3	100	92.742	ENSPTRG00000019317	SRRM3	89	84.354	Pan_troglodytes
ENSCLAG00000007682	SRRM3	90	93.750	ENSPANG00000000776	SRRM3	84	93.750	Papio_anubis
ENSCLAG00000007682	SRRM3	88	72.477	ENSPKIG00000017233	SRRM3	59	58.519	Paramormyrops_kingsleyae
ENSCLAG00000007682	SRRM3	100	93.548	ENSPEMG00000012358	-	100	93.548	Peromyscus_maniculatus_bairdii
ENSCLAG00000007682	SRRM3	100	67.742	ENSPCAG00000013700	SRRM3	76	79.339	Procavia_capensis
ENSCLAG00000007682	SRRM3	100	93.548	ENSPCOG00000028464	SRRM3	89	84.694	Propithecus_coquereli
ENSCLAG00000007682	SRRM3	100	89.516	ENSRNOG00000001439	Srrm3	89	82.765	Rattus_norvegicus
ENSCLAG00000007682	SRRM3	100	92.742	ENSRROG00000034980	SRRM3	80	94.318	Rhinopithecus_roxellana
ENSCLAG00000007682	SRRM3	84	56.154	ENSSMAG00000000476	SRRM3	56	65.753	Scophthalmus_maximus
ENSCLAG00000007682	SRRM3	89	78.182	ENSSPUG00000006285	SRRM3	65	78.182	Sphenodon_punctatus
ENSCLAG00000007682	SRRM3	56	96.429	ENSTNIG00000008549	-	56	52.489	Tetraodon_nigroviridis
ENSCLAG00000007682	SRRM3	90	92.793	ENSTTRG00000014836	-	62	83.471	Tursiops_truncatus