EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000007727 (Gene tree)
Gene ID: -
Gene Symbol: SALL3
Alias: ZNF796
Full Name: spalt like transcription factor 3
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 5088 bases
Position: chrJH721862.1:62157970-62163057
Accession: 102022445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000011184	zf-C2H2	PF00096.26	3.8e-25	1	5
ENSCLAP00000011184	zf-C2H2	PF00096.26	3.8e-25	2	5
ENSCLAP00000011184	zf-C2H2	PF00096.26	3.8e-25	3	5
ENSCLAP00000011184	zf-C2H2	PF00096.26	3.8e-25	4	5
ENSCLAP00000011184	zf-C2H2	PF00096.26	3.8e-25	5	5
ENSCLAP00000011184	zf-met	PF12874.7	5.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000011320	SALL3-201	3654	XM_005373104	ENSCLAP00000011184	1208 (aa)	XP_005373161	-

Gene Model

Click here to download ENSCLAG00000007727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000007727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000007727	SALL3	99	65.306	ENSCLAG00000006380	SALL1	98	65.306
ENSCLAG00000007727	SALL3	60	55.102	ENSCLAG00000012556	-	70	59.184
ENSCLAG00000007727	SALL3	89	63.462	ENSCLAG00000010479	SALL4	97	52.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000007727	SALL3	99	90.037	ENSG00000256463	SALL3	97	90.037	Homo_sapiens
ENSCLAG00000007727	SALL3	73	69.651	ENSAPOG00000020922	sall3a	70	68.849	Acanthochromis_polyacanthus
ENSCLAG00000007727	SALL3	99	51.738	ENSAPOG00000004264	sall3b	72	56.731	Acanthochromis_polyacanthus
ENSCLAG00000007727	SALL3	99	89.883	ENSAMEG00000010206	SALL3	99	89.883	Ailuropoda_melanoleuca
ENSCLAG00000007727	SALL3	80	59.046	ENSACIG00000019407	sall3b	97	59.378	Amphilophus_citrinellus
ENSCLAG00000007727	SALL3	81	74.194	ENSACIG00000014041	sall3a	98	74.194	Amphilophus_citrinellus
ENSCLAG00000007727	SALL3	78	74.194	ENSAOCG00000010863	sall3a	96	74.194	Amphiprion_ocellaris
ENSCLAG00000007727	SALL3	73	56.920	ENSAOCG00000012779	sall3b	72	57.127	Amphiprion_ocellaris
ENSCLAG00000007727	SALL3	73	68.999	ENSAPEG00000019278	sall3a	71	68.410	Amphiprion_percula
ENSCLAG00000007727	SALL3	78	56.402	ENSAPEG00000018170	sall3b	98	57.064	Amphiprion_percula
ENSCLAG00000007727	SALL3	72	59.820	ENSATEG00000004914	sall3b	72	58.584	Anabas_testudineus
ENSCLAG00000007727	SALL3	75	82.353	ENSATEG00000024524	sall3a	98	82.051	Anabas_testudineus
ENSCLAG00000007727	SALL3	100	77.599	ENSAPLG00000013214	SALL3	99	77.417	Anas_platyrhynchos
ENSCLAG00000007727	SALL3	100	77.383	ENSACAG00000000478	SALL3	73	85.297	Anolis_carolinensis
ENSCLAG00000007727	SALL3	99	87.823	ENSANAG00000032412	SALL3	97	87.823	Aotus_nancymaae
ENSCLAG00000007727	SALL3	73	58.640	ENSACLG00000001619	sall3b	72	58.110	Astatotilapia_calliptera
ENSCLAG00000007727	SALL3	78	70.022	ENSACLG00000022451	sall3a	99	69.694	Astatotilapia_calliptera
ENSCLAG00000007727	SALL3	76	68.421	ENSAMXG00000035442	sall3b	85	68.421	Astyanax_mexicanus
ENSCLAG00000007727	SALL3	99	63.844	ENSAMXG00000011185	sall3a	98	81.818	Astyanax_mexicanus
ENSCLAG00000007727	SALL3	99	84.133	ENSBTAG00000050200	SALL3	97	84.347	Bos_taurus
ENSCLAG00000007727	SALL3	99	88.192	ENSCJAG00000007332	SALL3	97	88.192	Callithrix_jacchus
ENSCLAG00000007727	SALL3	92	81.426	ENSCAFG00000000013	SALL3	100	81.095	Canis_familiaris
ENSCLAG00000007727	SALL3	92	91.440	ENSCAFG00020015092	SALL3	99	91.440	Canis_lupus_dingo
ENSCLAG00000007727	SALL3	99	84.502	ENSCHIG00000000145	SALL3	97	84.502	Capra_hircus
ENSCLAG00000007727	SALL3	86	85.327	ENSTSYG00000028846	SALL3	99	85.440	Carlito_syrichta
ENSCLAG00000007727	SALL3	93	95.378	ENSCAPG00000006496	SALL3	93	96.392	Cavia_aperea
ENSCLAG00000007727	SALL3	99	92.804	ENSCPOG00000008546	SALL3	99	92.390	Cavia_porcellus
ENSCLAG00000007727	SALL3	99	79.689	ENSCCAG00000034863	SALL3	97	80.428	Cebus_capucinus
ENSCLAG00000007727	SALL3	99	89.668	ENSCATG00000029727	SALL3	97	89.668	Cercocebus_atys
ENSCLAG00000007727	SALL3	99	89.668	ENSCSAG00000018244	SALL3	97	89.668	Chlorocebus_sabaeus
ENSCLAG00000007727	SALL3	65	80.074	ENSCHOG00000013939	-	91	80.074	Choloepus_hoffmanni
ENSCLAG00000007727	SALL3	100	87.085	ENSCPBG00000003657	SALL3	98	87.085	Chrysemys_picta_bellii
ENSCLAG00000007727	SALL3	86	85.714	ENSCANG00000030302	SALL3	99	85.714	Colobus_angolensis_palliatus
ENSCLAG00000007727	SALL3	99	90.037	ENSCGRG00001018203	Sall3	97	90.037	Cricetulus_griseus_chok1gshd
ENSCLAG00000007727	SALL3	99	84.258	ENSCGRG00000017127	Sall3	99	83.224	Cricetulus_griseus_crigri
ENSCLAG00000007727	SALL3	77	58.250	ENSCSEG00000009569	sall3b	97	58.075	Cynoglossus_semilaevis
ENSCLAG00000007727	SALL3	78	74.194	ENSCVAG00000009684	sall3a	94	74.194	Cyprinodon_variegatus
ENSCLAG00000007727	SALL3	97	86.275	ENSCVAG00000017005	sall3b	73	86.275	Cyprinodon_variegatus
ENSCLAG00000007727	SALL3	100	52.913	ENSDARG00000057586	sall3b	73	56.857	Danio_rerio
ENSCLAG00000007727	SALL3	99	59.435	ENSDARG00000079613	sall3a	70	68.124	Danio_rerio
ENSCLAG00000007727	SALL3	74	80.499	ENSDNOG00000025483	SALL3	99	79.487	Dasypus_novemcinctus
ENSCLAG00000007727	SALL3	73	85.962	ENSDORG00000002702	Sall3	91	85.061	Dipodomys_ordii
ENSCLAG00000007727	SALL3	79	84.191	ENSETEG00000001481	SALL3	97	84.191	Echinops_telfairi
ENSCLAG00000007727	SALL3	99	80.583	ENSEASG00005002071	SALL3	97	80.373	Equus_asinus_asinus
ENSCLAG00000007727	SALL3	99	80.968	ENSECAG00000015414	SALL3	97	80.535	Equus_caballus
ENSCLAG00000007727	SALL3	75	67.925	ENSELUG00000020351	sall3a	70	68.029	Esox_lucius
ENSCLAG00000007727	SALL3	99	52.370	ENSELUG00000009541	sall3b	70	59.519	Esox_lucius
ENSCLAG00000007727	SALL3	99	89.883	ENSFCAG00000028839	SALL3	96	89.883	Felis_catus
ENSCLAG00000007727	SALL3	100	78.514	ENSFALG00000013343	SALL3	97	77.985	Ficedula_albicollis
ENSCLAG00000007727	SALL3	100	92.893	ENSFDAG00000014697	SALL3	98	92.225	Fukomys_damarensis
ENSCLAG00000007727	SALL3	72	70.134	ENSGMOG00000006649	sall3a	73	68.187	Gadus_morhua
ENSCLAG00000007727	SALL3	100	87.454	ENSGALG00000041404	SALL3	98	87.454	Gallus_gallus
ENSCLAG00000007727	SALL3	78	72.581	ENSGAFG00000001581	sall3a	96	72.581	Gambusia_affinis
ENSCLAG00000007727	SALL3	100	45.462	ENSGAFG00000014435	-	69	61.538	Gambusia_affinis
ENSCLAG00000007727	SALL3	99	50.000	ENSGACG00000002533	sall3b	77	53.119	Gasterosteus_aculeatus
ENSCLAG00000007727	SALL3	99	77.255	ENSGACG00000005503	sall3a	68	77.255	Gasterosteus_aculeatus
ENSCLAG00000007727	SALL3	100	79.433	ENSGAGG00000000925	SALL3	97	77.868	Gopherus_agassizii
ENSCLAG00000007727	SALL3	99	90.037	ENSGGOG00000008127	SALL3	97	90.037	Gorilla_gorilla
ENSCLAG00000007727	SALL3	73	69.214	ENSHBUG00000004486	sall3a	72	67.996	Haplochromis_burtoni
ENSCLAG00000007727	SALL3	78	58.817	ENSHBUG00000018127	sall3b	97	58.843	Haplochromis_burtoni
ENSCLAG00000007727	SALL3	99	93.548	ENSHGLG00000000824	SALL3	97	92.887	Heterocephalus_glaber_female
ENSCLAG00000007727	SALL3	99	91.150	ENSHGLG00100008694	SALL3	97	90.405	Heterocephalus_glaber_male
ENSCLAG00000007727	SALL3	85	63.462	ENSHCOG00000004745	sall3b	62	63.462	Hippocampus_comes
ENSCLAG00000007727	SALL3	99	58.629	ENSHCOG00000010423	sall3a	99	80.000	Hippocampus_comes
ENSCLAG00000007727	SALL3	99	49.763	ENSIPUG00000003006	sall3b	73	52.880	Ictalurus_punctatus
ENSCLAG00000007727	SALL3	99	87.010	ENSSTOG00000004145	SALL3	97	85.703	Ictidomys_tridecemlineatus
ENSCLAG00000007727	SALL3	99	91.513	ENSJJAG00000014351	Sall3	97	91.513	Jaculus_jaculus
ENSCLAG00000007727	SALL3	78	72.414	ENSKMAG00000003846	sall3a	99	72.414	Kryptolebias_marmoratus
ENSCLAG00000007727	SALL3	73	53.941	ENSKMAG00000012418	sall3b	72	53.524	Kryptolebias_marmoratus
ENSCLAG00000007727	SALL3	76	58.843	ENSLBEG00000015706	sall3b	95	58.305	Labrus_bergylta
ENSCLAG00000007727	SALL3	73	69.006	ENSLBEG00000005152	sall3a	70	68.683	Labrus_bergylta
ENSCLAG00000007727	SALL3	99	70.048	ENSLOCG00000007831	sall3a	72	76.923	Lepisosteus_oculatus
ENSCLAG00000007727	SALL3	100	85.978	ENSLAFG00000013521	SALL3	99	85.978	Loxodonta_africana
ENSCLAG00000007727	SALL3	99	89.668	ENSMFAG00000031402	SALL3	94	83.038	Macaca_fascicularis
ENSCLAG00000007727	SALL3	99	90.037	ENSMMUG00000000286	SALL3	77	90.037	Macaca_mulatta
ENSCLAG00000007727	SALL3	74	89.668	ENSMNEG00000029916	SALL3	76	89.668	Macaca_nemestrina
ENSCLAG00000007727	SALL3	76	58.974	ENSMAMG00000006101	sall3b	95	59.197	Mastacembelus_armatus
ENSCLAG00000007727	SALL3	99	60.076	ENSMAMG00000001276	sall3a	76	65.156	Mastacembelus_armatus
ENSCLAG00000007727	SALL3	78	70.022	ENSMZEG00005007586	sall3a	99	69.694	Maylandia_zebra
ENSCLAG00000007727	SALL3	73	58.751	ENSMZEG00005026224	sall3b	72	58.217	Maylandia_zebra
ENSCLAG00000007727	SALL3	100	77.930	ENSMGAG00000002297	SALL3	97	77.498	Meleagris_gallopavo
ENSCLAG00000007727	SALL3	99	89.668	ENSMAUG00000011828	Sall3	97	89.668	Mesocricetus_auratus
ENSCLAG00000007727	SALL3	99	87.454	ENSMICG00000017395	SALL3	96	85.957	Microcebus_murinus
ENSCLAG00000007727	SALL3	99	84.838	ENSMOCG00000013205	Sall3	97	83.715	Microtus_ochrogaster
ENSCLAG00000007727	SALL3	77	57.684	ENSMMOG00000014246	sall3b	97	57.620	Mola_mola
ENSCLAG00000007727	SALL3	77	78.182	ENSMMOG00000003253	sall3a	98	78.182	Mola_mola
ENSCLAG00000007727	SALL3	100	79.516	ENSMODG00000012231	SALL3	97	78.896	Monodelphis_domestica
ENSCLAG00000007727	SALL3	72	56.951	ENSMALG00000015200	sall3b	70	56.150	Monopterus_albus
ENSCLAG00000007727	SALL3	99	84.886	MGP_CAROLIEiJ_G0022442	Sall3	97	83.633	Mus_caroli
ENSCLAG00000007727	SALL3	99	84.967	ENSMUSG00000024565	Sall3	97	83.961	Mus_musculus
ENSCLAG00000007727	SALL3	99	85.119	MGP_PahariEiJ_G0019170	Sall3	97	83.797	Mus_pahari
ENSCLAG00000007727	SALL3	99	84.910	MGP_SPRETEiJ_G0023357	Sall3	97	83.824	Mus_spretus
ENSCLAG00000007727	SALL3	87	80.966	ENSMPUG00000016646	SALL3	96	82.115	Mustela_putorius_furo
ENSCLAG00000007727	SALL3	99	87.454	ENSMLUG00000010582	SALL3	99	87.454	Myotis_lucifugus
ENSCLAG00000007727	SALL3	99	91.513	ENSNGAG00000023772	Sall3	97	91.513	Nannospalax_galili
ENSCLAG00000007727	SALL3	78	58.929	ENSNBRG00000016034	sall3b	97	58.954	Neolamprologus_brichardi
ENSCLAG00000007727	SALL3	73	69.197	ENSNBRG00000008974	sall3a	72	68.206	Neolamprologus_brichardi
ENSCLAG00000007727	SALL3	99	90.775	ENSNLEG00000008217	SALL3	97	90.775	Nomascus_leucogenys
ENSCLAG00000007727	SALL3	99	94.834	ENSODEG00000002692	SALL3	97	94.834	Octodon_degus
ENSCLAG00000007727	SALL3	72	58.989	ENSONIG00000013791	sall3b	72	58.414	Oreochromis_niloticus
ENSCLAG00000007727	SALL3	73	68.398	ENSONIG00000007305	sall3a	73	68.168	Oreochromis_niloticus
ENSCLAG00000007727	SALL3	53	82.393	ENSOANG00000010135	-	100	82.735	Ornithorhynchus_anatinus
ENSCLAG00000007727	SALL3	88	65.306	ENSOCUG00000004364	-	81	63.462	Oryctolagus_cuniculus
ENSCLAG00000007727	SALL3	89	78.675	ENSOCUG00000029398	SALL3	98	79.693	Oryctolagus_cuniculus
ENSCLAG00000007727	SALL3	99	61.959	ENSORLG00000020718	sall3a	70	69.013	Oryzias_latipes
ENSCLAG00000007727	SALL3	99	44.472	ENSORLG00020015105	sall3b	69	47.267	Oryzias_latipes_hni
ENSCLAG00000007727	SALL3	99	62.014	ENSORLG00020001794	sall3a	72	69.141	Oryzias_latipes_hni
ENSCLAG00000007727	SALL3	99	62.014	ENSORLG00015018152	sall3a	97	80.357	Oryzias_latipes_hsok
ENSCLAG00000007727	SALL3	75	68.485	ENSORLG00015005877	sall3b	97	47.210	Oryzias_latipes_hsok
ENSCLAG00000007727	SALL3	73	70.130	ENSOMEG00000011390	sall3a	71	69.175	Oryzias_melastigma
ENSCLAG00000007727	SALL3	99	89.299	ENSOGAG00000031681	SALL3	97	89.299	Otolemur_garnettii
ENSCLAG00000007727	SALL3	81	82.667	ENSOARG00000004353	SALL3	95	86.765	Ovis_aries
ENSCLAG00000007727	SALL3	89	86.677	ENSPPAG00000029586	-	100	87.249	Pan_paniscus
ENSCLAG00000007727	SALL3	84	84.753	ENSPTRG00000010126	SALL3	96	84.753	Pan_troglodytes
ENSCLAG00000007727	SALL3	99	89.299	ENSPANG00000006485	SALL3	98	89.299	Papio_anubis
ENSCLAG00000007727	SALL3	99	61.652	ENSPKIG00000018271	SALL3	98	71.429	Paramormyrops_kingsleyae
ENSCLAG00000007727	SALL3	99	81.818	ENSPKIG00000013427	sall3a	69	81.818	Paramormyrops_kingsleyae
ENSCLAG00000007727	SALL3	100	78.560	ENSPSIG00000008556	SALL3	99	77.073	Pelodiscus_sinensis
ENSCLAG00000007727	SALL3	99	60.896	ENSPMGG00000017042	sall3a	70	68.550	Periophthalmus_magnuspinnatus
ENSCLAG00000007727	SALL3	75	53.659	ENSPMGG00000002913	sall3b	95	53.659	Periophthalmus_magnuspinnatus
ENSCLAG00000007727	SALL3	99	90.406	ENSPEMG00000022799	Sall3	97	90.406	Peromyscus_maniculatus_bairdii
ENSCLAG00000007727	SALL3	100	87.823	ENSPCIG00000002472	SALL3	98	87.823	Phascolarctos_cinereus
ENSCLAG00000007727	SALL3	73	50.112	ENSPFOG00000013292	sall3b	75	49.666	Poecilia_formosa
ENSCLAG00000007727	SALL3	73	50.112	ENSPLAG00000013919	sall3b	71	49.666	Poecilia_latipinna
ENSCLAG00000007727	SALL3	99	76.953	ENSPLAG00000018123	sall3a	98	74.194	Poecilia_latipinna
ENSCLAG00000007727	SALL3	75	49.662	ENSPMEG00000023703	sall3b	92	49.385	Poecilia_mexicana
ENSCLAG00000007727	SALL3	100	45.756	ENSPREG00000015079	sall3b	71	49.182	Poecilia_reticulata
ENSCLAG00000007727	SALL3	99	80.197	ENSPPYG00000009253	SALL3	99	80.722	Pongo_abelii
ENSCLAG00000007727	SALL3	100	86.347	ENSPCAG00000006522	SALL3	99	86.347	Procavia_capensis
ENSCLAG00000007727	SALL3	86	87.472	ENSPCOG00000012553	SALL3	96	87.823	Propithecus_coquereli
ENSCLAG00000007727	SALL3	99	70.570	ENSPVAG00000014645	SALL3	99	69.948	Pteropus_vampyrus
ENSCLAG00000007727	SALL3	73	68.980	ENSPNYG00000012783	sall3a	72	67.996	Pundamilia_nyererei
ENSCLAG00000007727	SALL3	78	59.040	ENSPNYG00000005353	sall3b	97	59.177	Pundamilia_nyererei
ENSCLAG00000007727	SALL3	100	51.475	ENSPNAG00000017141	sall3b	73	55.602	Pygocentrus_nattereri
ENSCLAG00000007727	SALL3	92	90.775	ENSRNOG00000026116	Sall3	98	90.775	Rattus_norvegicus
ENSCLAG00000007727	SALL3	99	89.668	ENSRBIG00000036190	SALL3	76	89.668	Rhinopithecus_bieti
ENSCLAG00000007727	SALL3	91	89.299	ENSRROG00000034130	SALL3	98	89.299	Rhinopithecus_roxellana
ENSCLAG00000007727	SALL3	80	86.420	ENSSBOG00000023380	SALL3	100	87.131	Saimiri_boliviensis_boliviensis
ENSCLAG00000007727	SALL3	100	79.595	ENSSHAG00000015872	SALL3	97	78.751	Sarcophilus_harrisii
ENSCLAG00000007727	SALL3	99	64.060	ENSSFOG00015012223	sall3a	100	78.723	Scleropages_formosus
ENSCLAG00000007727	SALL3	99	59.937	ENSSFOG00015009159	SALL3	96	70.979	Scleropages_formosus
ENSCLAG00000007727	SALL3	72	59.040	ENSSMAG00000019762	sall3b	72	58.513	Scophthalmus_maximus
ENSCLAG00000007727	SALL3	99	61.908	ENSSMAG00000007674	sall3a	71	69.840	Scophthalmus_maximus
ENSCLAG00000007727	SALL3	78	60.576	ENSSDUG00000010584	sall3b	98	60.465	Seriola_dumerili
ENSCLAG00000007727	SALL3	99	64.088	ENSSDUG00000011099	sall3a	97	63.773	Seriola_dumerili
ENSCLAG00000007727	SALL3	99	63.773	ENSSLDG00000012706	sall3a	97	63.457	Seriola_lalandi_dorsalis
ENSCLAG00000007727	SALL3	99	53.030	ENSSLDG00000016800	sall3b	71	60.022	Seriola_lalandi_dorsalis
ENSCLAG00000007727	SALL3	76	57.901	ENSSPAG00000003172	sall3b	97	58.093	Stegastes_partitus
ENSCLAG00000007727	SALL3	78	74.194	ENSSPAG00000013114	sall3a	98	74.194	Stegastes_partitus
ENSCLAG00000007727	SALL3	99	84.871	ENSSSCG00000004858	SALL3	97	84.871	Sus_scrofa
ENSCLAG00000007727	SALL3	100	74.841	ENSTGUG00000006541	SALL3	74	82.403	Taeniopygia_guttata
ENSCLAG00000007727	SALL3	77	79.070	ENSTRUG00000017423	sall3a	99	79.070	Takifugu_rubripes
ENSCLAG00000007727	SALL3	88	61.538	ENSTNIG00000001257	sall3a	66	65.242	Tetraodon_nigroviridis
ENSCLAG00000007727	SALL3	91	74.691	ENSTBEG00000008964	SALL3	79	73.347	Tupaia_belangeri
ENSCLAG00000007727	SALL3	81	79.054	ENSTTRG00000004958	SALL3	90	82.467	Tursiops_truncatus
ENSCLAG00000007727	SALL3	99	91.440	ENSUAMG00000016908	SALL3	96	91.440	Ursus_americanus
ENSCLAG00000007727	SALL3	84	89.286	ENSVVUG00000018838	SALL3	100	90.625	Vulpes_vulpes
ENSCLAG00000007727	SALL3	99	72.632	ENSXETG00000000845	sall3	73	78.896	Xenopus_tropicalis
ENSCLAG00000007727	SALL3	78	49.437	ENSXCOG00000018799	sall3b	92	62.963	Xiphophorus_couchianus
ENSCLAG00000007727	SALL3	73	76.562	ENSXCOG00000016907	sall3a	67	76.562	Xiphophorus_couchianus
ENSCLAG00000007727	SALL3	89	58.333	ENSXMAG00000000798	sall3b	97	49.055	Xiphophorus_maculatus
ENSCLAG00000007727	SALL3	73	68.636	ENSXMAG00000023447	sall3a	70	68.058	Xiphophorus_maculatus