EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000007734 (Gene tree)
Gene ID: 102026440
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 31056 bases
Position: chrJH721955.1:3743858-3774913
Accession: 102026440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000011193	RRM_5	PF13893.6	1.6e-06	1	1
ENSCLAP00000011193	RRM_1	PF00076.22	2.6e-13	1	1
ENSCLAP00000011193	SAP	PF02037.27	8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000011329	SAFB-201	2805	XM_005405765	ENSCLAP00000011193	934 (aa)	XP_005405822	-

Gene Model

Click here to download ENSCLAG00000007734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000007734's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000007734	SAFB	100	89.872	ENSG00000160633	SAFB	100	88.486	Homo_sapiens
ENSCLAG00000007734	SAFB	100	88.179	ENSAMEG00000012254	SAFB	100	86.581	Ailuropoda_melanoleuca
ENSCLAG00000007734	SAFB	94	42.040	ENSACIG00000006247	safb	70	43.360	Amphilophus_citrinellus
ENSCLAG00000007734	SAFB	90	63.626	ENSAPLG00000006355	-	99	63.626	Anas_platyrhynchos
ENSCLAG00000007734	SAFB	94	63.134	ENSAPLG00000005780	-	100	64.972	Anas_platyrhynchos
ENSCLAG00000007734	SAFB	100	88.794	ENSANAG00000028821	SAFB	100	88.047	Aotus_nancymaae
ENSCLAG00000007734	SAFB	91	44.710	ENSAMXG00000018154	safb	63	42.504	Astyanax_mexicanus
ENSCLAG00000007734	SAFB	100	85.592	ENSBTAG00000007875	SAFB	100	83.885	Bos_taurus
ENSCLAG00000007734	SAFB	94	95.283	ENSCJAG00000017081	SAFB	100	95.283	Callithrix_jacchus
ENSCLAG00000007734	SAFB	100	89.434	ENSCAFG00000018803	SAFB	87	88.687	Canis_familiaris
ENSCLAG00000007734	SAFB	100	89.434	ENSCAFG00020018943	SAFB	100	88.687	Canis_lupus_dingo
ENSCLAG00000007734	SAFB	100	84.632	ENSCHIG00000007262	SAFB	98	91.981	Capra_hircus
ENSCLAG00000007734	SAFB	57	75.701	ENSTSYG00000001851	-	53	88.519	Carlito_syrichta
ENSCLAG00000007734	SAFB	100	94.043	ENSCPOG00000026322	SAFB	100	92.553	Cavia_porcellus
ENSCLAG00000007734	SAFB	100	89.339	ENSCCAG00000020193	SAFB	100	88.593	Cebus_capucinus
ENSCLAG00000007734	SAFB	100	89.114	ENSCATG00000029994	SAFB	100	88.367	Cercocebus_atys
ENSCLAG00000007734	SAFB	100	89.007	ENSCSAG00000009949	SAFB	100	88.260	Chlorocebus_sabaeus
ENSCLAG00000007734	SAFB	87	95.238	ENSCHOG00000003208	SAFB	93	95.238	Choloepus_hoffmanni
ENSCLAG00000007734	SAFB	91	63.341	ENSCPBG00000010928	-	99	64.269	Chrysemys_picta_bellii
ENSCLAG00000007734	SAFB	91	59.978	ENSCPBG00000010936	-	99	60.310	Chrysemys_picta_bellii
ENSCLAG00000007734	SAFB	95	92.537	ENSCANG00000004774	-	99	92.537	Colobus_angolensis_palliatus
ENSCLAG00000007734	SAFB	100	83.991	ENSCANG00000019754	-	100	82.391	Colobus_angolensis_palliatus
ENSCLAG00000007734	SAFB	100	85.381	ENSCGRG00001002254	Safb	100	84.110	Cricetulus_griseus_chok1gshd
ENSCLAG00000007734	SAFB	90	83.257	ENSCGRG00000011529	Safb	96	83.144	Cricetulus_griseus_crigri
ENSCLAG00000007734	SAFB	94	40.636	ENSCSEG00000019870	safb	65	38.843	Cynoglossus_semilaevis
ENSCLAG00000007734	SAFB	90	44.124	ENSDARG00000020467	safb	60	60.000	Danio_rerio
ENSCLAG00000007734	SAFB	100	87.633	ENSDNOG00000015746	SAFB	95	85.778	Dasypus_novemcinctus
ENSCLAG00000007734	SAFB	100	83.581	ENSDORG00000016200	Safb	100	86.364	Dipodomys_ordii
ENSCLAG00000007734	SAFB	80	82.857	ENSETEG00000018679	SAFB	85	82.857	Echinops_telfairi
ENSCLAG00000007734	SAFB	100	85.122	ENSEASG00005023019	SAFB	100	85.547	Equus_asinus_asinus
ENSCLAG00000007734	SAFB	100	86.766	ENSECAG00000018659	SAFB	89	86.019	Equus_caballus
ENSCLAG00000007734	SAFB	96	44.433	ENSELUG00000022327	safb	67	50.233	Esox_lucius
ENSCLAG00000007734	SAFB	100	89.637	ENSFCAG00000011835	SAFB	100	88.889	Felis_catus
ENSCLAG00000007734	SAFB	91	59.000	ENSFALG00000013881	-	99	60.576	Ficedula_albicollis
ENSCLAG00000007734	SAFB	100	63.713	ENSFALG00000013882	-	92	64.127	Ficedula_albicollis
ENSCLAG00000007734	SAFB	95	90.558	ENSFDAG00000020306	SAFB	99	97.297	Fukomys_damarensis
ENSCLAG00000007734	SAFB	100	63.877	ENSGALG00000013365	-	100	64.089	Gallus_gallus
ENSCLAG00000007734	SAFB	100	60.671	ENSGALG00000001948	-	100	61.179	Gallus_gallus
ENSCLAG00000007734	SAFB	73	58.261	ENSGAGG00000017702	-	97	60.550	Gopherus_agassizii
ENSCLAG00000007734	SAFB	96	60.127	ENSGAGG00000008424	-	97	62.336	Gopherus_agassizii
ENSCLAG00000007734	SAFB	100	89.007	ENSGGOG00000015109	SAFB	100	88.260	Gorilla_gorilla
ENSCLAG00000007734	SAFB	100	97.859	ENSHGLG00000015883	SAFB	100	97.859	Heterocephalus_glaber_female
ENSCLAG00000007734	SAFB	100	80.831	ENSHGLG00100004228	SAFB	100	97.542	Heterocephalus_glaber_male
ENSCLAG00000007734	SAFB	91	38.331	ENSHCOG00000001705	safb	64	36.632	Hippocampus_comes
ENSCLAG00000007734	SAFB	97	45.931	ENSIPUG00000024869	safb2	63	45.277	Ictalurus_punctatus
ENSCLAG00000007734	SAFB	93	93.234	ENSSTOG00000002783	SAFB	100	92.317	Ictidomys_tridecemlineatus
ENSCLAG00000007734	SAFB	100	87.831	ENSJJAG00000009021	Safb	100	88.254	Jaculus_jaculus
ENSCLAG00000007734	SAFB	95	42.691	ENSLBEG00000006015	safb	63	41.626	Labrus_bergylta
ENSCLAG00000007734	SAFB	96	47.771	ENSLOCG00000003613	safb	74	44.901	Lepisosteus_oculatus
ENSCLAG00000007734	SAFB	99	86.924	ENSLAFG00000003840	SAFB	100	86.602	Loxodonta_africana
ENSCLAG00000007734	SAFB	100	89.126	ENSMFAG00000003885	SAFB	100	88.380	Macaca_fascicularis
ENSCLAG00000007734	SAFB	100	89.114	ENSMMUG00000017970	SAFB	100	88.367	Macaca_mulatta
ENSCLAG00000007734	SAFB	100	86.141	ENSMNEG00000035637	SAFB	100	85.075	Macaca_nemestrina
ENSCLAG00000007734	SAFB	100	84.272	ENSMLEG00000038637	SAFB	88	94.624	Mandrillus_leucophaeus
ENSCLAG00000007734	SAFB	90	44.131	ENSMZEG00005009120	safb	65	42.155	Maylandia_zebra
ENSCLAG00000007734	SAFB	89	59.529	ENSMGAG00000001051	-	100	59.670	Meleagris_gallopavo
ENSCLAG00000007734	SAFB	97	61.707	ENSMGAG00000001101	-	100	62.691	Meleagris_gallopavo
ENSCLAG00000007734	SAFB	52	89.528	ENSMAUG00000005013	Safb	100	90.965	Mesocricetus_auratus
ENSCLAG00000007734	SAFB	100	86.660	ENSMICG00000008739	-	100	86.126	Microcebus_murinus
ENSCLAG00000007734	SAFB	85	75.720	ENSMICG00000046795	-	98	93.617	Microcebus_murinus
ENSCLAG00000007734	SAFB	100	86.108	ENSMOCG00000014040	Safb	100	86.002	Microtus_ochrogaster
ENSCLAG00000007734	SAFB	100	71.055	ENSMODG00000001236	SAFB	100	70.324	Monodelphis_domestica
ENSCLAG00000007734	SAFB	93	43.730	ENSMALG00000020330	safb	68	40.650	Monopterus_albus
ENSCLAG00000007734	SAFB	100	85.987	MGP_CAROLIEiJ_G0021780	Safb	100	84.501	Mus_caroli
ENSCLAG00000007734	SAFB	100	85.987	ENSMUSG00000071054	Safb	100	84.501	Mus_musculus
ENSCLAG00000007734	SAFB	100	85.866	MGP_PahariEiJ_G0020769	Safb	100	84.378	Mus_pahari
ENSCLAG00000007734	SAFB	100	89.755	ENSMPUG00000006123	SAFB	94	88.367	Mustela_putorius_furo
ENSCLAG00000007734	SAFB	100	89.541	ENSMLUG00000001081	SAFB	100	87.834	Myotis_lucifugus
ENSCLAG00000007734	SAFB	100	84.607	ENSNGAG00000019882	Safb	100	83.121	Nannospalax_galili
ENSCLAG00000007734	SAFB	99	86.532	ENSNLEG00000013551	SAFB	100	88.320	Nomascus_leucogenys
ENSCLAG00000007734	SAFB	89	81.851	ENSOPRG00000011561	-	100	81.611	Ochotona_princeps
ENSCLAG00000007734	SAFB	100	98.503	ENSODEG00000014838	SAFB	100	98.503	Octodon_degus
ENSCLAG00000007734	SAFB	94	43.319	ENSONIG00000002318	safb	64	42.190	Oreochromis_niloticus
ENSCLAG00000007734	SAFB	90	80.896	ENSOCUG00000014628	SAFB	63	84.630	Oryctolagus_cuniculus
ENSCLAG00000007734	SAFB	94	40.883	ENSORLG00020000404	safb	66	38.625	Oryzias_latipes_hni
ENSCLAG00000007734	SAFB	100	84.591	ENSOGAG00000027769	SAFB	100	84.591	Otolemur_garnettii
ENSCLAG00000007734	SAFB	100	82.070	ENSOARG00000007662	-	100	81.217	Ovis_aries
ENSCLAG00000007734	SAFB	78	79.019	ENSOARG00000007856	-	100	79.019	Ovis_aries
ENSCLAG00000007734	SAFB	100	89.126	ENSPPAG00000035129	SAFB	100	88.380	Pan_paniscus
ENSCLAG00000007734	SAFB	100	89.637	ENSPPRG00000017197	SAFB	100	88.889	Panthera_pardus
ENSCLAG00000007734	SAFB	100	89.126	ENSPTRG00000010335	SAFB	100	88.380	Pan_troglodytes
ENSCLAG00000007734	SAFB	100	89.019	ENSPANG00000007770	SAFB	100	88.273	Papio_anubis
ENSCLAG00000007734	SAFB	95	44.351	ENSPKIG00000009902	safb	85	40.693	Paramormyrops_kingsleyae
ENSCLAG00000007734	SAFB	100	59.669	ENSPSIG00000011679	-	100	62.389	Pelodiscus_sinensis
ENSCLAG00000007734	SAFB	100	86.200	ENSPEMG00000020428	Safb	100	84.713	Peromyscus_maniculatus_bairdii
ENSCLAG00000007734	SAFB	57	77.122	ENSPCIG00000009504	-	100	75.646	Phascolarctos_cinereus
ENSCLAG00000007734	SAFB	88	41.287	ENSPFOG00000007745	safb	72	34.084	Poecilia_formosa
ENSCLAG00000007734	SAFB	94	40.567	ENSPLAG00000001614	safb	66	39.448	Poecilia_latipinna
ENSCLAG00000007734	SAFB	72	48.244	ENSPMEG00000021023	safb	53	52.174	Poecilia_mexicana
ENSCLAG00000007734	SAFB	76	47.150	ENSPREG00000012496	safb	56	49.141	Poecilia_reticulata
ENSCLAG00000007734	SAFB	100	89.221	ENSPPYG00000009428	SAFB	100	88.474	Pongo_abelii
ENSCLAG00000007734	SAFB	100	83.974	ENSPCAG00000006475	SAFB	100	82.158	Procavia_capensis
ENSCLAG00000007734	SAFB	100	82.340	ENSPCOG00000014090	SAFB	70	81.957	Propithecus_coquereli
ENSCLAG00000007734	SAFB	100	82.070	ENSPVAG00000004913	SAFB	100	80.896	Pteropus_vampyrus
ENSCLAG00000007734	SAFB	68	61.475	ENSPNAG00000021838	safb	64	43.269	Pygocentrus_nattereri
ENSCLAG00000007734	SAFB	100	86.214	ENSRNOG00000050543	Safb	100	84.836	Rattus_norvegicus
ENSCLAG00000007734	SAFB	96	82.270	ENSRBIG00000042509	SAFB	88	95.699	Rhinopithecus_bieti
ENSCLAG00000007734	SAFB	100	89.232	ENSRROG00000029278	SAFB	100	88.486	Rhinopithecus_roxellana
ENSCLAG00000007734	SAFB	100	89.328	ENSSBOG00000026291	SAFB	100	88.581	Saimiri_boliviensis_boliviensis
ENSCLAG00000007734	SAFB	96	46.203	ENSSFOG00015008156	safb	65	44.849	Scleropages_formosus
ENSCLAG00000007734	SAFB	96	42.553	ENSSMAG00000009316	safb	64	41.627	Scophthalmus_maximus
ENSCLAG00000007734	SAFB	93	81.943	ENSSARG00000010475	SAFB	100	80.686	Sorex_araneus
ENSCLAG00000007734	SAFB	89	57.177	ENSSPUG00000009747	-	99	56.679	Sphenodon_punctatus
ENSCLAG00000007734	SAFB	82	58.537	ENSSPUG00000009820	-	99	60.073	Sphenodon_punctatus
ENSCLAG00000007734	SAFB	100	88.397	ENSSSCG00000013522	SAFB	99	87.955	Sus_scrofa
ENSCLAG00000007734	SAFB	96	62.349	ENSTGUG00000000502	-	97	64.367	Taeniopygia_guttata
ENSCLAG00000007734	SAFB	93	62.458	ENSTGUG00000000489	-	97	63.636	Taeniopygia_guttata
ENSCLAG00000007734	SAFB	90	42.873	ENSTRUG00000003567	safb	64	41.789	Takifugu_rubripes
ENSCLAG00000007734	SAFB	88	44.787	ENSTNIG00000015470	safb	73	40.541	Tetraodon_nigroviridis
ENSCLAG00000007734	SAFB	75	83.459	ENSTBEG00000013124	-	74	75.940	Tupaia_belangeri
ENSCLAG00000007734	SAFB	92	98.413	ENSTTRG00000013588	SAFB	92	98.413	Tursiops_truncatus
ENSCLAG00000007734	SAFB	79	86.003	ENSUAMG00000024543	SAFB	100	80.524	Ursus_americanus
ENSCLAG00000007734	SAFB	89	87.599	ENSUMAG00000009734	SAFB	96	87.639	Ursus_maritimus
ENSCLAG00000007734	SAFB	78	78.537	ENSVPAG00000012043	SAFB	79	93.077	Vicugna_pacos
ENSCLAG00000007734	SAFB	100	89.328	ENSVVUG00000013720	SAFB	87	88.581	Vulpes_vulpes
ENSCLAG00000007734	SAFB	66	49.359	ENSXETG00000008755	safb	97	52.023	Xenopus_tropicalis
ENSCLAG00000007734	SAFB	77	45.937	ENSXMAG00000003458	safb	55	49.141	Xiphophorus_maculatus