EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000007893 (Gene tree)
Gene ID: 102010435
Gene Symbol: LARP6
Alias: FLJ11196|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 23323 bases
Position: chrJH721910.1:6050057-6073379
Accession: 102010435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000011443	La	PF05383.17	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000011580	LARP6-201	5428	XM_005393640	ENSCLAP00000011443	493 (aa)	XP_005393697	UPI00038F11A8

Gene Model

Click here to download ENSCLAG00000007893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000007893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000007893	LARP6	100	92.292	ENSG00000166173	LARP6	100	93.548	Homo_sapiens
ENSCLAG00000007893	LARP6	95	56.790	ENSAPOG00000021773	larp6a	67	56.790	Acanthochromis_polyacanthus
ENSCLAG00000007893	LARP6	87	91.355	ENSAMEG00000008897	LARP6	100	91.355	Ailuropoda_melanoleuca
ENSCLAG00000007893	LARP6	97	57.085	ENSACIG00000005166	larp6a	93	56.680	Amphilophus_citrinellus
ENSCLAG00000007893	LARP6	95	56.790	ENSAOCG00000002284	larp6a	67	56.790	Amphiprion_ocellaris
ENSCLAG00000007893	LARP6	95	56.790	ENSAPEG00000008077	larp6a	90	56.790	Amphiprion_percula
ENSCLAG00000007893	LARP6	95	56.379	ENSATEG00000004018	larp6a	66	56.173	Anabas_testudineus
ENSCLAG00000007893	LARP6	85	71.631	ENSAPLG00000009914	LARP6	99	71.631	Anas_platyrhynchos
ENSCLAG00000007893	LARP6	84	67.788	ENSACAG00000008613	LARP6	98	67.788	Anolis_carolinensis
ENSCLAG00000007893	LARP6	100	92.495	ENSANAG00000024860	LARP6	100	92.495	Aotus_nancymaae
ENSCLAG00000007893	LARP6	97	56.883	ENSACLG00000018561	larp6a	63	58.099	Astatotilapia_calliptera
ENSCLAG00000007893	LARP6	85	40.647	ENSAMXG00000036816	-	93	40.678	Astyanax_mexicanus
ENSCLAG00000007893	LARP6	89	56.522	ENSAMXG00000029387	larp6a	68	57.112	Astyanax_mexicanus
ENSCLAG00000007893	LARP6	100	90.467	ENSBTAG00000003915	LARP6	100	90.467	Bos_taurus
ENSCLAG00000007893	LARP6	100	92.698	ENSCJAG00000018642	-	100	92.698	Callithrix_jacchus
ENSCLAG00000007893	LARP6	100	92.292	ENSCJAG00000046236	-	100	92.292	Callithrix_jacchus
ENSCLAG00000007893	LARP6	86	93.381	ENSCAFG00000017616	LARP6	99	93.381	Canis_familiaris
ENSCLAG00000007893	LARP6	100	89.655	ENSCAFG00020007296	LARP6	100	90.467	Canis_lupus_dingo
ENSCLAG00000007893	LARP6	100	90.467	ENSCHIG00000013742	LARP6	100	90.467	Capra_hircus
ENSCLAG00000007893	LARP6	86	93.381	ENSTSYG00000028124	LARP6	86	93.381	Carlito_syrichta
ENSCLAG00000007893	LARP6	86	95.059	ENSCAPG00000015452	LARP6	100	95.059	Cavia_aperea
ENSCLAG00000007893	LARP6	100	94.726	ENSCPOG00000022687	LARP6	100	94.726	Cavia_porcellus
ENSCLAG00000007893	LARP6	100	92.292	ENSCCAG00000036320	LARP6	100	92.292	Cebus_capucinus
ENSCLAG00000007893	LARP6	100	92.292	ENSCATG00000042432	LARP6	100	92.292	Cercocebus_atys
ENSCLAG00000007893	LARP6	100	92.698	ENSCSAG00000013672	LARP6	100	92.698	Chlorocebus_sabaeus
ENSCLAG00000007893	LARP6	97	91.632	ENSCHOG00000003318	LARP6	100	91.632	Choloepus_hoffmanni
ENSCLAG00000007893	LARP6	89	70.938	ENSCPBG00000010771	LARP6	84	70.938	Chrysemys_picta_bellii
ENSCLAG00000007893	LARP6	86	94.340	ENSCANG00000025833	LARP6	99	94.340	Colobus_angolensis_palliatus
ENSCLAG00000007893	LARP6	100	89.655	ENSCGRG00001024472	Larp6	100	89.655	Cricetulus_griseus_chok1gshd
ENSCLAG00000007893	LARP6	100	89.655	ENSCGRG00000004527	Larp6	100	89.655	Cricetulus_griseus_crigri
ENSCLAG00000007893	LARP6	95	56.701	ENSCSEG00000011196	larp6a	65	58.784	Cynoglossus_semilaevis
ENSCLAG00000007893	LARP6	88	58.590	ENSCVAG00000009605	larp6a	66	58.590	Cyprinodon_variegatus
ENSCLAG00000007893	LARP6	87	57.366	ENSDARG00000005355	larp6a	96	60.520	Danio_rerio
ENSCLAG00000007893	LARP6	100	90.872	ENSDNOG00000042993	LARP6	100	91.075	Dasypus_novemcinctus
ENSCLAG00000007893	LARP6	100	80.808	ENSDORG00000023910	Larp6	100	80.404	Dipodomys_ordii
ENSCLAG00000007893	LARP6	79	91.200	ENSETEG00000020390	LARP6	78	87.452	Echinops_telfairi
ENSCLAG00000007893	LARP6	100	92.698	ENSEASG00005005490	LARP6	73	92.698	Equus_asinus_asinus
ENSCLAG00000007893	LARP6	100	92.495	ENSECAG00000014190	LARP6	100	92.495	Equus_caballus
ENSCLAG00000007893	LARP6	88	57.205	ENSELUG00000007341	larp6a	66	56.769	Esox_lucius
ENSCLAG00000007893	LARP6	100	91.075	ENSFCAG00000001361	LARP6	100	91.075	Felis_catus
ENSCLAG00000007893	LARP6	88	69.545	ENSFALG00000012389	LARP6	99	66.250	Ficedula_albicollis
ENSCLAG00000007893	LARP6	89	94.773	ENSFDAG00000019994	LARP6	86	94.773	Fukomys_damarensis
ENSCLAG00000007893	LARP6	97	56.364	ENSFHEG00000010312	larp6a	64	58.370	Fundulus_heteroclitus
ENSCLAG00000007893	LARP6	89	70.295	ENSGALG00000004046	LARP6	94	67.364	Gallus_gallus
ENSCLAG00000007893	LARP6	97	56.364	ENSGAFG00000009426	larp6a	66	58.590	Gambusia_affinis
ENSCLAG00000007893	LARP6	85	58.810	ENSGACG00000014622	larp6a	97	58.810	Gasterosteus_aculeatus
ENSCLAG00000007893	LARP6	88	67.667	ENSGAGG00000010802	LARP6	62	67.667	Gopherus_agassizii
ENSCLAG00000007893	LARP6	86	94.340	ENSGGOG00000024151	LARP6	99	94.340	Gorilla_gorilla
ENSCLAG00000007893	LARP6	97	56.883	ENSHBUG00000021014	larp6a	63	58.099	Haplochromis_burtoni
ENSCLAG00000007893	LARP6	100	95.152	ENSHGLG00000015112	LARP6	100	95.152	Heterocephalus_glaber_female
ENSCLAG00000007893	LARP6	86	96.927	ENSHGLG00100013159	LARP6	99	96.927	Heterocephalus_glaber_male
ENSCLAG00000007893	LARP6	97	55.400	ENSHCOG00000001241	larp6a	92	55.400	Hippocampus_comes
ENSCLAG00000007893	LARP6	86	58.202	ENSIPUG00000010187	larp6	65	59.122	Ictalurus_punctatus
ENSCLAG00000007893	LARP6	85	38.915	ENSIPUG00000002828	-	97	36.306	Ictalurus_punctatus
ENSCLAG00000007893	LARP6	94	93.926	ENSSTOG00000024279	LARP6	99	94.079	Ictidomys_tridecemlineatus
ENSCLAG00000007893	LARP6	100	87.830	ENSJJAG00000011013	Larp6	100	88.032	Jaculus_jaculus
ENSCLAG00000007893	LARP6	88	58.991	ENSKMAG00000001702	larp6a	61	58.991	Kryptolebias_marmoratus
ENSCLAG00000007893	LARP6	95	54.508	ENSLBEG00000000170	larp6a	84	56.600	Labrus_bergylta
ENSCLAG00000007893	LARP6	85	40.233	ENSLACG00000002786	-	98	43.560	Latimeria_chalumnae
ENSCLAG00000007893	LARP6	96	64.644	ENSLACG00000018706	LARP6	89	63.598	Latimeria_chalumnae
ENSCLAG00000007893	LARP6	95	58.299	ENSLOCG00000014592	larp6a	65	61.086	Lepisosteus_oculatus
ENSCLAG00000007893	LARP6	84	44.366	ENSLOCG00000008547	-	82	41.784	Lepisosteus_oculatus
ENSCLAG00000007893	LARP6	91	93.512	ENSLAFG00000016343	LARP6	100	93.512	Loxodonta_africana
ENSCLAG00000007893	LARP6	91	94.222	ENSMFAG00000035507	LARP6	100	94.222	Macaca_fascicularis
ENSCLAG00000007893	LARP6	100	90.467	ENSMMUG00000004429	LARP6	100	90.669	Macaca_mulatta
ENSCLAG00000007893	LARP6	100	92.495	ENSMNEG00000045335	LARP6	100	92.495	Macaca_nemestrina
ENSCLAG00000007893	LARP6	86	94.340	ENSMLEG00000038587	LARP6	99	94.340	Mandrillus_leucophaeus
ENSCLAG00000007893	LARP6	95	56.557	ENSMAMG00000005261	larp6a	67	56.352	Mastacembelus_armatus
ENSCLAG00000007893	LARP6	97	56.883	ENSMZEG00005005774	larp6a	63	58.099	Maylandia_zebra
ENSCLAG00000007893	LARP6	85	71.090	ENSMGAG00000005077	LARP6	99	71.090	Meleagris_gallopavo
ENSCLAG00000007893	LARP6	100	89.452	ENSMAUG00000018486	Larp6	100	89.452	Mesocricetus_auratus
ENSCLAG00000007893	LARP6	100	90.264	ENSMICG00000011234	LARP6	100	90.264	Microcebus_murinus
ENSCLAG00000007893	LARP6	100	89.249	ENSMOCG00000010492	Larp6	99	89.733	Microtus_ochrogaster
ENSCLAG00000007893	LARP6	95	57.113	ENSMMOG00000016284	larp6a	91	57.113	Mola_mola
ENSCLAG00000007893	LARP6	99	75.152	ENSMODG00000009034	LARP6	96	75.354	Monodelphis_domestica
ENSCLAG00000007893	LARP6	95	56.762	ENSMALG00000014439	larp6a	84	58.837	Monopterus_albus
ENSCLAG00000007893	LARP6	99	91.170	MGP_CAROLIEiJ_G0032314	Larp6	99	91.170	Mus_caroli
ENSCLAG00000007893	LARP6	100	91.278	ENSMUSG00000034839	Larp6	100	91.278	Mus_musculus
ENSCLAG00000007893	LARP6	100	89.858	MGP_PahariEiJ_G0015180	Larp6	100	89.858	Mus_pahari
ENSCLAG00000007893	LARP6	100	90.669	MGP_SPRETEiJ_G0033452	Larp6	100	90.669	Mus_spretus
ENSCLAG00000007893	LARP6	87	91.121	ENSMPUG00000017086	LARP6	100	91.121	Mustela_putorius_furo
ENSCLAG00000007893	LARP6	100	91.886	ENSMLUG00000010319	LARP6	100	91.886	Myotis_lucifugus
ENSCLAG00000007893	LARP6	100	89.655	ENSNGAG00000014238	Larp6	100	89.655	Nannospalax_galili
ENSCLAG00000007893	LARP6	97	56.680	ENSNBRG00000008120	larp6a	87	57.883	Neolamprologus_brichardi
ENSCLAG00000007893	LARP6	100	91.886	ENSNLEG00000013691	LARP6	100	91.278	Nomascus_leucogenys
ENSCLAG00000007893	LARP6	86	75.410	ENSMEUG00000002270	LARP6	99	65.650	Notamacropus_eugenii
ENSCLAG00000007893	LARP6	71	78.063	ENSOPRG00000004868	-	99	78.063	Ochotona_princeps
ENSCLAG00000007893	LARP6	100	91.886	ENSODEG00000015958	LARP6	100	91.886	Octodon_degus
ENSCLAG00000007893	LARP6	97	56.855	ENSONIG00000002901	larp6a	87	57.692	Oreochromis_niloticus
ENSCLAG00000007893	LARP6	86	81.176	ENSOCUG00000009306	LARP6	100	81.176	Oryctolagus_cuniculus
ENSCLAG00000007893	LARP6	95	57.407	ENSORLG00000014256	larp6a	92	57.407	Oryzias_latipes
ENSCLAG00000007893	LARP6	95	57.407	ENSORLG00020019657	larp6a	67	57.407	Oryzias_latipes_hni
ENSCLAG00000007893	LARP6	95	57.202	ENSORLG00015017915	larp6a	67	57.202	Oryzias_latipes_hsok
ENSCLAG00000007893	LARP6	95	57.819	ENSOMEG00000017049	larp6a	68	57.819	Oryzias_melastigma
ENSCLAG00000007893	LARP6	100	90.467	ENSOGAG00000000522	LARP6	100	90.467	Otolemur_garnettii
ENSCLAG00000007893	LARP6	87	91.355	ENSOARG00000018750	LARP6	99	91.355	Ovis_aries
ENSCLAG00000007893	LARP6	86	94.340	ENSPPAG00000031247	LARP6	99	94.340	Pan_paniscus
ENSCLAG00000007893	LARP6	100	90.467	ENSPPRG00000011282	LARP6	100	90.467	Panthera_pardus
ENSCLAG00000007893	LARP6	86	92.217	ENSPTIG00000015318	LARP6	86	92.217	Panthera_tigris_altaica
ENSCLAG00000007893	LARP6	100	92.292	ENSPTRG00000007234	LARP6	100	92.292	Pan_troglodytes
ENSCLAG00000007893	LARP6	100	92.495	ENSPANG00000016362	LARP6	100	92.495	Papio_anubis
ENSCLAG00000007893	LARP6	95	57.292	ENSPKIG00000020103	larp6a	83	59.184	Paramormyrops_kingsleyae
ENSCLAG00000007893	LARP6	96	55.711	ENSPKIG00000004511	LARP6	67	57.609	Paramormyrops_kingsleyae
ENSCLAG00000007893	LARP6	62	81.731	ENSPSIG00000009071	LARP6	91	73.333	Pelodiscus_sinensis
ENSCLAG00000007893	LARP6	95	57.407	ENSPMGG00000006958	larp6a	92	56.996	Periophthalmus_magnuspinnatus
ENSCLAG00000007893	LARP6	100	89.655	ENSPEMG00000012909	Larp6	100	89.655	Peromyscus_maniculatus_bairdii
ENSCLAG00000007893	LARP6	99	75.960	ENSPCIG00000020765	LARP6	96	76.162	Phascolarctos_cinereus
ENSCLAG00000007893	LARP6	95	57.055	ENSPFOG00000014175	larp6a	86	58.606	Poecilia_formosa
ENSCLAG00000007893	LARP6	97	56.768	ENSPLAG00000011105	larp6a	64	59.031	Poecilia_latipinna
ENSCLAG00000007893	LARP6	97	56.768	ENSPMEG00000011085	larp6a	64	59.031	Poecilia_mexicana
ENSCLAG00000007893	LARP6	97	57.172	ENSPREG00000008067	larp6a	64	58.811	Poecilia_reticulata
ENSCLAG00000007893	LARP6	100	92.292	ENSPPYG00000006604	LARP6	100	92.292	Pongo_abelii
ENSCLAG00000007893	LARP6	65	94.012	ENSPCAG00000014197	LARP6	76	94.012	Procavia_capensis
ENSCLAG00000007893	LARP6	100	90.872	ENSPCOG00000022934	LARP6	100	90.872	Propithecus_coquereli
ENSCLAG00000007893	LARP6	100	92.292	ENSPVAG00000005618	LARP6	100	92.292	Pteropus_vampyrus
ENSCLAG00000007893	LARP6	97	56.855	ENSPNYG00000009835	larp6a	91	56.048	Pundamilia_nyererei
ENSCLAG00000007893	LARP6	89	56.455	ENSPNAG00000017966	larp6a	73	57.112	Pygocentrus_nattereri
ENSCLAG00000007893	LARP6	100	89.655	ENSRNOG00000012438	Larp6	100	89.655	Rattus_norvegicus
ENSCLAG00000007893	LARP6	98	90.309	ENSRBIG00000032902	LARP6	98	90.309	Rhinopithecus_bieti
ENSCLAG00000007893	LARP6	99	92.245	ENSRROG00000043074	LARP6	99	92.784	Rhinopithecus_roxellana
ENSCLAG00000007893	LARP6	86	94.340	ENSSBOG00000024190	LARP6	99	94.340	Saimiri_boliviensis_boliviensis
ENSCLAG00000007893	LARP6	87	75.935	ENSSHAG00000018495	LARP6	100	75.935	Sarcophilus_harrisii
ENSCLAG00000007893	LARP6	95	51.464	ENSSFOG00015002254	LARP6	83	54.691	Scleropages_formosus
ENSCLAG00000007893	LARP6	86	60.092	ENSSFOG00015023268	larp6a	84	60.829	Scleropages_formosus
ENSCLAG00000007893	LARP6	97	56.048	ENSSMAG00000009953	larp6a	63	57.582	Scophthalmus_maximus
ENSCLAG00000007893	LARP6	95	56.967	ENSSDUG00000007438	larp6a	62	58.613	Seriola_dumerili
ENSCLAG00000007893	LARP6	95	56.967	ENSSLDG00000016647	larp6a	62	59.060	Seriola_lalandi_dorsalis
ENSCLAG00000007893	LARP6	86	71.327	ENSSPUG00000011312	LARP6	99	71.327	Sphenodon_punctatus
ENSCLAG00000007893	LARP6	95	56.790	ENSSPAG00000020502	larp6a	67	56.790	Stegastes_partitus
ENSCLAG00000007893	LARP6	100	90.872	ENSSSCG00000004974	LARP6	100	90.872	Sus_scrofa
ENSCLAG00000007893	LARP6	85	70.616	ENSTGUG00000005808	LARP6	99	70.616	Taeniopygia_guttata
ENSCLAG00000007893	LARP6	96	56.250	ENSTRUG00000003151	larp6a	70	56.162	Takifugu_rubripes
ENSCLAG00000007893	LARP6	95	55.925	ENSTNIG00000011926	larp6a	88	57.692	Tetraodon_nigroviridis
ENSCLAG00000007893	LARP6	86	91.962	ENSTBEG00000015077	LARP6	99	91.962	Tupaia_belangeri
ENSCLAG00000007893	LARP6	92	86.504	ENSUAMG00000010467	LARP6	89	86.504	Ursus_americanus
ENSCLAG00000007893	LARP6	91	89.579	ENSVVUG00000015227	LARP6	99	89.579	Vulpes_vulpes
ENSCLAG00000007893	LARP6	97	66.736	ENSXETG00000020340	larp6	93	66.946	Xenopus_tropicalis
ENSCLAG00000007893	LARP6	95	56.879	ENSXCOG00000012654	larp6a	91	58.425	Xiphophorus_couchianus
ENSCLAG00000007893	LARP6	97	56.566	ENSXMAG00000021015	larp6a	61	58.811	Xiphophorus_maculatus