EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000007917 (Gene tree)
Gene ID: 102015297
Gene Symbol: TRA2A
Alias: AWMS1|htra-2-alpha|tra2a
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 24480 bases
Position: chrJH721870.1:25759649-25784128
Accession: 102015297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000011483	RRM_1	PF00076.22	1.4e-19	1	1
ENSCLAP00000011484	RRM_1	PF00076.22	1.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000011620	TRA2A-201	2110	XM_005377400	ENSCLAP00000011483	282 (aa)	XP_005377457	UPI00001372AB
ENSCLAT00000011621	TRA2A-202	858	-	ENSCLAP00000011484	285 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000007917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000007917's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000007917	TRA2A	60	37.097	ENSCLAG00000005476	ELAVL4	70	35.821
ENSCLAG00000007917	TRA2A	60	65.957	ENSCLAG00000015607	TRA2B	92	56.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000007917	TRA2A	100	100.000	ENSG00000164548	TRA2A	100	100.000	Homo_sapiens
ENSCLAG00000007917	TRA2A	90	75.277	ENSAPOG00000017425	tra2a	90	75.277	Acanthochromis_polyacanthus
ENSCLAG00000007917	TRA2A	95	97.786	ENSAMEG00000003501	TRA2A	84	97.786	Ailuropoda_melanoleuca
ENSCLAG00000007917	TRA2A	54	87.500	ENSACIG00000001333	tra2a	79	87.500	Amphilophus_citrinellus
ENSCLAG00000007917	TRA2A	90	76.015	ENSAOCG00000015445	tra2a	90	76.015	Amphiprion_ocellaris
ENSCLAG00000007917	TRA2A	90	76.015	ENSAPEG00000018557	tra2a	90	76.015	Amphiprion_percula
ENSCLAG00000007917	TRA2A	90	77.491	ENSATEG00000000671	tra2a	90	77.491	Anabas_testudineus
ENSCLAG00000007917	TRA2A	95	94.052	ENSAPLG00000013689	TRA2A	100	94.052	Anas_platyrhynchos
ENSCLAG00000007917	TRA2A	100	95.423	ENSACAG00000013502	TRA2A	100	95.423	Anolis_carolinensis
ENSCLAG00000007917	TRA2A	90	78.967	ENSACLG00000024845	tra2a	90	78.967	Astatotilapia_calliptera
ENSCLAG00000007917	TRA2A	60	89.595	ENSAMXG00000005553	tra2a	98	82.591	Astyanax_mexicanus
ENSCLAG00000007917	TRA2A	100	99.645	ENSBTAG00000012622	TRA2A	100	99.645	Bos_taurus
ENSCLAG00000007917	TRA2A	94	98.106	ENSCJAG00000045802	-	100	98.106	Callithrix_jacchus
ENSCLAG00000007917	TRA2A	100	100.000	ENSCJAG00000001509	-	100	100.000	Callithrix_jacchus
ENSCLAG00000007917	TRA2A	99	99.642	ENSCAFG00000002788	TRA2A	100	99.642	Canis_familiaris
ENSCLAG00000007917	TRA2A	90	98.819	ENSCAFG00020002745	TRA2A	95	98.819	Canis_lupus_dingo
ENSCLAG00000007917	TRA2A	100	100.000	ENSTSYG00000000388	TRA2A	100	100.000	Carlito_syrichta
ENSCLAG00000007917	TRA2A	86	86.364	ENSCAPG00000017377	TRA2A	87	86.722	Cavia_aperea
ENSCLAG00000007917	TRA2A	100	100.000	ENSCPOG00000010739	TRA2A	100	100.000	Cavia_porcellus
ENSCLAG00000007917	TRA2A	100	100.000	ENSCCAG00000019576	TRA2A	100	100.000	Cebus_capucinus
ENSCLAG00000007917	TRA2A	100	100.000	ENSCATG00000041219	TRA2A	100	100.000	Cercocebus_atys
ENSCLAG00000007917	TRA2A	99	100.000	ENSCSAG00000014051	TRA2A	99	100.000	Chlorocebus_sabaeus
ENSCLAG00000007917	TRA2A	100	99.645	ENSCHOG00000001130	TRA2A	100	99.645	Choloepus_hoffmanni
ENSCLAG00000007917	TRA2A	100	96.479	ENSCPBG00000022466	TRA2A	100	96.479	Chrysemys_picta_bellii
ENSCLAG00000007917	TRA2A	100	100.000	ENSCANG00000031292	TRA2A	100	100.000	Colobus_angolensis_palliatus
ENSCLAG00000007917	TRA2A	100	98.592	ENSCGRG00001019980	Tra2a	100	98.592	Cricetulus_griseus_chok1gshd
ENSCLAG00000007917	TRA2A	96	98.529	ENSCGRG00000006087	Tra2a	100	98.529	Cricetulus_griseus_crigri
ENSCLAG00000007917	TRA2A	90	71.062	ENSCSEG00000012193	tra2a	90	71.795	Cynoglossus_semilaevis
ENSCLAG00000007917	TRA2A	57	81.988	ENSDARG00000007863	tra2a	90	76.471	Danio_rerio
ENSCLAG00000007917	TRA2A	100	99.645	ENSDNOG00000039446	TRA2A	100	99.645	Dasypus_novemcinctus
ENSCLAG00000007917	TRA2A	100	99.291	ENSDORG00000009361	Tra2a	100	99.291	Dipodomys_ordii
ENSCLAG00000007917	TRA2A	100	82.230	ENSETEG00000007250	TRA2A	100	82.230	Echinops_telfairi
ENSCLAG00000007917	TRA2A	100	99.645	ENSEASG00005022002	TRA2A	100	99.645	Equus_asinus_asinus
ENSCLAG00000007917	TRA2A	100	99.645	ENSECAG00000011508	TRA2A	100	99.645	Equus_caballus
ENSCLAG00000007917	TRA2A	100	98.936	ENSEEUG00000015674	TRA2A	100	98.936	Erinaceus_europaeus
ENSCLAG00000007917	TRA2A	76	74.576	ENSELUG00000005846	tra2a	91	69.360	Esox_lucius
ENSCLAG00000007917	TRA2A	100	99.645	ENSFCAG00000005361	TRA2A	100	99.645	Felis_catus
ENSCLAG00000007917	TRA2A	96	94.815	ENSFALG00000009605	TRA2A	100	94.815	Ficedula_albicollis
ENSCLAG00000007917	TRA2A	100	99.293	ENSFDAG00000004949	TRA2A	100	99.293	Fukomys_damarensis
ENSCLAG00000007917	TRA2A	90	69.675	ENSGMOG00000013740	tra2a	91	69.675	Gadus_morhua
ENSCLAG00000007917	TRA2A	100	94.366	ENSGALG00000010973	TRA2A	100	94.366	Gallus_gallus
ENSCLAG00000007917	TRA2A	90	75.194	ENSGACG00000006878	tra2a	89	75.581	Gasterosteus_aculeatus
ENSCLAG00000007917	TRA2A	100	95.775	ENSGAGG00000005793	TRA2A	100	95.775	Gopherus_agassizii
ENSCLAG00000007917	TRA2A	100	100.000	ENSGGOG00000009053	TRA2A	100	100.000	Gorilla_gorilla
ENSCLAG00000007917	TRA2A	90	79.705	ENSHBUG00000018234	tra2a	90	79.705	Haplochromis_burtoni
ENSCLAG00000007917	TRA2A	100	100.000	ENSHGLG00000012168	TRA2A	100	100.000	Heterocephalus_glaber_female
ENSCLAG00000007917	TRA2A	100	100.000	ENSHGLG00100014577	TRA2A	100	100.000	Heterocephalus_glaber_male
ENSCLAG00000007917	TRA2A	64	64.921	ENSHCOG00000006314	tra2a	86	63.277	Hippocampus_comes
ENSCLAG00000007917	TRA2A	62	61.979	ENSHCOG00000006320	tra2a	95	62.304	Hippocampus_comes
ENSCLAG00000007917	TRA2A	100	100.000	ENSSTOG00000012073	TRA2A	100	100.000	Ictidomys_tridecemlineatus
ENSCLAG00000007917	TRA2A	100	99.291	ENSJJAG00000022787	Tra2a	100	99.291	Jaculus_jaculus
ENSCLAG00000007917	TRA2A	85	75.479	ENSLBEG00000005297	tra2a	88	75.479	Labrus_bergylta
ENSCLAG00000007917	TRA2A	90	88.189	ENSLACG00000014765	TRA2A	90	88.189	Latimeria_chalumnae
ENSCLAG00000007917	TRA2A	90	77.491	ENSLOCG00000011615	-	90	77.491	Lepisosteus_oculatus
ENSCLAG00000007917	TRA2A	100	99.647	ENSLAFG00000006598	TRA2A	100	99.647	Loxodonta_africana
ENSCLAG00000007917	TRA2A	100	100.000	ENSMFAG00000043211	TRA2A	100	100.000	Macaca_fascicularis
ENSCLAG00000007917	TRA2A	100	100.000	ENSMMUG00000006286	TRA2A	100	100.000	Macaca_mulatta
ENSCLAG00000007917	TRA2A	100	100.000	ENSMNEG00000040670	TRA2A	100	100.000	Macaca_nemestrina
ENSCLAG00000007917	TRA2A	100	100.000	ENSMLEG00000032154	TRA2A	100	100.000	Mandrillus_leucophaeus
ENSCLAG00000007917	TRA2A	76	80.687	ENSMAMG00000008575	tra2a	90	81.034	Mastacembelus_armatus
ENSCLAG00000007917	TRA2A	90	78.967	ENSMZEG00005009142	tra2a	90	78.967	Maylandia_zebra
ENSCLAG00000007917	TRA2A	96	94.118	ENSMGAG00000010514	TRA2A	100	94.118	Meleagris_gallopavo
ENSCLAG00000007917	TRA2A	100	99.645	ENSMICG00000043639	-	100	100.000	Microcebus_murinus
ENSCLAG00000007917	TRA2A	100	77.305	ENSMICG00000036849	-	88	76.680	Microcebus_murinus
ENSCLAG00000007917	TRA2A	63	90.960	ENSMOCG00000010249	-	63	90.419	Microtus_ochrogaster
ENSCLAG00000007917	TRA2A	71	82.587	ENSMOCG00000006467	-	97	81.592	Microtus_ochrogaster
ENSCLAG00000007917	TRA2A	87	79.675	ENSMMOG00000020174	tra2a	83	79.583	Mola_mola
ENSCLAG00000007917	TRA2A	100	98.227	ENSMODG00000000807	TRA2A	100	98.227	Monodelphis_domestica
ENSCLAG00000007917	TRA2A	85	77.308	ENSMALG00000020875	tra2a	90	76.277	Monopterus_albus
ENSCLAG00000007917	TRA2A	100	98.592	ENSMUSG00000029817	Tra2a	100	98.592	Mus_musculus
ENSCLAG00000007917	TRA2A	100	98.239	MGP_PahariEiJ_G0022115	Tra2a	100	98.239	Mus_pahari
ENSCLAG00000007917	TRA2A	100	98.592	MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	Mus_spretus
ENSCLAG00000007917	TRA2A	100	99.291	ENSMPUG00000013480	TRA2A	100	99.291	Mustela_putorius_furo
ENSCLAG00000007917	TRA2A	100	98.587	ENSMLUG00000013972	TRA2A	100	98.587	Myotis_lucifugus
ENSCLAG00000007917	TRA2A	100	98.582	ENSNGAG00000023805	Tra2a	100	98.582	Nannospalax_galili
ENSCLAG00000007917	TRA2A	54	89.542	ENSNBRG00000005992	tra2a	73	90.850	Neolamprologus_brichardi
ENSCLAG00000007917	TRA2A	64	70.718	ENSNLEG00000029659	-	88	76.316	Nomascus_leucogenys
ENSCLAG00000007917	TRA2A	100	100.000	ENSNLEG00000014794	TRA2A	100	100.000	Nomascus_leucogenys
ENSCLAG00000007917	TRA2A	100	97.880	ENSMEUG00000001202	TRA2A	100	97.880	Notamacropus_eugenii
ENSCLAG00000007917	TRA2A	100	98.582	ENSOPRG00000007606	TRA2A	100	98.582	Ochotona_princeps
ENSCLAG00000007917	TRA2A	100	100.000	ENSODEG00000008335	TRA2A	100	100.000	Octodon_degus
ENSCLAG00000007917	TRA2A	90	78.832	ENSONIG00000004503	tra2a	90	78.832	Oreochromis_niloticus
ENSCLAG00000007917	TRA2A	89	88.760	ENSOANG00000014202	TRA2A	90	87.984	Ornithorhynchus_anatinus
ENSCLAG00000007917	TRA2A	100	99.645	ENSOCUG00000024139	TRA2A	100	99.645	Oryctolagus_cuniculus
ENSCLAG00000007917	TRA2A	82	69.697	ENSORLG00000022191	tra2a	60	74.251	Oryzias_latipes
ENSCLAG00000007917	TRA2A	82	69.264	ENSORLG00020003490	tra2a	60	73.653	Oryzias_latipes_hni
ENSCLAG00000007917	TRA2A	82	68.831	ENSORLG00015015485	tra2a	60	73.054	Oryzias_latipes_hsok
ENSCLAG00000007917	TRA2A	82	67.965	ENSOMEG00000017864	tra2a	60	71.856	Oryzias_melastigma
ENSCLAG00000007917	TRA2A	99	97.143	ENSOGAG00000009733	TRA2A	99	97.143	Otolemur_garnettii
ENSCLAG00000007917	TRA2A	100	98.582	ENSOARG00000013147	TRA2A	100	98.582	Ovis_aries
ENSCLAG00000007917	TRA2A	90	87.891	ENSOARG00000002323	-	100	90.175	Ovis_aries
ENSCLAG00000007917	TRA2A	99	100.000	ENSPPAG00000034382	TRA2A	99	100.000	Pan_paniscus
ENSCLAG00000007917	TRA2A	100	99.645	ENSPPRG00000015216	TRA2A	100	99.645	Panthera_pardus
ENSCLAG00000007917	TRA2A	100	99.645	ENSPTIG00000021114	TRA2A	100	99.645	Panthera_tigris_altaica
ENSCLAG00000007917	TRA2A	100	100.000	ENSPTRG00000046098	-	100	100.000	Pan_troglodytes
ENSCLAG00000007917	TRA2A	100	100.000	ENSPTRG00000018988	TRA2A	100	100.000	Pan_troglodytes
ENSCLAG00000007917	TRA2A	100	100.000	ENSPANG00000014541	TRA2A	100	100.000	Papio_anubis
ENSCLAG00000007917	TRA2A	90	76.384	ENSPKIG00000012298	tra2a	90	75.646	Paramormyrops_kingsleyae
ENSCLAG00000007917	TRA2A	88	94.378	ENSPSIG00000014993	TRA2A	90	94.378	Pelodiscus_sinensis
ENSCLAG00000007917	TRA2A	100	98.940	ENSPEMG00000008564	-	100	98.940	Peromyscus_maniculatus_bairdii
ENSCLAG00000007917	TRA2A	63	69.663	ENSPMAG00000007947	tra2a	59	69.697	Petromyzon_marinus
ENSCLAG00000007917	TRA2A	100	98.227	ENSPCIG00000007917	TRA2A	100	98.227	Phascolarctos_cinereus
ENSCLAG00000007917	TRA2A	100	100.000	ENSPPYG00000017728	TRA2A	100	100.000	Pongo_abelii
ENSCLAG00000007917	TRA2A	99	98.929	ENSPCAG00000004148	TRA2A	100	98.929	Procavia_capensis
ENSCLAG00000007917	TRA2A	100	85.816	ENSPCOG00000020465	TRA2A	100	85.816	Propithecus_coquereli
ENSCLAG00000007917	TRA2A	100	99.293	ENSPVAG00000011298	TRA2A	100	99.293	Pteropus_vampyrus
ENSCLAG00000007917	TRA2A	54	87.821	ENSPNYG00000020134	tra2a	76	87.821	Pundamilia_nyererei
ENSCLAG00000007917	TRA2A	90	73.432	ENSPNAG00000000482	tra2a	90	71.218	Pygocentrus_nattereri
ENSCLAG00000007917	TRA2A	100	98.592	ENSRNOG00000009156	Tra2a	100	98.592	Rattus_norvegicus
ENSCLAG00000007917	TRA2A	100	99.645	ENSRROG00000030758	TRA2A	100	100.000	Rhinopithecus_roxellana
ENSCLAG00000007917	TRA2A	100	100.000	ENSSBOG00000031562	TRA2A	100	100.000	Saimiri_boliviensis_boliviensis
ENSCLAG00000007917	TRA2A	89	95.600	ENSSHAG00000005727	TRA2A	88	95.600	Sarcophilus_harrisii
ENSCLAG00000007917	TRA2A	90	80.237	ENSSFOG00015014004	tra2a	90	74.908	Scleropages_formosus
ENSCLAG00000007917	TRA2A	93	73.759	ENSSMAG00000014242	tra2a	90	73.432	Scophthalmus_maximus
ENSCLAG00000007917	TRA2A	90	83.594	ENSSDUG00000005610	tra2a	89	83.594	Seriola_dumerili
ENSCLAG00000007917	TRA2A	54	88.158	ENSSLDG00000025577	tra2a	81	88.158	Seriola_lalandi_dorsalis
ENSCLAG00000007917	TRA2A	100	78.014	ENSSARG00000012900	TRA2A	100	78.014	Sorex_araneus
ENSCLAG00000007917	TRA2A	100	96.516	ENSSPUG00000006143	TRA2A	100	96.516	Sphenodon_punctatus
ENSCLAG00000007917	TRA2A	90	78.967	ENSSPAG00000004184	tra2a	90	78.967	Stegastes_partitus
ENSCLAG00000007917	TRA2A	100	99.645	ENSSSCG00000015387	TRA2A	100	99.645	Sus_scrofa
ENSCLAG00000007917	TRA2A	60	90.000	ENSTGUG00000002795	TRA2A	62	89.222	Taeniopygia_guttata
ENSCLAG00000007917	TRA2A	100	83.333	ENSTBEG00000013773	TRA2A	100	83.333	Tupaia_belangeri
ENSCLAG00000007917	TRA2A	100	99.291	ENSTTRG00000008922	TRA2A	100	99.291	Tursiops_truncatus
ENSCLAG00000007917	TRA2A	64	98.352	ENSUMAG00000001181	TRA2A	94	98.352	Ursus_maritimus
ENSCLAG00000007917	TRA2A	100	85.461	ENSVPAG00000001829	TRA2A	100	85.461	Vicugna_pacos
ENSCLAG00000007917	TRA2A	100	99.645	ENSVVUG00000001045	TRA2A	100	99.645	Vulpes_vulpes
ENSCLAG00000007917	TRA2A	90	83.270	ENSXETG00000007397	tra2a	90	83.270	Xenopus_tropicalis