EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000007997 (Gene tree)
Gene ID: 102029147
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 14846 bases
Position: chrJH721865.1:41360370-41375215
Accession: 102029147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000011601	RtcB	PF01139.17	1.1e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000011738	RTCB-201	1947	XM_013519150	ENSCLAP00000011601	505 (aa)	XP_013374604	UPI00038ED6E1

Gene Model

Click here to download ENSCLAG00000007997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000007997's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000007997	RTCB	100	99.406	ENSG00000100220	RTCB	100	99.406	Homo_sapiens
ENSCLAG00000007997	RTCB	100	94.455	ENSAPOG00000006040	rtcb	100	94.455	Acanthochromis_polyacanthus
ENSCLAG00000007997	RTCB	100	99.208	ENSAMEG00000016152	RTCB	100	99.208	Ailuropoda_melanoleuca
ENSCLAG00000007997	RTCB	100	90.099	ENSACIG00000009083	rtcb	100	90.099	Amphilophus_citrinellus
ENSCLAG00000007997	RTCB	100	94.653	ENSAOCG00000005662	rtcb	100	95.435	Amphiprion_ocellaris
ENSCLAG00000007997	RTCB	100	94.653	ENSAPEG00000024701	rtcb	100	94.653	Amphiprion_percula
ENSCLAG00000007997	RTCB	96	89.733	ENSAPEG00000024653	rtcb	100	89.733	Amphiprion_percula
ENSCLAG00000007997	RTCB	100	94.257	ENSATEG00000000618	rtcb	100	94.257	Anabas_testudineus
ENSCLAG00000007997	RTCB	100	94.027	ENSACAG00000014817	RTCB	100	94.027	Anolis_carolinensis
ENSCLAG00000007997	RTCB	72	97.222	ENSANAG00000023724	-	100	62.451	Aotus_nancymaae
ENSCLAG00000007997	RTCB	100	83.366	ENSANAG00000018191	-	91	83.366	Aotus_nancymaae
ENSCLAG00000007997	RTCB	100	93.069	ENSACLG00000008367	rtcb	100	93.913	Astatotilapia_calliptera
ENSCLAG00000007997	RTCB	100	94.455	ENSAMXG00000042320	rtcb	100	94.455	Astyanax_mexicanus
ENSCLAG00000007997	RTCB	100	99.406	ENSBTAG00000011070	RTCB	100	99.406	Bos_taurus
ENSCLAG00000007997	RTCB	100	73.267	WBGene00008877	rtcb-1	100	73.267	Caenorhabditis_elegans
ENSCLAG00000007997	RTCB	100	99.010	ENSCJAG00000006128	RTCB	100	99.010	Callithrix_jacchus
ENSCLAG00000007997	RTCB	100	94.851	ENSCAFG00000010789	-	100	94.851	Canis_familiaris
ENSCLAG00000007997	RTCB	100	99.208	ENSCAFG00000001785	RTCB	100	99.208	Canis_familiaris
ENSCLAG00000007997	RTCB	100	99.208	ENSCAFG00020004890	-	100	99.208	Canis_lupus_dingo
ENSCLAG00000007997	RTCB	87	95.455	ENSCAFG00020018953	-	99	95.455	Canis_lupus_dingo
ENSCLAG00000007997	RTCB	100	99.208	ENSCHIG00000027009	-	100	99.208	Capra_hircus
ENSCLAG00000007997	RTCB	100	98.812	ENSTSYG00000012320	RTCB	100	98.812	Carlito_syrichta
ENSCLAG00000007997	RTCB	99	94.643	ENSCAPG00000011647	RTCB	99	94.643	Cavia_aperea
ENSCLAG00000007997	RTCB	100	99.010	ENSCCAG00000000618	RTCB	100	99.010	Cebus_capucinus
ENSCLAG00000007997	RTCB	100	99.406	ENSCATG00000033424	RTCB	100	99.406	Cercocebus_atys
ENSCLAG00000007997	RTCB	100	99.208	ENSCSAG00000008351	RTCB	100	99.208	Chlorocebus_sabaeus
ENSCLAG00000007997	RTCB	100	84.752	ENSCHOG00000009123	RTCB	100	84.752	Choloepus_hoffmanni
ENSCLAG00000007997	RTCB	100	96.634	ENSCPBG00000023184	RTCB	100	96.634	Chrysemys_picta_bellii
ENSCLAG00000007997	RTCB	100	81.782	ENSCING00000003830	-	100	81.782	Ciona_intestinalis
ENSCLAG00000007997	RTCB	100	82.178	ENSCSAVG00000008124	-	99	82.178	Ciona_savignyi
ENSCLAG00000007997	RTCB	100	95.644	ENSCANG00000001891	RTCB	100	95.644	Colobus_angolensis_palliatus
ENSCLAG00000007997	RTCB	100	98.812	ENSCGRG00001011173	Rtcb	100	98.812	Cricetulus_griseus_chok1gshd
ENSCLAG00000007997	RTCB	99	94.036	ENSCGRG00000009587	-	99	94.036	Cricetulus_griseus_crigri
ENSCLAG00000007997	RTCB	100	93.861	ENSCSEG00000003986	rtcb	100	93.861	Cynoglossus_semilaevis
ENSCLAG00000007997	RTCB	82	93.269	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
ENSCLAG00000007997	RTCB	100	93.861	ENSDARG00000101047	rtcb	100	93.861	Danio_rerio
ENSCLAG00000007997	RTCB	80	96.314	ENSDNOG00000012425	RTCB	99	96.314	Dasypus_novemcinctus
ENSCLAG00000007997	RTCB	100	98.416	ENSDORG00000010855	Rtcb	100	98.416	Dipodomys_ordii
ENSCLAG00000007997	RTCB	99	85.686	FBgn0032781	RtcB	99	85.686	Drosophila_melanogaster
ENSCLAG00000007997	RTCB	100	92.475	ENSETEG00000001988	RTCB	100	92.475	Echinops_telfairi
ENSCLAG00000007997	RTCB	100	85.941	ENSEBUG00000014235	rtcb	100	85.941	Eptatretus_burgeri
ENSCLAG00000007997	RTCB	100	99.208	ENSEASG00005019059	RTCB	100	99.208	Equus_asinus_asinus
ENSCLAG00000007997	RTCB	100	99.208	ENSECAG00000023998	RTCB	100	99.208	Equus_caballus
ENSCLAG00000007997	RTCB	89	89.933	ENSEEUG00000006251	RTCB	100	89.933	Erinaceus_europaeus
ENSCLAG00000007997	RTCB	100	82.609	ENSELUG00000009275	rtcb	100	82.609	Esox_lucius
ENSCLAG00000007997	RTCB	100	99.406	ENSFCAG00000026480	RTCB	100	99.406	Felis_catus
ENSCLAG00000007997	RTCB	100	97.426	ENSFALG00000013334	RTCB	100	97.426	Ficedula_albicollis
ENSCLAG00000007997	RTCB	100	99.208	ENSFDAG00000018150	RTCB	100	99.208	Fukomys_damarensis
ENSCLAG00000007997	RTCB	100	94.257	ENSFHEG00000009595	rtcb	100	94.257	Fundulus_heteroclitus
ENSCLAG00000007997	RTCB	100	91.683	ENSGMOG00000018882	rtcb	100	91.683	Gadus_morhua
ENSCLAG00000007997	RTCB	100	97.228	ENSGALG00000012611	RTCB	100	97.228	Gallus_gallus
ENSCLAG00000007997	RTCB	100	94.851	ENSGAFG00000004198	rtcb	100	94.851	Gambusia_affinis
ENSCLAG00000007997	RTCB	100	93.465	ENSGACG00000000586	rtcb	100	93.465	Gasterosteus_aculeatus
ENSCLAG00000007997	RTCB	93	95.745	ENSGAGG00000019133	RTCB	98	95.745	Gopherus_agassizii
ENSCLAG00000007997	RTCB	100	99.406	ENSGGOG00000011402	RTCB	100	99.406	Gorilla_gorilla
ENSCLAG00000007997	RTCB	100	93.069	ENSHBUG00000020571	rtcb	100	93.069	Haplochromis_burtoni
ENSCLAG00000007997	RTCB	100	99.208	ENSHGLG00000004492	RTCB	100	99.208	Heterocephalus_glaber_female
ENSCLAG00000007997	RTCB	93	70.339	ENSHGLG00000001066	-	99	70.339	Heterocephalus_glaber_female
ENSCLAG00000007997	RTCB	100	99.208	ENSHGLG00100008965	RTCB	100	99.208	Heterocephalus_glaber_male
ENSCLAG00000007997	RTCB	100	91.321	ENSHCOG00000006450	rtcb	100	91.321	Hippocampus_comes
ENSCLAG00000007997	RTCB	100	94.257	ENSIPUG00000015443	rtcb	100	94.257	Ictalurus_punctatus
ENSCLAG00000007997	RTCB	100	99.208	ENSSTOG00000003878	RTCB	100	99.208	Ictidomys_tridecemlineatus
ENSCLAG00000007997	RTCB	100	98.812	ENSJJAG00000010667	Rtcb	100	98.812	Jaculus_jaculus
ENSCLAG00000007997	RTCB	100	94.455	ENSKMAG00000013178	rtcb	100	94.455	Kryptolebias_marmoratus
ENSCLAG00000007997	RTCB	100	93.267	ENSLBEG00000000214	rtcb	100	93.267	Labrus_bergylta
ENSCLAG00000007997	RTCB	100	94.257	ENSLBEG00000010566	RTCB	100	94.257	Labrus_bergylta
ENSCLAG00000007997	RTCB	100	95.644	ENSLACG00000013033	RTCB	100	95.644	Latimeria_chalumnae
ENSCLAG00000007997	RTCB	100	94.653	ENSLOCG00000016515	rtcb	99	94.653	Lepisosteus_oculatus
ENSCLAG00000007997	RTCB	100	98.416	ENSLAFG00000002082	RTCB	100	98.416	Loxodonta_africana
ENSCLAG00000007997	RTCB	100	99.208	ENSMFAG00000034419	RTCB	100	99.208	Macaca_fascicularis
ENSCLAG00000007997	RTCB	100	99.208	ENSMMUG00000006720	RTCB	100	99.208	Macaca_mulatta
ENSCLAG00000007997	RTCB	100	99.208	ENSMNEG00000040669	RTCB	100	99.208	Macaca_nemestrina
ENSCLAG00000007997	RTCB	100	99.406	ENSMLEG00000040505	RTCB	100	99.406	Mandrillus_leucophaeus
ENSCLAG00000007997	RTCB	100	94.455	ENSMAMG00000020676	rtcb	100	94.455	Mastacembelus_armatus
ENSCLAG00000007997	RTCB	100	93.069	ENSMZEG00005018942	rtcb	100	93.069	Maylandia_zebra
ENSCLAG00000007997	RTCB	100	96.844	ENSMGAG00000012805	RTCB	100	96.844	Meleagris_gallopavo
ENSCLAG00000007997	RTCB	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSCLAG00000007997	RTCB	100	99.208	ENSMICG00000013303	-	100	99.208	Microcebus_murinus
ENSCLAG00000007997	RTCB	100	79.802	ENSMICG00000036677	-	100	79.802	Microcebus_murinus
ENSCLAG00000007997	RTCB	100	98.812	ENSMOCG00000002440	Rtcb	100	98.812	Microtus_ochrogaster
ENSCLAG00000007997	RTCB	100	94.455	ENSMMOG00000005987	rtcb	100	94.455	Mola_mola
ENSCLAG00000007997	RTCB	100	98.020	ENSMODG00000001414	RTCB	100	98.020	Monodelphis_domestica
ENSCLAG00000007997	RTCB	100	94.257	ENSMALG00000007603	rtcb	100	94.257	Monopterus_albus
ENSCLAG00000007997	RTCB	100	98.812	MGP_CAROLIEiJ_G0015689	Rtcb	100	98.812	Mus_caroli
ENSCLAG00000007997	RTCB	100	98.812	ENSMUSG00000001783	Rtcb	100	98.812	Mus_musculus
ENSCLAG00000007997	RTCB	100	98.812	MGP_PahariEiJ_G0031396	Rtcb	100	98.812	Mus_pahari
ENSCLAG00000007997	RTCB	100	98.812	MGP_SPRETEiJ_G0016507	Rtcb	100	98.812	Mus_spretus
ENSCLAG00000007997	RTCB	100	99.208	ENSMPUG00000012285	RTCB	100	99.208	Mustela_putorius_furo
ENSCLAG00000007997	RTCB	100	96.450	ENSMLUG00000007803	RTCB	100	96.450	Myotis_lucifugus
ENSCLAG00000007997	RTCB	72	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSCLAG00000007997	RTCB	100	93.069	ENSNBRG00000017202	rtcb	100	93.069	Neolamprologus_brichardi
ENSCLAG00000007997	RTCB	100	99.406	ENSNLEG00000004960	RTCB	100	99.406	Nomascus_leucogenys
ENSCLAG00000007997	RTCB	100	72.673	ENSMEUG00000007809	-	100	72.673	Notamacropus_eugenii
ENSCLAG00000007997	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSCLAG00000007997	RTCB	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSCLAG00000007997	RTCB	100	65.743	ENSODEG00000005042	-	100	65.743	Octodon_degus
ENSCLAG00000007997	RTCB	100	93.861	ENSONIG00000007474	rtcb	100	93.861	Oreochromis_niloticus
ENSCLAG00000007997	RTCB	100	98.020	ENSOANG00000005524	RTCB	100	98.020	Ornithorhynchus_anatinus
ENSCLAG00000007997	RTCB	93	99.149	ENSOCUG00000008270	RTCB	96	99.149	Oryctolagus_cuniculus
ENSCLAG00000007997	RTCB	100	94.257	ENSORLG00000020093	rtcb	100	94.257	Oryzias_latipes
ENSCLAG00000007997	RTCB	100	94.257	ENSORLG00020003706	rtcb	100	94.257	Oryzias_latipes_hni
ENSCLAG00000007997	RTCB	100	94.455	ENSORLG00015002968	rtcb	100	94.455	Oryzias_latipes_hsok
ENSCLAG00000007997	RTCB	100	94.059	ENSOMEG00000021278	rtcb	100	94.059	Oryzias_melastigma
ENSCLAG00000007997	RTCB	100	98.614	ENSOGAG00000001425	RTCB	100	98.614	Otolemur_garnettii
ENSCLAG00000007997	RTCB	100	99.208	ENSOARG00000018008	RTCB	100	99.208	Ovis_aries
ENSCLAG00000007997	RTCB	100	99.406	ENSPPAG00000028667	RTCB	100	99.406	Pan_paniscus
ENSCLAG00000007997	RTCB	100	99.406	ENSPPRG00000004038	RTCB	100	99.406	Panthera_pardus
ENSCLAG00000007997	RTCB	94	96.211	ENSPTIG00000020499	RTCB	97	96.211	Panthera_tigris_altaica
ENSCLAG00000007997	RTCB	100	99.406	ENSPTRG00000014287	RTCB	100	99.406	Pan_troglodytes
ENSCLAG00000007997	RTCB	100	99.208	ENSPANG00000016035	RTCB	100	99.208	Papio_anubis
ENSCLAG00000007997	RTCB	100	92.673	ENSPKIG00000001881	rtcb	100	92.673	Paramormyrops_kingsleyae
ENSCLAG00000007997	RTCB	91	97.826	ENSPSIG00000011690	RTCB	100	97.826	Pelodiscus_sinensis
ENSCLAG00000007997	RTCB	100	94.653	ENSPMGG00000016672	rtcb	100	94.653	Periophthalmus_magnuspinnatus
ENSCLAG00000007997	RTCB	100	98.812	ENSPEMG00000019548	Rtcb	100	98.812	Peromyscus_maniculatus_bairdii
ENSCLAG00000007997	RTCB	100	91.485	ENSPMAG00000005657	rtcb	100	91.485	Petromyzon_marinus
ENSCLAG00000007997	RTCB	100	98.416	ENSPCIG00000009467	RTCB	100	98.416	Phascolarctos_cinereus
ENSCLAG00000007997	RTCB	100	95.248	ENSPFOG00000003058	rtcb	100	95.248	Poecilia_formosa
ENSCLAG00000007997	RTCB	100	95.050	ENSPLAG00000017663	rtcb	100	95.050	Poecilia_latipinna
ENSCLAG00000007997	RTCB	100	95.248	ENSPMEG00000006227	rtcb	100	95.248	Poecilia_mexicana
ENSCLAG00000007997	RTCB	100	94.851	ENSPREG00000018467	rtcb	100	94.851	Poecilia_reticulata
ENSCLAG00000007997	RTCB	100	99.406	ENSPPYG00000011752	RTCB	100	99.406	Pongo_abelii
ENSCLAG00000007997	RTCB	93	80.932	ENSPCAG00000013641	RTCB	100	80.932	Procavia_capensis
ENSCLAG00000007997	RTCB	100	99.406	ENSPCOG00000017243	RTCB	100	99.406	Propithecus_coquereli
ENSCLAG00000007997	RTCB	93	98.298	ENSPVAG00000002380	RTCB	100	98.298	Pteropus_vampyrus
ENSCLAG00000007997	RTCB	100	93.069	ENSPNYG00000022760	rtcb	100	93.069	Pundamilia_nyererei
ENSCLAG00000007997	RTCB	100	94.653	ENSPNAG00000009209	rtcb	100	94.653	Pygocentrus_nattereri
ENSCLAG00000007997	RTCB	100	98.812	ENSRNOG00000004813	Rtcb	100	98.812	Rattus_norvegicus
ENSCLAG00000007997	RTCB	100	90.514	ENSRBIG00000042090	RTCB	100	90.514	Rhinopithecus_bieti
ENSCLAG00000007997	RTCB	100	94.059	ENSSBOG00000020085	-	100	94.059	Saimiri_boliviensis_boliviensis
ENSCLAG00000007997	RTCB	94	99.367	ENSSHAG00000016277	RTCB	100	99.367	Sarcophilus_harrisii
ENSCLAG00000007997	RTCB	100	93.465	ENSSFOG00015011572	RTCB	100	93.465	Scleropages_formosus
ENSCLAG00000007997	RTCB	100	92.871	ENSSFOG00015000763	rtcb	100	92.871	Scleropages_formosus
ENSCLAG00000007997	RTCB	100	90.693	ENSSMAG00000005096	rtcb	100	90.693	Scophthalmus_maximus
ENSCLAG00000007997	RTCB	100	93.663	ENSSDUG00000012605	rtcb	100	93.663	Seriola_dumerili
ENSCLAG00000007997	RTCB	100	93.861	ENSSLDG00000019458	rtcb	100	93.861	Seriola_lalandi_dorsalis
ENSCLAG00000007997	RTCB	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSCLAG00000007997	RTCB	100	96.436	ENSSPUG00000012814	RTCB	100	96.436	Sphenodon_punctatus
ENSCLAG00000007997	RTCB	100	94.653	ENSSPAG00000004623	rtcb	100	94.653	Stegastes_partitus
ENSCLAG00000007997	RTCB	100	99.406	ENSSSCG00000000158	RTCB	100	99.406	Sus_scrofa
ENSCLAG00000007997	RTCB	100	97.426	ENSTGUG00000010947	RTCB	99	97.426	Taeniopygia_guttata
ENSCLAG00000007997	RTCB	91	95.217	ENSTRUG00000009880	rtcb	100	95.217	Takifugu_rubripes
ENSCLAG00000007997	RTCB	100	93.069	ENSTNIG00000002484	rtcb	100	93.069	Tetraodon_nigroviridis
ENSCLAG00000007997	RTCB	100	85.743	ENSTBEG00000004418	RTCB	100	85.743	Tupaia_belangeri
ENSCLAG00000007997	RTCB	93	98.723	ENSTTRG00000006417	RTCB	100	98.723	Tursiops_truncatus
ENSCLAG00000007997	RTCB	100	99.208	ENSUAMG00000022792	RTCB	100	99.208	Ursus_americanus
ENSCLAG00000007997	RTCB	100	99.208	ENSUMAG00000017225	RTCB	100	99.208	Ursus_maritimus
ENSCLAG00000007997	RTCB	100	99.208	ENSVPAG00000005375	RTCB	100	99.208	Vicugna_pacos
ENSCLAG00000007997	RTCB	100	99.208	ENSVVUG00000023408	RTCB	100	99.509	Vulpes_vulpes
ENSCLAG00000007997	RTCB	100	94.455	ENSXETG00000011523	rtcb	100	94.455	Xenopus_tropicalis
ENSCLAG00000007997	RTCB	100	94.851	ENSXMAG00000002855	rtcb	100	94.851	Xiphophorus_maculatus