EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000008220 (Gene tree)
Gene ID: 102022535
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 15038 bases
Position: chrJH721895.1:4885925-4900962
Accession: 102022535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000011912	TRM13	PF05206.14	4.4e-90	1	1
ENSCLAP00000011912	zf-U11-48K	PF05253.12	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000012052	TRMT13-201	1260	XM_013516438	ENSCLAP00000011912	419 (aa)	XP_013371892	-

Gene Model

Click here to download ENSCLAG00000008220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000008220's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000008220	TRMT13	100	85.246	ENSG00000122435	TRMT13	89	84.543	Homo_sapiens
ENSCLAG00000008220	TRMT13	98	47.894	ENSAPOG00000015131	trmt13	91	47.204	Acanthochromis_polyacanthus
ENSCLAG00000008220	TRMT13	100	83.841	ENSAMEG00000008917	TRMT13	89	83.607	Ailuropoda_melanoleuca
ENSCLAG00000008220	TRMT13	98	51.529	ENSACIG00000005804	trmt13	88	49.420	Amphilophus_citrinellus
ENSCLAG00000008220	TRMT13	98	47.345	ENSAOCG00000023585	trmt13	91	47.111	Amphiprion_ocellaris
ENSCLAG00000008220	TRMT13	98	47.345	ENSAPEG00000004025	trmt13	91	47.111	Amphiprion_percula
ENSCLAG00000008220	TRMT13	99	51.402	ENSATEG00000006597	trmt13	89	50.469	Anabas_testudineus
ENSCLAG00000008220	TRMT13	98	64.593	ENSAPLG00000014924	TRMT13	98	64.833	Anas_platyrhynchos
ENSCLAG00000008220	TRMT13	98	63.484	ENSACAG00000003498	TRMT13	89	63.246	Anolis_carolinensis
ENSCLAG00000008220	TRMT13	100	85.480	ENSANAG00000019525	TRMT13	89	84.543	Aotus_nancymaae
ENSCLAG00000008220	TRMT13	99	54.079	ENSACLG00000020018	trmt13	90	53.630	Astatotilapia_calliptera
ENSCLAG00000008220	TRMT13	98	53.756	ENSAMXG00000017963	trmt13	89	53.286	Astyanax_mexicanus
ENSCLAG00000008220	TRMT13	100	83.138	ENSBTAG00000015781	TRMT13	89	82.904	Bos_taurus
ENSCLAG00000008220	TRMT13	100	84.543	ENSCJAG00000000200	TRMT13	90	94.737	Callithrix_jacchus
ENSCLAG00000008220	TRMT13	73	82.484	ENSCAFG00000020021	TRMT13	99	82.166	Canis_familiaris
ENSCLAG00000008220	TRMT13	52	91.743	ENSCAFG00020011572	TRMT13	76	90.909	Canis_lupus_dingo
ENSCLAG00000008220	TRMT13	100	83.138	ENSCHIG00000015395	TRMT13	89	82.436	Capra_hircus
ENSCLAG00000008220	TRMT13	99	79.157	ENSTSYG00000010811	TRMT13	90	79.391	Carlito_syrichta
ENSCLAG00000008220	TRMT13	84	69.231	ENSCAPG00000009085	TRMT13	94	70.145	Cavia_aperea
ENSCLAG00000008220	TRMT13	100	88.525	ENSCPOG00000000694	TRMT13	89	88.208	Cavia_porcellus
ENSCLAG00000008220	TRMT13	100	85.948	ENSCCAG00000023772	TRMT13	89	85.012	Cebus_capucinus
ENSCLAG00000008220	TRMT13	100	85.480	ENSCATG00000033556	TRMT13	89	84.543	Cercocebus_atys
ENSCLAG00000008220	TRMT13	100	85.480	ENSCSAG00000001506	TRMT13	89	84.543	Chlorocebus_sabaeus
ENSCLAG00000008220	TRMT13	100	67.606	ENSCPBG00000026671	TRMT13	89	68.000	Chrysemys_picta_bellii
ENSCLAG00000008220	TRMT13	100	85.714	ENSCANG00000034659	TRMT13	89	84.778	Colobus_angolensis_palliatus
ENSCLAG00000008220	TRMT13	99	82.160	ENSCGRG00001021601	Trmt13	88	81.455	Cricetulus_griseus_chok1gshd
ENSCLAG00000008220	TRMT13	59	74.708	ENSCGRG00000000093	-	99	73.930	Cricetulus_griseus_crigri
ENSCLAG00000008220	TRMT13	99	48.687	ENSCSEG00000000591	trmt13	88	48.687	Cynoglossus_semilaevis
ENSCLAG00000008220	TRMT13	98	50.353	ENSCVAG00000017342	trmt13	85	50.588	Cyprinodon_variegatus
ENSCLAG00000008220	TRMT13	98	56.595	ENSDARG00000102846	trmt13	88	56.386	Danio_rerio
ENSCLAG00000008220	TRMT13	52	91.743	ENSDNOG00000001710	TRMT13	67	90.909	Dasypus_novemcinctus
ENSCLAG00000008220	TRMT13	100	81.265	ENSDORG00000015808	Trmt13	89	80.328	Dipodomys_ordii
ENSCLAG00000008220	TRMT13	98	31.678	FBgn0037435	CG18048	83	31.678	Drosophila_melanogaster
ENSCLAG00000008220	TRMT13	99	70.423	ENSETEG00000005819	TRMT13	87	70.071	Echinops_telfairi
ENSCLAG00000008220	TRMT13	98	45.894	ENSEBUG00000014444	trmt13	94	43.158	Eptatretus_burgeri
ENSCLAG00000008220	TRMT13	100	85.246	ENSEASG00005015918	TRMT13	89	84.543	Equus_asinus_asinus
ENSCLAG00000008220	TRMT13	100	85.012	ENSECAG00000022626	TRMT13	89	84.309	Equus_caballus
ENSCLAG00000008220	TRMT13	77	76.562	ENSEEUG00000000294	TRMT13	68	77.778	Erinaceus_europaeus
ENSCLAG00000008220	TRMT13	98	56.057	ENSELUG00000003803	trmt13	89	56.028	Esox_lucius
ENSCLAG00000008220	TRMT13	100	84.075	ENSFCAG00000030618	TRMT13	89	83.372	Felis_catus
ENSCLAG00000008220	TRMT13	99	64.846	ENSFALG00000002424	TRMT13	88	64.608	Ficedula_albicollis
ENSCLAG00000008220	TRMT13	99	88.389	ENSFDAG00000006342	TRMT13	87	87.678	Fukomys_damarensis
ENSCLAG00000008220	TRMT13	80	52.722	ENSFHEG00000022954	trmt13	86	52.542	Fundulus_heteroclitus
ENSCLAG00000008220	TRMT13	98	49.633	ENSGMOG00000013223	trmt13	90	49.878	Gadus_morhua
ENSCLAG00000008220	TRMT13	99	64.115	ENSGALG00000005290	TRMT13	87	64.493	Gallus_gallus
ENSCLAG00000008220	TRMT13	76	52.266	ENSGAFG00000001577	trmt13	71	52.266	Gambusia_affinis
ENSCLAG00000008220	TRMT13	99	51.185	ENSGACG00000013428	trmt13	89	51.190	Gasterosteus_aculeatus
ENSCLAG00000008220	TRMT13	100	67.681	ENSGAGG00000023303	TRMT13	89	68.075	Gopherus_agassizii
ENSCLAG00000008220	TRMT13	100	85.012	ENSGGOG00000005616	TRMT13	89	84.309	Gorilla_gorilla
ENSCLAG00000008220	TRMT13	99	54.312	ENSHBUG00000007754	trmt13	90	53.864	Haplochromis_burtoni
ENSCLAG00000008220	TRMT13	99	88.152	ENSHGLG00000002164	TRMT13	87	87.441	Heterocephalus_glaber_female
ENSCLAG00000008220	TRMT13	99	88.152	ENSHGLG00100001618	TRMT13	87	87.441	Heterocephalus_glaber_male
ENSCLAG00000008220	TRMT13	99	47.381	ENSHCOG00000020553	trmt13	88	47.368	Hippocampus_comes
ENSCLAG00000008220	TRMT13	98	56.250	ENSIPUG00000024787	trmt13	89	56.522	Ictalurus_punctatus
ENSCLAG00000008220	TRMT13	100	86.183	ENSSTOG00000013483	TRMT13	89	85.480	Ictidomys_tridecemlineatus
ENSCLAG00000008220	TRMT13	100	81.499	ENSJJAG00000018012	Trmt13	90	80.796	Jaculus_jaculus
ENSCLAG00000008220	TRMT13	72	50.000	ENSKMAG00000007639	trmt13	92	49.832	Kryptolebias_marmoratus
ENSCLAG00000008220	TRMT13	99	49.767	ENSLBEG00000020238	trmt13	91	50.000	Labrus_bergylta
ENSCLAG00000008220	TRMT13	97	61.429	ENSLACG00000013153	TRMT13	99	60.150	Latimeria_chalumnae
ENSCLAG00000008220	TRMT13	98	58.950	ENSLOCG00000000418	trmt13	88	58.173	Lepisosteus_oculatus
ENSCLAG00000008220	TRMT13	86	81.351	ENSLAFG00000002383	TRMT13	100	80.270	Loxodonta_africana
ENSCLAG00000008220	TRMT13	100	85.480	ENSMFAG00000034681	TRMT13	89	84.543	Macaca_fascicularis
ENSCLAG00000008220	TRMT13	100	85.480	ENSMMUG00000004243	TRMT13	89	84.543	Macaca_mulatta
ENSCLAG00000008220	TRMT13	100	85.480	ENSMNEG00000036102	TRMT13	89	84.543	Macaca_nemestrina
ENSCLAG00000008220	TRMT13	100	85.714	ENSMLEG00000034258	TRMT13	89	84.778	Mandrillus_leucophaeus
ENSCLAG00000008220	TRMT13	99	50.000	ENSMAMG00000016597	trmt13	90	50.000	Mastacembelus_armatus
ENSCLAG00000008220	TRMT13	99	53.846	ENSMZEG00005020959	trmt13	90	53.396	Maylandia_zebra
ENSCLAG00000008220	TRMT13	98	66.184	ENSMGAG00000006970	TRMT13	98	65.942	Meleagris_gallopavo
ENSCLAG00000008220	TRMT13	99	81.455	ENSMAUG00000010448	Trmt13	88	80.986	Mesocricetus_auratus
ENSCLAG00000008220	TRMT13	100	85.981	ENSMICG00000005283	TRMT13	89	85.246	Microcebus_murinus
ENSCLAG00000008220	TRMT13	99	80.516	ENSMOCG00000019914	Trmt13	89	80.047	Microtus_ochrogaster
ENSCLAG00000008220	TRMT13	100	73.474	ENSMODG00000003646	TRMT13	88	73.239	Monodelphis_domestica
ENSCLAG00000008220	TRMT13	99	50.966	ENSMALG00000020965	trmt13	88	50.966	Monopterus_albus
ENSCLAG00000008220	TRMT13	99	83.019	MGP_CAROLIEiJ_G0025568	Trmt13	94	90.476	Mus_caroli
ENSCLAG00000008220	TRMT13	99	83.255	ENSMUSG00000033439	Trmt13	94	90.476	Mus_musculus
ENSCLAG00000008220	TRMT13	99	83.491	MGP_PahariEiJ_G0027014	Trmt13	93	90.964	Mus_pahari
ENSCLAG00000008220	TRMT13	99	83.019	MGP_SPRETEiJ_G0026518	Trmt13	94	90.476	Mus_spretus
ENSCLAG00000008220	TRMT13	89	83.110	ENSMPUG00000002078	-	100	82.842	Mustela_putorius_furo
ENSCLAG00000008220	TRMT13	100	74.473	ENSMLUG00000002124	TRMT13	89	73.770	Myotis_lucifugus
ENSCLAG00000008220	TRMT13	99	50.231	ENSNBRG00000006783	trmt13	88	49.767	Neolamprologus_brichardi
ENSCLAG00000008220	TRMT13	100	85.012	ENSNLEG00000035917	TRMT13	89	84.075	Nomascus_leucogenys
ENSCLAG00000008220	TRMT13	64	90.367	ENSOPRG00000012048	TRMT13	56	90.367	Ochotona_princeps
ENSCLAG00000008220	TRMT13	99	53.613	ENSONIG00000004574	trmt13	90	53.162	Oreochromis_niloticus
ENSCLAG00000008220	TRMT13	99	70.588	ENSOANG00000012057	TRMT13	98	69.647	Ornithorhynchus_anatinus
ENSCLAG00000008220	TRMT13	100	83.803	ENSOCUG00000023095	TRMT13	89	84.272	Oryctolagus_cuniculus
ENSCLAG00000008220	TRMT13	96	49.400	ENSORLG00000003320	trmt13	89	49.879	Oryzias_latipes
ENSCLAG00000008220	TRMT13	95	49.136	ENSORLG00020005972	trmt13	88	49.639	Oryzias_latipes_hni
ENSCLAG00000008220	TRMT13	99	51.756	ENSORLG00015002270	trmt13	90	52.494	Oryzias_latipes_hsok
ENSCLAG00000008220	TRMT13	99	49.886	ENSOMEG00000006724	trmt13	88	51.741	Oryzias_melastigma
ENSCLAG00000008220	TRMT13	98	85.476	ENSOGAG00000005618	TRMT13	86	84.309	Otolemur_garnettii
ENSCLAG00000008220	TRMT13	100	83.138	ENSOARG00000017983	TRMT13	89	82.436	Ovis_aries
ENSCLAG00000008220	TRMT13	100	85.246	ENSPPAG00000043736	TRMT13	89	84.543	Pan_paniscus
ENSCLAG00000008220	TRMT13	100	84.309	ENSPPRG00000003424	TRMT13	89	83.607	Panthera_pardus
ENSCLAG00000008220	TRMT13	100	84.309	ENSPTIG00000018598	TRMT13	89	83.607	Panthera_tigris_altaica
ENSCLAG00000008220	TRMT13	100	85.246	ENSPTRG00000001001	TRMT13	89	84.543	Pan_troglodytes
ENSCLAG00000008220	TRMT13	100	85.714	ENSPANG00000007598	TRMT13	89	84.778	Papio_anubis
ENSCLAG00000008220	TRMT13	99	55.981	ENSPKIG00000001514	trmt13	89	56.039	Paramormyrops_kingsleyae
ENSCLAG00000008220	TRMT13	92	67.176	ENSPSIG00000012703	TRMT13	94	66.921	Pelodiscus_sinensis
ENSCLAG00000008220	TRMT13	99	51.442	ENSPMGG00000013298	trmt13	85	51.442	Periophthalmus_magnuspinnatus
ENSCLAG00000008220	TRMT13	99	79.343	ENSPEMG00000000275	Trmt13	89	78.638	Peromyscus_maniculatus_bairdii
ENSCLAG00000008220	TRMT13	97	46.420	ENSPMAG00000000823	trmt13	88	45.727	Petromyzon_marinus
ENSCLAG00000008220	TRMT13	100	73.068	ENSPCIG00000007699	TRMT13	89	72.834	Phascolarctos_cinereus
ENSCLAG00000008220	TRMT13	100	49.767	ENSPFOG00000008675	trmt13	88	49.165	Poecilia_formosa
ENSCLAG00000008220	TRMT13	98	49.420	ENSPLAG00000009709	trmt13	90	48.810	Poecilia_latipinna
ENSCLAG00000008220	TRMT13	97	47.733	ENSPMEG00000022954	trmt13	89	47.733	Poecilia_mexicana
ENSCLAG00000008220	TRMT13	76	52.870	ENSPREG00000005645	trmt13	76	52.564	Poecilia_reticulata
ENSCLAG00000008220	TRMT13	100	85.012	ENSPPYG00000001120	TRMT13	89	84.075	Pongo_abelii
ENSCLAG00000008220	TRMT13	100	82.436	ENSPCAG00000002340	TRMT13	89	81.733	Procavia_capensis
ENSCLAG00000008220	TRMT13	100	85.714	ENSPCOG00000017984	TRMT13	89	85.012	Propithecus_coquereli
ENSCLAG00000008220	TRMT13	100	83.607	ENSPVAG00000017430	TRMT13	89	82.904	Pteropus_vampyrus
ENSCLAG00000008220	TRMT13	99	52.009	ENSPNYG00000013690	trmt13	90	51.544	Pundamilia_nyererei
ENSCLAG00000008220	TRMT13	98	54.916	ENSPNAG00000022130	trmt13	89	54.916	Pygocentrus_nattereri
ENSCLAG00000008220	TRMT13	99	83.255	ENSRNOG00000015140	Trmt13	85	83.491	Rattus_norvegicus
ENSCLAG00000008220	TRMT13	100	85.714	ENSRBIG00000037686	TRMT13	89	84.778	Rhinopithecus_bieti
ENSCLAG00000008220	TRMT13	100	85.714	ENSRROG00000044057	TRMT13	89	84.778	Rhinopithecus_roxellana
ENSCLAG00000008220	TRMT13	100	85.948	ENSSBOG00000026541	TRMT13	89	85.012	Saimiri_boliviensis_boliviensis
ENSCLAG00000008220	TRMT13	100	73.068	ENSSHAG00000005213	TRMT13	95	72.834	Sarcophilus_harrisii
ENSCLAG00000008220	TRMT13	99	54.632	ENSSFOG00015017560	trmt13	89	55.314	Scleropages_formosus
ENSCLAG00000008220	TRMT13	99	50.000	ENSSMAG00000014592	trmt13	96	47.917	Scophthalmus_maximus
ENSCLAG00000008220	TRMT13	98	50.704	ENSSDUG00000015508	trmt13	88	50.345	Seriola_dumerili
ENSCLAG00000008220	TRMT13	98	50.939	ENSSLDG00000019060	trmt13	87	50.939	Seriola_lalandi_dorsalis
ENSCLAG00000008220	TRMT13	99	72.170	ENSSARG00000010344	TRMT13	89	72.170	Sorex_araneus
ENSCLAG00000008220	TRMT13	100	65.258	ENSSPUG00000016339	TRMT13	93	64.471	Sphenodon_punctatus
ENSCLAG00000008220	TRMT13	98	51.435	ENSSPAG00000011922	trmt13	90	51.544	Stegastes_partitus
ENSCLAG00000008220	TRMT13	100	84.543	ENSSSCG00000006869	TRMT13	89	83.607	Sus_scrofa
ENSCLAG00000008220	TRMT13	100	65.728	ENSTGUG00000005253	TRMT13	91	65.330	Taeniopygia_guttata
ENSCLAG00000008220	TRMT13	97	49.645	ENSTRUG00000008400	trmt13	90	48.718	Takifugu_rubripes
ENSCLAG00000008220	TRMT13	97	67.788	ENSTBEG00000008911	TRMT13	100	67.067	Tupaia_belangeri
ENSCLAG00000008220	TRMT13	100	78.220	ENSUAMG00000017251	TRMT13	88	77.752	Ursus_americanus
ENSCLAG00000008220	TRMT13	100	83.841	ENSUMAG00000007901	TRMT13	99	83.372	Ursus_maritimus
ENSCLAG00000008220	TRMT13	100	67.681	ENSVPAG00000001034	TRMT13	99	66.979	Vicugna_pacos
ENSCLAG00000008220	TRMT13	99	84.272	ENSVVUG00000021996	TRMT13	88	84.038	Vulpes_vulpes
ENSCLAG00000008220	TRMT13	98	56.341	ENSXETG00000013204	trmt13	87	54.676	Xenopus_tropicalis
ENSCLAG00000008220	TRMT13	98	48.492	ENSXMAG00000010765	trmt13	90	48.333	Xiphophorus_maculatus