EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000008223 (Gene tree)
Gene ID: 102017838
Gene Symbol: TRNAU1AP
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 17451 bases
Position: chrJH721912.1:7645715-7663165
Accession: 102017838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000011915	RRM_1	PF00076.22	2e-27	1	2
ENSCLAP00000011915	RRM_1	PF00076.22	2e-27	2	2
ENSCLAP00000011916	RRM_1	PF00076.22	8.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000012055	TRNAU1AP-201	1126	XM_005394958	ENSCLAP00000011915	287 (aa)	XP_005395015	UPI00038EF679
ENSCLAT00000012056	TRNAU1AP-202	744	-	ENSCLAP00000011916	247 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000008223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000008223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000008223	TRNAU1AP	78	30.198	ENSCLAG00000009857	TIA1	69	31.285
ENSCLAG00000008223	TRNAU1AP	60	34.586	ENSCLAG00000001273	TIAL1	69	30.366
ENSCLAG00000008223	TRNAU1AP	53	31.818	ENSCLAG00000017628	PABPC4L	66	32.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSG00000180098	TRNAU1AP	100	98.606	Homo_sapiens
ENSCLAG00000008223	TRNAU1AP	98	58.746	ENSAPOG00000007148	TRNAU1AP	98	58.746	Acanthochromis_polyacanthus
ENSCLAG00000008223	TRNAU1AP	100	97.561	ENSAMEG00000011367	TRNAU1AP	100	97.561	Ailuropoda_melanoleuca
ENSCLAG00000008223	TRNAU1AP	91	70.115	ENSACIG00000004161	trnau1apa	93	70.115	Amphilophus_citrinellus
ENSCLAG00000008223	TRNAU1AP	98	58.416	ENSAOCG00000008056	trnau1apa	98	58.416	Amphiprion_ocellaris
ENSCLAG00000008223	TRNAU1AP	98	58.416	ENSAPEG00000008868	trnau1apa	98	58.586	Amphiprion_percula
ENSCLAG00000008223	TRNAU1AP	96	59.732	ENSATEG00000012140	trnau1apa	98	56.270	Anabas_testudineus
ENSCLAG00000008223	TRNAU1AP	94	93.704	ENSAPLG00000002606	TRNAU1AP	99	93.704	Anas_platyrhynchos
ENSCLAG00000008223	TRNAU1AP	99	76.923	ENSACAG00000003995	-	99	76.923	Anolis_carolinensis
ENSCLAG00000008223	TRNAU1AP	67	51.295	ENSACAG00000004205	-	74	51.295	Anolis_carolinensis
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSANAG00000018976	TRNAU1AP	100	98.606	Aotus_nancymaae
ENSCLAG00000008223	TRNAU1AP	98	59.468	ENSACLG00000018515	trnau1apa	98	59.801	Astatotilapia_calliptera
ENSCLAG00000008223	TRNAU1AP	99	56.401	ENSAMXG00000013750	trnau1apa	94	56.401	Astyanax_mexicanus
ENSCLAG00000008223	TRNAU1AP	94	65.556	ENSAMXG00000029240	-	96	65.556	Astyanax_mexicanus
ENSCLAG00000008223	TRNAU1AP	100	98.258	ENSBTAG00000010393	TRNAU1AP	100	98.258	Bos_taurus
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSCJAG00000009717	TRNAU1AP	100	98.606	Callithrix_jacchus
ENSCLAG00000008223	TRNAU1AP	100	98.955	ENSCAFG00000011735	TRNAU1AP	100	98.955	Canis_familiaris
ENSCLAG00000008223	TRNAU1AP	100	98.955	ENSCAFG00020023584	TRNAU1AP	100	98.955	Canis_lupus_dingo
ENSCLAG00000008223	TRNAU1AP	100	97.976	ENSCHIG00000023215	TRNAU1AP	100	97.976	Capra_hircus
ENSCLAG00000008223	TRNAU1AP	100	98.258	ENSTSYG00000003506	TRNAU1AP	100	98.258	Carlito_syrichta
ENSCLAG00000008223	TRNAU1AP	100	99.303	ENSCPOG00000001925	TRNAU1AP	100	99.303	Cavia_porcellus
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSCCAG00000037506	TRNAU1AP	100	98.606	Cebus_capucinus
ENSCLAG00000008223	TRNAU1AP	100	98.381	ENSCATG00000044617	TRNAU1AP	100	98.381	Cercocebus_atys
ENSCLAG00000008223	TRNAU1AP	100	98.258	ENSCSAG00000001014	TRNAU1AP	100	98.258	Chlorocebus_sabaeus
ENSCLAG00000008223	TRNAU1AP	95	93.431	ENSCPBG00000000121	TRNAU1AP	100	93.431	Chrysemys_picta_bellii
ENSCLAG00000008223	TRNAU1AP	99	44.681	ENSCSAVG00000011781	-	98	44.681	Ciona_savignyi
ENSCLAG00000008223	TRNAU1AP	100	86.760	ENSCANG00000041949	TRNAU1AP	100	97.740	Colobus_angolensis_palliatus
ENSCLAG00000008223	TRNAU1AP	100	98.258	ENSCGRG00001004713	Trnau1ap	100	98.258	Cricetulus_griseus_chok1gshd
ENSCLAG00000008223	TRNAU1AP	100	98.258	ENSCGRG00000014532	Trnau1ap	100	98.258	Cricetulus_griseus_crigri
ENSCLAG00000008223	TRNAU1AP	98	58.333	ENSCSEG00000006663	trnau1apa	94	58.607	Cynoglossus_semilaevis
ENSCLAG00000008223	TRNAU1AP	97	57.823	ENSCVAG00000018069	trnau1apa	94	59.341	Cyprinodon_variegatus
ENSCLAG00000008223	TRNAU1AP	96	53.357	ENSDARG00000101323	trnau1apa	89	51.408	Danio_rerio
ENSCLAG00000008223	TRNAU1AP	100	98.955	ENSDNOG00000033009	TRNAU1AP	100	98.955	Dasypus_novemcinctus
ENSCLAG00000008223	TRNAU1AP	67	77.604	ENSDNOG00000047959	-	97	78.075	Dasypus_novemcinctus
ENSCLAG00000008223	TRNAU1AP	99	90.559	ENSDORG00000006349	Trnau1ap	100	99.567	Dipodomys_ordii
ENSCLAG00000008223	TRNAU1AP	96	51.493	FBgn0031607	CG15440	51	52.023	Drosophila_melanogaster
ENSCLAG00000008223	TRNAU1AP	85	93.878	ENSETEG00000012594	TRNAU1AP	100	93.878	Echinops_telfairi
ENSCLAG00000008223	TRNAU1AP	55	59.341	ENSEBUG00000006349	-	60	59.341	Eptatretus_burgeri
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSEASG00005010062	TRNAU1AP	100	98.606	Equus_asinus_asinus
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSECAG00000012980	TRNAU1AP	100	98.606	Equus_caballus
ENSCLAG00000008223	TRNAU1AP	96	70.526	ENSELUG00000022790	-	94	53.390	Esox_lucius
ENSCLAG00000008223	TRNAU1AP	96	63.415	ENSELUG00000017686	trnau1apa	94	63.066	Esox_lucius
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSFCAG00000013401	TRNAU1AP	100	98.606	Felis_catus
ENSCLAG00000008223	TRNAU1AP	95	93.796	ENSFALG00000001371	TRNAU1AP	100	93.796	Ficedula_albicollis
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSFDAG00000018599	TRNAU1AP	100	98.606	Fukomys_damarensis
ENSCLAG00000008223	TRNAU1AP	79	60.816	ENSFHEG00000018232	trnau1apa	86	56.757	Fundulus_heteroclitus
ENSCLAG00000008223	TRNAU1AP	95	53.846	ENSGMOG00000016508	trnau1apa	93	54.930	Gadus_morhua
ENSCLAG00000008223	TRNAU1AP	68	48.826	ENSGALG00000012721	C2H6orf52	95	44.402	Gallus_gallus
ENSCLAG00000008223	TRNAU1AP	100	92.683	ENSGALG00000001310	-	100	92.683	Gallus_gallus
ENSCLAG00000008223	TRNAU1AP	78	58.403	ENSGAFG00000004928	trnau1apa	90	59.244	Gambusia_affinis
ENSCLAG00000008223	TRNAU1AP	98	60.274	ENSGACG00000001443	trnau1apa	95	59.932	Gasterosteus_aculeatus
ENSCLAG00000008223	TRNAU1AP	95	93.796	ENSGAGG00000004940	TRNAU1AP	100	93.796	Gopherus_agassizii
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSGGOG00000003511	TRNAU1AP	100	98.606	Gorilla_gorilla
ENSCLAG00000008223	TRNAU1AP	98	58.497	ENSHBUG00000002510	trnau1apa	98	58.824	Haplochromis_burtoni
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSHGLG00000010380	TRNAU1AP	100	98.606	Heterocephalus_glaber_female
ENSCLAG00000008223	TRNAU1AP	100	96.167	ENSHGLG00100012699	TRNAU1AP	100	96.167	Heterocephalus_glaber_male
ENSCLAG00000008223	TRNAU1AP	99	58.086	ENSHCOG00000014770	trnau1apa	97	66.429	Hippocampus_comes
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSSTOG00000000079	TRNAU1AP	100	98.606	Ictidomys_tridecemlineatus
ENSCLAG00000008223	TRNAU1AP	100	98.258	ENSJJAG00000010128	Trnau1ap	100	98.258	Jaculus_jaculus
ENSCLAG00000008223	TRNAU1AP	95	60.208	ENSKMAG00000001230	trnau1apa	93	58.478	Kryptolebias_marmoratus
ENSCLAG00000008223	TRNAU1AP	95	60.751	ENSLBEG00000011683	trnau1apa	93	59.864	Labrus_bergylta
ENSCLAG00000008223	TRNAU1AP	99	72.632	ENSLACG00000005541	TRNAU1AP	99	72.632	Latimeria_chalumnae
ENSCLAG00000008223	TRNAU1AP	99	72.378	ENSLOCG00000004041	trnau1apa	99	71.329	Lepisosteus_oculatus
ENSCLAG00000008223	TRNAU1AP	100	98.258	ENSLAFG00000007628	TRNAU1AP	100	98.258	Loxodonta_africana
ENSCLAG00000008223	TRNAU1AP	100	98.258	ENSMFAG00000043751	TRNAU1AP	100	98.258	Macaca_fascicularis
ENSCLAG00000008223	TRNAU1AP	100	98.381	ENSMMUG00000006561	TRNAU1AP	100	98.381	Macaca_mulatta
ENSCLAG00000008223	TRNAU1AP	100	98.381	ENSMNEG00000044201	TRNAU1AP	100	98.381	Macaca_nemestrina
ENSCLAG00000008223	TRNAU1AP	100	98.258	ENSMLEG00000015649	TRNAU1AP	100	98.258	Mandrillus_leucophaeus
ENSCLAG00000008223	TRNAU1AP	89	70.588	ENSMAMG00000001247	trnau1apa	98	58.824	Mastacembelus_armatus
ENSCLAG00000008223	TRNAU1AP	98	59.468	ENSMZEG00005017722	trnau1apa	98	59.801	Maylandia_zebra
ENSCLAG00000008223	TRNAU1AP	97	92.446	ENSMGAG00000002105	TRNAU1AP	100	92.446	Meleagris_gallopavo
ENSCLAG00000008223	TRNAU1AP	100	98.955	ENSMICG00000008386	TRNAU1AP	100	98.955	Microcebus_murinus
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSMOCG00000011189	Trnau1ap	100	98.606	Microtus_ochrogaster
ENSCLAG00000008223	TRNAU1AP	95	58.088	ENSMMOG00000012107	trnau1apa	92	58.088	Mola_mola
ENSCLAG00000008223	TRNAU1AP	100	95.470	ENSMODG00000010927	TRNAU1AP	100	95.470	Monodelphis_domestica
ENSCLAG00000008223	TRNAU1AP	96	61.092	ENSMALG00000016778	trnau1apa	94	58.362	Monopterus_albus
ENSCLAG00000008223	TRNAU1AP	100	97.976	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	100.000	Mus_caroli
ENSCLAG00000008223	TRNAU1AP	100	97.976	ENSMUSG00000028898	Trnau1ap	100	100.000	Mus_musculus
ENSCLAG00000008223	TRNAU1AP	100	98.381	MGP_PahariEiJ_G0028896	Trnau1ap	100	100.000	Mus_pahari
ENSCLAG00000008223	TRNAU1AP	100	98.381	MGP_SPRETEiJ_G0027544	Trnau1ap	100	100.000	Mus_spretus
ENSCLAG00000008223	TRNAU1AP	100	97.909	ENSMPUG00000015511	TRNAU1AP	100	97.909	Mustela_putorius_furo
ENSCLAG00000008223	TRNAU1AP	100	98.955	ENSMLUG00000012586	TRNAU1AP	100	98.955	Myotis_lucifugus
ENSCLAG00000008223	TRNAU1AP	100	97.571	ENSNGAG00000015881	Trnau1ap	100	97.571	Nannospalax_galili
ENSCLAG00000008223	TRNAU1AP	99	56.997	ENSNBRG00000001758	trnau1apa	98	56.997	Neolamprologus_brichardi
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSNLEG00000009822	TRNAU1AP	100	98.606	Nomascus_leucogenys
ENSCLAG00000008223	TRNAU1AP	97	94.245	ENSMEUG00000006117	TRNAU1AP	100	94.245	Notamacropus_eugenii
ENSCLAG00000008223	TRNAU1AP	82	96.364	ENSOPRG00000007084	-	69	96.364	Ochotona_princeps
ENSCLAG00000008223	TRNAU1AP	100	99.652	ENSODEG00000002970	TRNAU1AP	100	99.652	Octodon_degus
ENSCLAG00000008223	TRNAU1AP	80	59.036	ENSONIG00000004715	trnau1apa	95	59.917	Oreochromis_niloticus
ENSCLAG00000008223	TRNAU1AP	99	74.825	ENSOANG00000005325	-	99	74.825	Ornithorhynchus_anatinus
ENSCLAG00000008223	TRNAU1AP	100	96.516	ENSOCUG00000011704	-	100	96.516	Oryctolagus_cuniculus
ENSCLAG00000008223	TRNAU1AP	100	76.389	ENSOCUG00000002353	-	100	76.389	Oryctolagus_cuniculus
ENSCLAG00000008223	TRNAU1AP	89	76.953	ENSOCUG00000006834	-	100	75.000	Oryctolagus_cuniculus
ENSCLAG00000008223	TRNAU1AP	98	58.865	ENSORLG00000010428	trnau1apa	95	57.042	Oryzias_latipes
ENSCLAG00000008223	TRNAU1AP	98	58.020	ENSORLG00020000926	trnau1ap	95	56.849	Oryzias_latipes_hni
ENSCLAG00000008223	TRNAU1AP	98	58.020	ENSORLG00015009858	trnau1ap	95	56.849	Oryzias_latipes_hsok
ENSCLAG00000008223	TRNAU1AP	98	59.044	ENSOMEG00000007873	trnau1apa	95	56.164	Oryzias_melastigma
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSOGAG00000002274	TRNAU1AP	100	98.606	Otolemur_garnettii
ENSCLAG00000008223	TRNAU1AP	100	97.909	ENSOARG00000002843	TRNAU1AP	100	97.909	Ovis_aries
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSPPAG00000033927	TRNAU1AP	100	98.606	Pan_paniscus
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSPPRG00000004416	TRNAU1AP	100	98.606	Panthera_pardus
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSPTIG00000016677	TRNAU1AP	100	98.606	Panthera_tigris_altaica
ENSCLAG00000008223	TRNAU1AP	93	80.074	ENSPTRG00000000434	-	97	78.967	Pan_troglodytes
ENSCLAG00000008223	TRNAU1AP	100	98.381	ENSPANG00000016019	TRNAU1AP	100	98.381	Papio_anubis
ENSCLAG00000008223	TRNAU1AP	95	59.717	ENSPKIG00000015511	trnau1apa	92	57.951	Paramormyrops_kingsleyae
ENSCLAG00000008223	TRNAU1AP	94	74.468	ENSPKIG00000022205	-	93	77.528	Paramormyrops_kingsleyae
ENSCLAG00000008223	TRNAU1AP	95	94.161	ENSPSIG00000006864	TRNAU1AP	100	94.161	Pelodiscus_sinensis
ENSCLAG00000008223	TRNAU1AP	94	61.397	ENSPMGG00000023893	trnau1apa	91	60.148	Periophthalmus_magnuspinnatus
ENSCLAG00000008223	TRNAU1AP	100	97.909	ENSPEMG00000007877	Trnau1ap	100	97.909	Peromyscus_maniculatus_bairdii
ENSCLAG00000008223	TRNAU1AP	60	60.227	ENSPMAG00000000592	trnau1apa	97	60.227	Petromyzon_marinus
ENSCLAG00000008223	TRNAU1AP	78	60.987	ENSPMAG00000005934	trnau1apa	96	60.185	Petromyzon_marinus
ENSCLAG00000008223	TRNAU1AP	95	56.944	ENSPFOG00000008100	trnau1apa	93	57.639	Poecilia_formosa
ENSCLAG00000008223	TRNAU1AP	91	56.679	ENSPLAG00000010236	trnau1apa	93	57.401	Poecilia_latipinna
ENSCLAG00000008223	TRNAU1AP	96	55.862	ENSPMEG00000016387	trnau1apa	92	56.552	Poecilia_mexicana
ENSCLAG00000008223	TRNAU1AP	93	53.903	ENSPREG00000019821	trnau1apa	86	64.286	Poecilia_reticulata
ENSCLAG00000008223	TRNAU1AP	100	89.474	ENSPPYG00000001639	-	100	89.474	Pongo_abelii
ENSCLAG00000008223	TRNAU1AP	100	98.955	ENSPCOG00000027712	-	100	98.955	Propithecus_coquereli
ENSCLAG00000008223	TRNAU1AP	98	94.628	ENSPCOG00000023470	-	100	94.628	Propithecus_coquereli
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSPVAG00000017214	TRNAU1AP	100	98.606	Pteropus_vampyrus
ENSCLAG00000008223	TRNAU1AP	98	58.497	ENSPNYG00000010130	trnau1apa	98	58.984	Pundamilia_nyererei
ENSCLAG00000008223	TRNAU1AP	99	53.898	ENSPNAG00000024905	trnau1apa	94	53.103	Pygocentrus_nattereri
ENSCLAG00000008223	TRNAU1AP	94	90.406	ENSRNOG00000055344	Trnau1ap	92	90.406	Rattus_norvegicus
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSRBIG00000029083	TRNAU1AP	100	98.606	Rhinopithecus_bieti
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSRROG00000029128	TRNAU1AP	100	98.606	Rhinopithecus_roxellana
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSSBOG00000021299	TRNAU1AP	100	98.606	Saimiri_boliviensis_boliviensis
ENSCLAG00000008223	TRNAU1AP	100	94.774	ENSSHAG00000008108	TRNAU1AP	100	94.774	Sarcophilus_harrisii
ENSCLAG00000008223	TRNAU1AP	98	53.722	ENSSMAG00000020851	trnau1apa	98	57.049	Scophthalmus_maximus
ENSCLAG00000008223	TRNAU1AP	85	71.111	ENSSDUG00000011734	trnau1apa	94	57.483	Seriola_dumerili
ENSCLAG00000008223	TRNAU1AP	95	60.851	ENSSLDG00000012101	trnau1apa	92	60.851	Seriola_lalandi_dorsalis
ENSCLAG00000008223	TRNAU1AP	97	97.842	ENSSARG00000007536	TRNAU1AP	100	97.842	Sorex_araneus
ENSCLAG00000008223	TRNAU1AP	99	85.315	ENSSPUG00000010400	-	100	85.315	Sphenodon_punctatus
ENSCLAG00000008223	TRNAU1AP	61	80.682	ENSSPUG00000010415	-	100	80.682	Sphenodon_punctatus
ENSCLAG00000008223	TRNAU1AP	96	59.524	ENSSPAG00000005029	trnau1apa	98	57.980	Stegastes_partitus
ENSCLAG00000008223	TRNAU1AP	100	98.606	ENSSSCG00000030284	TRNAU1AP	100	98.606	Sus_scrofa
ENSCLAG00000008223	TRNAU1AP	68	53.061	ENSTGUG00000005908	-	100	53.061	Taeniopygia_guttata
ENSCLAG00000008223	TRNAU1AP	97	94.604	ENSTGUG00000000735	-	100	94.604	Taeniopygia_guttata
ENSCLAG00000008223	TRNAU1AP	98	58.804	ENSTRUG00000003352	trnau1apa	98	58.140	Takifugu_rubripes
ENSCLAG00000008223	TRNAU1AP	95	58.885	ENSTNIG00000006129	trnau1apa	98	56.766	Tetraodon_nigroviridis
ENSCLAG00000008223	TRNAU1AP	85	86.531	ENSTBEG00000008049	-	100	86.531	Tupaia_belangeri
ENSCLAG00000008223	TRNAU1AP	100	98.955	ENSTTRG00000001854	TRNAU1AP	100	98.955	Tursiops_truncatus
ENSCLAG00000008223	TRNAU1AP	95	98.175	ENSUAMG00000008789	TRNAU1AP	100	98.175	Ursus_americanus
ENSCLAG00000008223	TRNAU1AP	100	97.909	ENSUMAG00000011068	TRNAU1AP	100	97.909	Ursus_maritimus
ENSCLAG00000008223	TRNAU1AP	100	87.671	ENSVPAG00000006778	TRNAU1AP	100	87.671	Vicugna_pacos
ENSCLAG00000008223	TRNAU1AP	99	97.183	ENSVVUG00000012518	TRNAU1AP	93	97.183	Vulpes_vulpes
ENSCLAG00000008223	TRNAU1AP	95	55.903	ENSXMAG00000017361	trnau1apa	93	57.639	Xiphophorus_maculatus