EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000008260 (Gene tree)
Gene ID: 102024904
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 24491 bases
Position: chrJH721939.1:10692738-10717228
Accession: 102024904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000011969	zf-C3HC	PF07967.13	4.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000012110	ZC3HC1-201	1134	XM_013503268	ENSCLAP00000011969	377 (aa)	XP_013358722	-

Gene Model

Click here to download ENSCLAG00000008260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000008260's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000008260	ZC3HC1	99	67.102	ENSG00000091732	ZC3HC1	100	80.000	Homo_sapiens
ENSCLAG00000008260	ZC3HC1	93	32.371	ENSAPOG00000009078	zc3hc1	95	32.990	Acanthochromis_polyacanthus
ENSCLAG00000008260	ZC3HC1	100	60.792	ENSAMEG00000005425	ZC3HC1	100	62.302	Ailuropoda_melanoleuca
ENSCLAG00000008260	ZC3HC1	87	32.763	ENSACIG00000019513	zc3hc1	81	33.741	Amphilophus_citrinellus
ENSCLAG00000008260	ZC3HC1	88	40.223	ENSAOCG00000024310	zc3hc1	95	32.990	Amphiprion_ocellaris
ENSCLAG00000008260	ZC3HC1	88	40.223	ENSAPEG00000004907	zc3hc1	95	32.990	Amphiprion_percula
ENSCLAG00000008260	ZC3HC1	82	35.176	ENSATEG00000016898	zc3hc1	81	34.673	Anabas_testudineus
ENSCLAG00000008260	ZC3HC1	90	49.875	ENSAPLG00000003832	ZC3HC1	93	49.875	Anas_platyrhynchos
ENSCLAG00000008260	ZC3HC1	100	46.365	ENSACAG00000001638	ZC3HC1	100	45.776	Anolis_carolinensis
ENSCLAG00000008260	ZC3HC1	100	60.714	ENSANAG00000022213	ZC3HC1	96	84.500	Aotus_nancymaae
ENSCLAG00000008260	ZC3HC1	87	33.494	ENSACLG00000025033	zc3hc1	89	33.494	Astatotilapia_calliptera
ENSCLAG00000008260	ZC3HC1	86	37.037	ENSAMXG00000036792	zc3hc1	83	36.790	Astyanax_mexicanus
ENSCLAG00000008260	ZC3HC1	100	60.437	ENSBTAG00000011247	ZC3HC1	100	62.351	Bos_taurus
ENSCLAG00000008260	ZC3HC1	100	61.431	ENSCJAG00000010536	ZC3HC1	96	84.500	Callithrix_jacchus
ENSCLAG00000008260	ZC3HC1	100	60.870	ENSCAFG00000001499	-	99	60.990	Canis_familiaris
ENSCLAG00000008260	ZC3HC1	100	60.636	ENSCAFG00000028735	-	100	60.757	Canis_familiaris
ENSCLAG00000008260	ZC3HC1	100	60.636	ENSCAFG00000029401	-	99	60.757	Canis_familiaris
ENSCLAG00000008260	ZC3HC1	100	61.034	ENSCAFG00000031850	-	100	61.155	Canis_familiaris
ENSCLAG00000008260	ZC3HC1	100	60.835	ENSCAFG00020006829	-	100	60.956	Canis_lupus_dingo
ENSCLAG00000008260	ZC3HC1	100	60.990	ENSCAFG00020023333	-	100	61.111	Canis_lupus_dingo
ENSCLAG00000008260	ZC3HC1	100	58.078	ENSCHIG00000014103	ZC3HC1	100	59.714	Capra_hircus
ENSCLAG00000008260	ZC3HC1	100	61.034	ENSTSYG00000002843	ZC3HC1	100	62.550	Carlito_syrichta
ENSCLAG00000008260	ZC3HC1	88	65.847	ENSCAPG00000016300	ZC3HC1	91	65.847	Cavia_aperea
ENSCLAG00000008260	ZC3HC1	100	65.669	ENSCPOG00000014034	ZC3HC1	100	67.000	Cavia_porcellus
ENSCLAG00000008260	ZC3HC1	100	61.969	ENSCCAG00000020384	ZC3HC1	96	84.500	Cebus_capucinus
ENSCLAG00000008260	ZC3HC1	100	61.630	ENSCATG00000023130	ZC3HC1	100	63.147	Cercocebus_atys
ENSCLAG00000008260	ZC3HC1	76	62.125	ENSCSAG00000009881	ZC3HC1	97	63.934	Chlorocebus_sabaeus
ENSCLAG00000008260	ZC3HC1	88	64.878	ENSCHOG00000011846	ZC3HC1	91	64.390	Choloepus_hoffmanni
ENSCLAG00000008260	ZC3HC1	95	46.708	ENSCPBG00000017519	ZC3HC1	100	46.918	Chrysemys_picta_bellii
ENSCLAG00000008260	ZC3HC1	100	61.554	ENSCANG00000029091	ZC3HC1	96	84.500	Colobus_angolensis_palliatus
ENSCLAG00000008260	ZC3HC1	100	61.677	ENSCGRG00001018805	Zc3hc1	100	61.477	Cricetulus_griseus_chok1gshd
ENSCLAG00000008260	ZC3HC1	100	61.800	ENSCGRG00000017114	Zc3hc1	100	61.600	Cricetulus_griseus_crigri
ENSCLAG00000008260	ZC3HC1	88	32.134	ENSCSEG00000009284	zc3hc1	81	31.655	Cynoglossus_semilaevis
ENSCLAG00000008260	ZC3HC1	87	34.368	ENSCVAG00000011566	zc3hc1	82	33.890	Cyprinodon_variegatus
ENSCLAG00000008260	ZC3HC1	93	35.052	ENSDARG00000062651	zc3hc1	95	34.845	Danio_rerio
ENSCLAG00000008260	ZC3HC1	100	60.359	ENSDNOG00000045016	ZC3HC1	100	60.757	Dasypus_novemcinctus
ENSCLAG00000008260	ZC3HC1	100	63.656	ENSDORG00000008697	Zc3hc1	100	63.441	Dipodomys_ordii
ENSCLAG00000008260	ZC3HC1	88	62.954	ENSEASG00005008789	ZC3HC1	88	65.534	Equus_asinus_asinus
ENSCLAG00000008260	ZC3HC1	100	60.119	ENSECAG00000017886	ZC3HC1	100	61.829	Equus_caballus
ENSCLAG00000008260	ZC3HC1	90	75.309	ENSEEUG00000003123	ZC3HC1	84	76.543	Erinaceus_europaeus
ENSCLAG00000008260	ZC3HC1	80	43.169	ENSELUG00000023168	zc3hc1	82	35.963	Esox_lucius
ENSCLAG00000008260	ZC3HC1	100	61.034	ENSFCAG00000010429	ZC3HC1	100	62.749	Felis_catus
ENSCLAG00000008260	ZC3HC1	89	45.863	ENSFALG00000005006	ZC3HC1	91	46.336	Ficedula_albicollis
ENSCLAG00000008260	ZC3HC1	100	63.546	ENSFDAG00000019897	ZC3HC1	100	65.269	Fukomys_damarensis
ENSCLAG00000008260	ZC3HC1	88	34.988	ENSFHEG00000020149	zc3hc1	83	33.886	Fundulus_heteroclitus
ENSCLAG00000008260	ZC3HC1	87	32.212	ENSGMOG00000002914	zc3hc1	83	31.325	Gadus_morhua
ENSCLAG00000008260	ZC3HC1	99	46.465	ENSGALG00000008003	ZC3HC1	99	46.061	Gallus_gallus
ENSCLAG00000008260	ZC3HC1	88	34.906	ENSGAFG00000016095	zc3hc1	83	33.726	Gambusia_affinis
ENSCLAG00000008260	ZC3HC1	87	35.731	ENSGACG00000019706	zc3hc1	82	35.252	Gasterosteus_aculeatus
ENSCLAG00000008260	ZC3HC1	82	49.745	ENSGAGG00000016106	ZC3HC1	100	50.384	Gopherus_agassizii
ENSCLAG00000008260	ZC3HC1	99	61.355	ENSGGOG00000015504	ZC3HC1	96	85.427	Gorilla_gorilla
ENSCLAG00000008260	ZC3HC1	87	33.575	ENSHBUG00000008347	zc3hc1	82	33.575	Haplochromis_burtoni
ENSCLAG00000008260	ZC3HC1	100	64.940	ENSHGLG00000005085	ZC3HC1	100	65.538	Heterocephalus_glaber_female
ENSCLAG00000008260	ZC3HC1	100	64.741	ENSHGLG00100011395	ZC3HC1	100	65.339	Heterocephalus_glaber_male
ENSCLAG00000008260	ZC3HC1	100	64.378	ENSSTOG00000023599	-	100	66.022	Ictidomys_tridecemlineatus
ENSCLAG00000008260	ZC3HC1	87	34.293	ENSKMAG00000015315	zc3hc1	76	33.654	Kryptolebias_marmoratus
ENSCLAG00000008260	ZC3HC1	87	32.304	ENSLBEG00000017325	zc3hc1	87	31.354	Labrus_bergylta
ENSCLAG00000008260	ZC3HC1	72	37.408	ENSLACG00000013032	ZC3HC1	98	37.288	Latimeria_chalumnae
ENSCLAG00000008260	ZC3HC1	99	38.492	ENSLOCG00000015963	zc3hc1	99	38.124	Lepisosteus_oculatus
ENSCLAG00000008260	ZC3HC1	100	60.750	ENSLAFG00000001292	ZC3HC1	100	62.055	Loxodonta_africana
ENSCLAG00000008260	ZC3HC1	100	62.028	ENSMFAG00000030176	ZC3HC1	100	63.546	Macaca_fascicularis
ENSCLAG00000008260	ZC3HC1	100	61.706	ENSMMUG00000006155	ZC3HC1	100	63.221	Macaca_mulatta
ENSCLAG00000008260	ZC3HC1	100	62.028	ENSMNEG00000011833	ZC3HC1	95	85.149	Macaca_nemestrina
ENSCLAG00000008260	ZC3HC1	100	61.829	ENSMLEG00000027328	ZC3HC1	96	85.000	Mandrillus_leucophaeus
ENSCLAG00000008260	ZC3HC1	94	32.245	ENSMAMG00000010691	zc3hc1	96	32.653	Mastacembelus_armatus
ENSCLAG00000008260	ZC3HC1	87	33.575	ENSMZEG00005007142	zc3hc1	82	33.575	Maylandia_zebra
ENSCLAG00000008260	ZC3HC1	99	46.108	ENSMGAG00000002977	ZC3HC1	99	47.106	Meleagris_gallopavo
ENSCLAG00000008260	ZC3HC1	88	58.696	ENSMAUG00000017032	Zc3hc1	92	61.194	Mesocricetus_auratus
ENSCLAG00000008260	ZC3HC1	90	74.561	ENSMICG00000009167	ZC3HC1	100	74.561	Microcebus_murinus
ENSCLAG00000008260	ZC3HC1	100	59.761	ENSMOCG00000015239	Zc3hc1	100	71.053	Microtus_ochrogaster
ENSCLAG00000008260	ZC3HC1	88	32.847	ENSMMOG00000002204	zc3hc1	94	31.630	Mola_mola
ENSCLAG00000008260	ZC3HC1	100	50.526	ENSMODG00000014630	ZC3HC1	100	50.737	Monodelphis_domestica
ENSCLAG00000008260	ZC3HC1	86	33.652	ENSMALG00000014447	zc3hc1	96	31.687	Monopterus_albus
ENSCLAG00000008260	ZC3HC1	100	63.181	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	63.537	Mus_caroli
ENSCLAG00000008260	ZC3HC1	100	63.261	ENSMUSG00000039130	Zc3hc1	100	63.617	Mus_musculus
ENSCLAG00000008260	ZC3HC1	100	62.132	MGP_PahariEiJ_G0021941	Zc3hc1	100	70.175	Mus_pahari
ENSCLAG00000008260	ZC3HC1	100	63.261	MGP_SPRETEiJ_G0029183	Zc3hc1	100	63.617	Mus_spretus
ENSCLAG00000008260	ZC3HC1	94	59.167	ENSMPUG00000005297	ZC3HC1	95	60.960	Mustela_putorius_furo
ENSCLAG00000008260	ZC3HC1	60	62.816	ENSMLUG00000029228	-	81	63.441	Myotis_lucifugus
ENSCLAG00000008260	ZC3HC1	100	59.802	ENSMLUG00000000063	-	100	59.921	Myotis_lucifugus
ENSCLAG00000008260	ZC3HC1	100	60.040	ENSNGAG00000019014	Zc3hc1	100	69.565	Nannospalax_galili
ENSCLAG00000008260	ZC3HC1	87	32.688	ENSNBRG00000004577	zc3hc1	82	33.656	Neolamprologus_brichardi
ENSCLAG00000008260	ZC3HC1	99	60.159	ENSNLEG00000012698	ZC3HC1	99	61.876	Nomascus_leucogenys
ENSCLAG00000008260	ZC3HC1	100	54.382	ENSMEUG00000011023	ZC3HC1	100	54.582	Notamacropus_eugenii
ENSCLAG00000008260	ZC3HC1	65	61.194	ENSOPRG00000007867	-	68	61.194	Ochotona_princeps
ENSCLAG00000008260	ZC3HC1	100	65.800	ENSODEG00000014604	ZC3HC1	100	67.200	Octodon_degus
ENSCLAG00000008260	ZC3HC1	87	33.333	ENSONIG00000011644	zc3hc1	82	34.300	Oreochromis_niloticus
ENSCLAG00000008260	ZC3HC1	88	50.000	ENSOANG00000011460	ZC3HC1	91	49.286	Ornithorhynchus_anatinus
ENSCLAG00000008260	ZC3HC1	100	58.614	ENSOCUG00000017137	ZC3HC1	100	60.198	Oryctolagus_cuniculus
ENSCLAG00000008260	ZC3HC1	94	30.143	ENSORLG00020015874	zc3hc1	95	30.658	Oryzias_latipes_hni
ENSCLAG00000008260	ZC3HC1	94	30.143	ENSORLG00015014641	zc3hc1	95	30.453	Oryzias_latipes_hsok
ENSCLAG00000008260	ZC3HC1	94	32.981	ENSOMEG00000000215	zc3hc1	96	33.615	Oryzias_melastigma
ENSCLAG00000008260	ZC3HC1	94	32.981	ENSOMEG00000020604	zc3hc1	96	33.615	Oryzias_melastigma
ENSCLAG00000008260	ZC3HC1	100	56.088	ENSOGAG00000026193	ZC3HC1	100	57.200	Otolemur_garnettii
ENSCLAG00000008260	ZC3HC1	100	60.474	ENSOARG00000004907	ZC3HC1	99	62.376	Ovis_aries
ENSCLAG00000008260	ZC3HC1	99	61.355	ENSPPAG00000043172	ZC3HC1	96	85.427	Pan_paniscus
ENSCLAG00000008260	ZC3HC1	100	60.239	ENSPPRG00000001004	ZC3HC1	100	61.952	Panthera_pardus
ENSCLAG00000008260	ZC3HC1	100	60.835	ENSPTIG00000007823	ZC3HC1	100	62.550	Panthera_tigris_altaica
ENSCLAG00000008260	ZC3HC1	99	61.355	ENSPTRG00000019685	ZC3HC1	96	85.427	Pan_troglodytes
ENSCLAG00000008260	ZC3HC1	100	61.706	ENSPANG00000014229	ZC3HC1	96	85.000	Papio_anubis
ENSCLAG00000008260	ZC3HC1	93	36.345	ENSPKIG00000007172	zc3hc1	95	35.307	Paramormyrops_kingsleyae
ENSCLAG00000008260	ZC3HC1	88	45.176	ENSPSIG00000016646	ZC3HC1	82	45.991	Pelodiscus_sinensis
ENSCLAG00000008260	ZC3HC1	94	31.311	ENSPMGG00000003548	zc3hc1	96	30.467	Periophthalmus_magnuspinnatus
ENSCLAG00000008260	ZC3HC1	100	59.562	ENSPEMG00000000514	Zc3hc1	100	60.479	Peromyscus_maniculatus_bairdii
ENSCLAG00000008260	ZC3HC1	96	56.448	ENSPCIG00000020619	ZC3HC1	100	58.355	Phascolarctos_cinereus
ENSCLAG00000008260	ZC3HC1	99	32.016	ENSPFOG00000003466	zc3hc1	99	31.225	Poecilia_formosa
ENSCLAG00000008260	ZC3HC1	99	32.283	ENSPLAG00000022211	zc3hc1	99	31.496	Poecilia_latipinna
ENSCLAG00000008260	ZC3HC1	88	34.670	ENSPMEG00000001458	zc3hc1	99	31.164	Poecilia_mexicana
ENSCLAG00000008260	ZC3HC1	88	34.353	ENSPREG00000004004	zc3hc1	99	31.102	Poecilia_reticulata
ENSCLAG00000008260	ZC3HC1	99	63.312	ENSPPYG00000017998	ZC3HC1	99	66.524	Pongo_abelii
ENSCLAG00000008260	ZC3HC1	88	63.592	ENSPCAG00000001182	ZC3HC1	90	63.592	Procavia_capensis
ENSCLAG00000008260	ZC3HC1	90	74.561	ENSPCOG00000017354	ZC3HC1	100	63.147	Propithecus_coquereli
ENSCLAG00000008260	ZC3HC1	100	59.600	ENSPVAG00000003195	ZC3HC1	100	60.120	Pteropus_vampyrus
ENSCLAG00000008260	ZC3HC1	87	33.575	ENSPNYG00000020692	zc3hc1	82	33.575	Pundamilia_nyererei
ENSCLAG00000008260	ZC3HC1	91	32.189	ENSPNAG00000020746	zc3hc1	95	32.403	Pygocentrus_nattereri
ENSCLAG00000008260	ZC3HC1	100	59.163	ENSRNOG00000010154	Zc3hc1	100	58.566	Rattus_norvegicus
ENSCLAG00000008260	ZC3HC1	88	65.133	ENSRBIG00000029409	ZC3HC1	94	85.204	Rhinopithecus_bieti
ENSCLAG00000008260	ZC3HC1	100	61.431	ENSRROG00000041831	ZC3HC1	94	85.204	Rhinopithecus_roxellana
ENSCLAG00000008260	ZC3HC1	100	61.884	ENSSBOG00000032787	ZC3HC1	96	85.000	Saimiri_boliviensis_boliviensis
ENSCLAG00000008260	ZC3HC1	88	59.709	ENSSHAG00000002529	ZC3HC1	89	59.951	Sarcophilus_harrisii
ENSCLAG00000008260	ZC3HC1	93	36.157	ENSSFOG00015003667	zc3hc1	91	35.270	Scleropages_formosus
ENSCLAG00000008260	ZC3HC1	88	32.134	ENSSMAG00000000647	zc3hc1	74	35.377	Scophthalmus_maximus
ENSCLAG00000008260	ZC3HC1	87	33.654	ENSSDUG00000004241	zc3hc1	94	31.070	Seriola_dumerili
ENSCLAG00000008260	ZC3HC1	94	31.902	ENSSLDG00000025056	zc3hc1	94	32.377	Seriola_lalandi_dorsalis
ENSCLAG00000008260	ZC3HC1	99	54.491	ENSSARG00000012013	ZC3HC1	82	67.029	Sorex_araneus
ENSCLAG00000008260	ZC3HC1	82	53.276	ENSSPUG00000000778	ZC3HC1	77	52.707	Sphenodon_punctatus
ENSCLAG00000008260	ZC3HC1	93	32.990	ENSSPAG00000020041	zc3hc1	95	33.608	Stegastes_partitus
ENSCLAG00000008260	ZC3HC1	100	61.677	ENSSSCG00000016565	ZC3HC1	100	65.206	Sus_scrofa
ENSCLAG00000008260	ZC3HC1	54	56.522	ENSTGUG00000016262	ZC3HC1	83	57.971	Taeniopygia_guttata
ENSCLAG00000008260	ZC3HC1	88	34.293	ENSTRUG00000020077	zc3hc1	83	34.053	Takifugu_rubripes
ENSCLAG00000008260	ZC3HC1	88	33.175	ENSTNIG00000007585	zc3hc1	87	32.771	Tetraodon_nigroviridis
ENSCLAG00000008260	ZC3HC1	96	60.759	ENSTBEG00000005216	ZC3HC1	88	60.759	Tupaia_belangeri
ENSCLAG00000008260	ZC3HC1	94	60.334	ENSTTRG00000008458	ZC3HC1	100	62.213	Tursiops_truncatus
ENSCLAG00000008260	ZC3HC1	100	61.355	ENSUAMG00000020249	ZC3HC1	100	62.550	Ursus_americanus
ENSCLAG00000008260	ZC3HC1	100	60.757	ENSUMAG00000009268	ZC3HC1	100	61.952	Ursus_maritimus
ENSCLAG00000008260	ZC3HC1	70	87.755	ENSVPAG00000010846	ZC3HC1	59	87.755	Vicugna_pacos
ENSCLAG00000008260	ZC3HC1	94	59.044	ENSVVUG00000012386	ZC3HC1	99	59.167	Vulpes_vulpes
ENSCLAG00000008260	ZC3HC1	89	38.745	ENSXETG00000033900	zc3hc1	95	37.744	Xenopus_tropicalis
ENSCLAG00000008260	ZC3HC1	99	32.277	ENSXCOG00000013570	zc3hc1	99	31.683	Xiphophorus_couchianus
ENSCLAG00000008260	ZC3HC1	88	35.059	ENSXMAG00000010979	zc3hc1	89	34.118	Xiphophorus_maculatus