EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000008380 (Gene tree)
Gene ID: 102026112
Gene Symbol: SFSWAP
Alias: SFRS8|SWAP
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 62771 bases
Position: chrJH721942.1:808632-871402
Accession: 102026112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000012152	DRY_EERY	PF09750.9	6e-33	1	1
ENSCLAP00000012152	Surp	PF01805.20	4.6e-27	1	2
ENSCLAP00000012152	Surp	PF01805.20	4.6e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000012293	SFSWAP-201	3367	XM_005402976	ENSCLAP00000012152	948 (aa)	XP_005403033	-

Gene Model

Click here to download ENSCLAG00000008380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000008380's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000008380	SFSWAP	100	91.272	ENSG00000061936	SFSWAP	100	91.693	Homo_sapiens
ENSCLAG00000008380	SFSWAP	74	59.034	ENSAPOG00000005784	sfswap	92	65.394	Acanthochromis_polyacanthus
ENSCLAG00000008380	SFSWAP	100	85.865	ENSAMEG00000013818	SFSWAP	100	86.392	Ailuropoda_melanoleuca
ENSCLAG00000008380	SFSWAP	71	59.371	ENSAOCG00000016469	sfswap	97	52.870	Amphiprion_ocellaris
ENSCLAG00000008380	SFSWAP	71	60.576	ENSAPEG00000004965	sfswap	97	53.084	Amphiprion_percula
ENSCLAG00000008380	SFSWAP	73	59.048	ENSATEG00000021053	sfswap	93	62.935	Anabas_testudineus
ENSCLAG00000008380	SFSWAP	100	78.033	ENSAPLG00000013808	SFSWAP	97	79.374	Anas_platyrhynchos
ENSCLAG00000008380	SFSWAP	93	73.356	ENSACAG00000007220	SFSWAP	100	71.924	Anolis_carolinensis
ENSCLAG00000008380	SFSWAP	100	92.105	ENSANAG00000001518	SFSWAP	100	91.895	Aotus_nancymaae
ENSCLAG00000008380	SFSWAP	100	89.662	ENSBTAG00000000439	SFSWAP	100	89.662	Bos_taurus
ENSCLAG00000008380	SFSWAP	100	91.675	ENSCJAG00000003613	SFSWAP	100	91.465	Callithrix_jacchus
ENSCLAG00000008380	SFSWAP	100	88.502	ENSCAFG00000006625	SFSWAP	100	87.975	Canis_familiaris
ENSCLAG00000008380	SFSWAP	87	81.242	ENSCAFG00020011254	SFSWAP	99	80.025	Canis_lupus_dingo
ENSCLAG00000008380	SFSWAP	100	89.557	ENSCHIG00000008838	SFSWAP	100	89.557	Capra_hircus
ENSCLAG00000008380	SFSWAP	100	91.667	ENSTSYG00000010303	SFSWAP	100	91.667	Carlito_syrichta
ENSCLAG00000008380	SFSWAP	92	96.237	ENSCAPG00000004394	SFSWAP	96	96.237	Cavia_aperea
ENSCLAG00000008380	SFSWAP	100	96.628	ENSCPOG00000005280	SFSWAP	100	96.628	Cavia_porcellus
ENSCLAG00000008380	SFSWAP	100	91.465	ENSCCAG00000037255	SFSWAP	100	91.675	Cebus_capucinus
ENSCLAG00000008380	SFSWAP	100	92.300	ENSCATG00000031094	SFSWAP	100	92.300	Cercocebus_atys
ENSCLAG00000008380	SFSWAP	100	92.300	ENSCSAG00000001884	SFSWAP	100	92.300	Chlorocebus_sabaeus
ENSCLAG00000008380	SFSWAP	92	74.487	ENSCHOG00000003578	SFSWAP	100	74.487	Choloepus_hoffmanni
ENSCLAG00000008380	SFSWAP	100	73.521	ENSCPBG00000024757	SFSWAP	98	74.949	Chrysemys_picta_bellii
ENSCLAG00000008380	SFSWAP	100	92.194	ENSCANG00000036501	SFSWAP	100	92.194	Colobus_angolensis_palliatus
ENSCLAG00000008380	SFSWAP	100	91.561	ENSCGRG00001011284	Sfswap	100	91.456	Cricetulus_griseus_chok1gshd
ENSCLAG00000008380	SFSWAP	100	91.561	ENSCGRG00000017417	Sfswap	100	91.456	Cricetulus_griseus_crigri
ENSCLAG00000008380	SFSWAP	70	60.519	ENSCSEG00000003773	sfswap	99	51.559	Cynoglossus_semilaevis
ENSCLAG00000008380	SFSWAP	99	55.237	ENSDARG00000005980	sfswap	99	55.665	Danio_rerio
ENSCLAG00000008380	SFSWAP	85	88.667	ENSDNOG00000018742	SFSWAP	100	87.719	Dasypus_novemcinctus
ENSCLAG00000008380	SFSWAP	97	84.096	ENSDORG00000010352	Sfswap	99	84.314	Dipodomys_ordii
ENSCLAG00000008380	SFSWAP	51	46.610	FBgn0003638	su(w[a])	56	55.556	Drosophila_melanogaster
ENSCLAG00000008380	SFSWAP	86	70.034	ENSETEG00000016657	-	91	71.044	Echinops_telfairi
ENSCLAG00000008380	SFSWAP	84	38.428	ENSEBUG00000016748	SFSWAP	99	37.621	Eptatretus_burgeri
ENSCLAG00000008380	SFSWAP	100	90.295	ENSEASG00005016502	SFSWAP	100	90.295	Equus_asinus_asinus
ENSCLAG00000008380	SFSWAP	98	90.076	ENSECAG00000007657	SFSWAP	99	90.076	Equus_caballus
ENSCLAG00000008380	SFSWAP	86	72.372	ENSEEUG00000001713	SFSWAP	99	72.672	Erinaceus_europaeus
ENSCLAG00000008380	SFSWAP	100	52.541	ENSELUG00000010942	sfswap	90	63.614	Esox_lucius
ENSCLAG00000008380	SFSWAP	100	88.819	ENSFCAG00000010778	SFSWAP	100	88.608	Felis_catus
ENSCLAG00000008380	SFSWAP	97	78.533	ENSFALG00000009577	SFSWAP	96	78.209	Ficedula_albicollis
ENSCLAG00000008380	SFSWAP	100	96.008	ENSFDAG00000017235	SFSWAP	100	96.008	Fukomys_damarensis
ENSCLAG00000008380	SFSWAP	97	70.918	ENSGALG00000002487	SFSWAP	97	78.602	Gallus_gallus
ENSCLAG00000008380	SFSWAP	74	57.799	ENSGAFG00000006272	sfswap	51	50.096	Gambusia_affinis
ENSCLAG00000008380	SFSWAP	77	70.588	ENSGACG00000017647	sfswap	99	54.877	Gasterosteus_aculeatus
ENSCLAG00000008380	SFSWAP	100	73.869	ENSGAGG00000002611	SFSWAP	98	75.510	Gopherus_agassizii
ENSCLAG00000008380	SFSWAP	100	91.693	ENSGGOG00000014877	SFSWAP	100	92.008	Gorilla_gorilla
ENSCLAG00000008380	SFSWAP	100	96.308	ENSHGLG00000019216	SFSWAP	100	96.308	Heterocephalus_glaber_female
ENSCLAG00000008380	SFSWAP	100	95.886	ENSHGLG00100019350	SFSWAP	100	95.886	Heterocephalus_glaber_male
ENSCLAG00000008380	SFSWAP	71	57.670	ENSHCOG00000009475	sfswap	97	51.939	Hippocampus_comes
ENSCLAG00000008380	SFSWAP	98	55.680	ENSIPUG00000010598	sfswap	60	66.089	Ictalurus_punctatus
ENSCLAG00000008380	SFSWAP	100	91.992	ENSSTOG00000000773	SFSWAP	100	92.624	Ictidomys_tridecemlineatus
ENSCLAG00000008380	SFSWAP	100	90.190	ENSJJAG00000006609	Sfswap	100	90.506	Jaculus_jaculus
ENSCLAG00000008380	SFSWAP	75	55.764	ENSKMAG00000013168	sfswap	93	62.626	Kryptolebias_marmoratus
ENSCLAG00000008380	SFSWAP	73	57.083	ENSLBEG00000010239	sfswap	74	58.592	Labrus_bergylta
ENSCLAG00000008380	SFSWAP	100	64.882	ENSLACG00000018678	SFSWAP	96	66.489	Latimeria_chalumnae
ENSCLAG00000008380	SFSWAP	51	58.429	ENSLOCG00000006202	sfswap	99	60.040	Lepisosteus_oculatus
ENSCLAG00000008380	SFSWAP	92	86.902	ENSLAFG00000014462	SFSWAP	100	87.244	Loxodonta_africana
ENSCLAG00000008380	SFSWAP	98	92.017	ENSMFAG00000037352	SFSWAP	85	92.017	Macaca_fascicularis
ENSCLAG00000008380	SFSWAP	100	92.089	ENSMMUG00000020343	SFSWAP	100	92.089	Macaca_mulatta
ENSCLAG00000008380	SFSWAP	100	92.089	ENSMNEG00000041002	SFSWAP	100	92.089	Macaca_nemestrina
ENSCLAG00000008380	SFSWAP	100	90.295	ENSMLEG00000035728	SFSWAP	100	90.190	Mandrillus_leucophaeus
ENSCLAG00000008380	SFSWAP	97	70.234	ENSMGAG00000002191	SFSWAP	97	71.037	Meleagris_gallopavo
ENSCLAG00000008380	SFSWAP	100	91.992	ENSMICG00000004465	SFSWAP	100	92.097	Microcebus_murinus
ENSCLAG00000008380	SFSWAP	100	90.506	ENSMOCG00000014390	Sfswap	100	90.401	Microtus_ochrogaster
ENSCLAG00000008380	SFSWAP	99	74.974	ENSMODG00000015581	SFSWAP	99	73.520	Monodelphis_domestica
ENSCLAG00000008380	SFSWAP	71	60.426	ENSMALG00000012603	sfswap	99	50.051	Monopterus_albus
ENSCLAG00000008380	SFSWAP	100	90.401	MGP_CAROLIEiJ_G0027780	Sfswap	94	96.491	Mus_caroli
ENSCLAG00000008380	SFSWAP	100	90.295	ENSMUSG00000029439	Sfswap	94	96.491	Mus_musculus
ENSCLAG00000008380	SFSWAP	100	89.905	MGP_PahariEiJ_G0024360	Sfswap	94	97.368	Mus_pahari
ENSCLAG00000008380	SFSWAP	100	90.084	MGP_SPRETEiJ_G0028779	Sfswap	94	96.491	Mus_spretus
ENSCLAG00000008380	SFSWAP	100	87.764	ENSMPUG00000002218	SFSWAP	100	87.658	Mustela_putorius_furo
ENSCLAG00000008380	SFSWAP	89	81.069	ENSMLUG00000011296	SFSWAP	100	80.067	Myotis_lucifugus
ENSCLAG00000008380	SFSWAP	100	90.506	ENSNGAG00000018167	Sfswap	100	90.928	Nannospalax_galili
ENSCLAG00000008380	SFSWAP	100	89.368	ENSNLEG00000008386	SFSWAP	100	89.368	Nomascus_leucogenys
ENSCLAG00000008380	SFSWAP	71	87.681	ENSMEUG00000009556	-	80	87.681	Notamacropus_eugenii
ENSCLAG00000008380	SFSWAP	100	74.238	ENSOPRG00000006983	-	100	74.658	Ochotona_princeps
ENSCLAG00000008380	SFSWAP	100	96.941	ENSODEG00000008020	SFSWAP	100	96.941	Octodon_degus
ENSCLAG00000008380	SFSWAP	96	52.674	ENSONIG00000003757	sfswap	99	52.590	Oreochromis_niloticus
ENSCLAG00000008380	SFSWAP	92	82.574	ENSOANG00000013861	SFSWAP	100	83.941	Ornithorhynchus_anatinus
ENSCLAG00000008380	SFSWAP	100	86.880	ENSOCUG00000002165	SFSWAP	100	85.950	Oryctolagus_cuniculus
ENSCLAG00000008380	SFSWAP	89	91.736	ENSOGAG00000016724	SFSWAP	99	91.736	Otolemur_garnettii
ENSCLAG00000008380	SFSWAP	100	89.053	ENSOARG00000014314	SFSWAP	100	89.053	Ovis_aries
ENSCLAG00000008380	SFSWAP	100	91.588	ENSPPAG00000036706	SFSWAP	100	91.903	Pan_paniscus
ENSCLAG00000008380	SFSWAP	100	80.422	ENSPPRG00000017318	SFSWAP	100	79.819	Panthera_pardus
ENSCLAG00000008380	SFSWAP	99	76.898	ENSPTIG00000004304	SFSWAP	97	88.000	Panthera_tigris_altaica
ENSCLAG00000008380	SFSWAP	100	91.693	ENSPTRG00000005640	SFSWAP	100	92.008	Pan_troglodytes
ENSCLAG00000008380	SFSWAP	100	92.300	ENSPANG00000019737	SFSWAP	100	92.300	Papio_anubis
ENSCLAG00000008380	SFSWAP	72	61.972	ENSPKIG00000008327	sfswap	100	55.500	Paramormyrops_kingsleyae
ENSCLAG00000008380	SFSWAP	61	61.076	ENSPSIG00000017807	SFSWAP	100	67.610	Pelodiscus_sinensis
ENSCLAG00000008380	SFSWAP	100	90.622	ENSPEMG00000001237	Sfswap	100	90.516	Peromyscus_maniculatus_bairdii
ENSCLAG00000008380	SFSWAP	97	80.477	ENSPCIG00000006062	SFSWAP	99	77.343	Phascolarctos_cinereus
ENSCLAG00000008380	SFSWAP	76	57.867	ENSPLAG00000008513	sfswap	92	63.119	Poecilia_latipinna
ENSCLAG00000008380	SFSWAP	75	58.219	ENSPREG00000006692	sfswap	94	62.469	Poecilia_reticulata
ENSCLAG00000008380	SFSWAP	98	91.318	ENSPPYG00000005129	SFSWAP	100	91.533	Pongo_abelii
ENSCLAG00000008380	SFSWAP	58	87.500	ENSPCAG00000004977	-	65	87.500	Procavia_capensis
ENSCLAG00000008380	SFSWAP	100	92.616	ENSPCOG00000023786	SFSWAP	100	92.616	Propithecus_coquereli
ENSCLAG00000008380	SFSWAP	92	87.805	ENSPVAG00000014918	SFSWAP	92	88.153	Pteropus_vampyrus
ENSCLAG00000008380	SFSWAP	75	58.537	ENSPNYG00000012660	sfswap	58	64.631	Pundamilia_nyererei
ENSCLAG00000008380	SFSWAP	100	87.553	ENSRNOG00000000931	Sfswap	100	87.975	Rattus_norvegicus
ENSCLAG00000008380	SFSWAP	100	85.232	ENSRBIG00000036330	SFSWAP	100	85.865	Rhinopithecus_bieti
ENSCLAG00000008380	SFSWAP	100	91.878	ENSRROG00000032001	SFSWAP	100	91.878	Rhinopithecus_roxellana
ENSCLAG00000008380	SFSWAP	100	91.570	ENSSBOG00000026217	SFSWAP	100	91.781	Saimiri_boliviensis_boliviensis
ENSCLAG00000008380	SFSWAP	92	81.921	ENSSHAG00000014232	SFSWAP	100	82.712	Sarcophilus_harrisii
ENSCLAG00000008380	SFSWAP	96	57.293	ENSSFOG00015000766	sfswap	97	57.305	Scleropages_formosus
ENSCLAG00000008380	SFSWAP	71	61.441	ENSSLDG00000010835	sfswap	56	67.725	Seriola_lalandi_dorsalis
ENSCLAG00000008380	SFSWAP	78	85.491	ENSSARG00000000424	SFSWAP	85	85.491	Sorex_araneus
ENSCLAG00000008380	SFSWAP	87	74.489	ENSSPUG00000010272	SFSWAP	99	75.061	Sphenodon_punctatus
ENSCLAG00000008380	SFSWAP	72	60.367	ENSSPAG00000014310	sfswap	90	67.292	Stegastes_partitus
ENSCLAG00000008380	SFSWAP	100	89.684	ENSSSCG00000009744	SFSWAP	100	89.474	Sus_scrofa
ENSCLAG00000008380	SFSWAP	97	77.922	ENSTGUG00000004623	SFSWAP	99	78.139	Taeniopygia_guttata
ENSCLAG00000008380	SFSWAP	54	93.750	ENSTBEG00000004983	-	64	93.750	Tupaia_belangeri
ENSCLAG00000008380	SFSWAP	100	79.706	ENSTTRG00000013478	SFSWAP	100	79.706	Tursiops_truncatus
ENSCLAG00000008380	SFSWAP	100	86.603	ENSUAMG00000016807	SFSWAP	100	87.025	Ursus_americanus
ENSCLAG00000008380	SFSWAP	90	82.084	ENSUMAG00000002957	SFSWAP	91	82.310	Ursus_maritimus
ENSCLAG00000008380	SFSWAP	56	92.248	ENSVPAG00000010479	-	65	91.870	Vicugna_pacos
ENSCLAG00000008380	SFSWAP	100	88.502	ENSVVUG00000010753	SFSWAP	100	87.975	Vulpes_vulpes
ENSCLAG00000008380	SFSWAP	97	60.202	ENSXETG00000009350	sfswap	94	65.331	Xenopus_tropicalis