EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000008579 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 2606 bases
Position: chrJH721918.1:1725730-1728335
Accession: 102013146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000012415	zf-U11-48K	PF05253.12	7e-15	1	2
ENSCLAP00000012415	zf-U11-48K	PF05253.12	7e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000012560	-	441	XM_013520795	ENSCLAP00000012415	147 (aa)	XP_013376249	-

Gene Model

Click here to download ENSCLAG00000008579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000008579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000008579	-	80	33.333	ENSCLAG00000012811	GTSF1	69	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000008579	-	100	74.150	ENSAMEG00000000958	-	96	74.150	Ailuropoda_melanoleuca
ENSCLAG00000008579	-	100	72.109	ENSCAFG00000006463	-	95	72.109	Canis_familiaris
ENSCLAG00000008579	-	100	72.109	ENSCAFG00020020371	-	93	72.109	Canis_lupus_dingo
ENSCLAG00000008579	-	100	82.993	ENSCPOG00000023851	-	97	82.993	Cavia_porcellus
ENSCLAG00000008579	-	95	66.906	ENSCGRG00001016136	Gtsf2	90	66.906	Cricetulus_griseus_chok1gshd
ENSCLAG00000008579	-	95	66.906	ENSCGRG00000012950	Gtsf2	90	66.906	Cricetulus_griseus_crigri
ENSCLAG00000008579	-	100	70.068	ENSDORG00000026087	Gtsf2	95	70.068	Dipodomys_ordii
ENSCLAG00000008579	-	72	64.486	ENSEASG00005010262	-	98	64.486	Equus_asinus_asinus
ENSCLAG00000008579	-	72	69.811	ENSECAG00000014413	-	98	69.811	Equus_caballus
ENSCLAG00000008579	-	72	75.472	ENSFCAG00000031316	-	91	75.472	Felis_catus
ENSCLAG00000008579	-	100	77.551	ENSFDAG00000019555	-	97	77.551	Fukomys_damarensis
ENSCLAG00000008579	-	97	79.577	ENSHGLG00000002798	-	95	78.231	Heterocephalus_glaber_female
ENSCLAG00000008579	-	97	79.577	ENSHGLG00100012359	-	95	78.231	Heterocephalus_glaber_male
ENSCLAG00000008579	-	100	69.388	ENSSTOG00000030158	-	97	69.388	Ictidomys_tridecemlineatus
ENSCLAG00000008579	-	100	62.585	ENSJJAG00000016320	Gtsf2	95	62.585	Jaculus_jaculus
ENSCLAG00000008579	-	57	71.429	ENSMAUG00000014687	-	92	71.429	Mesocricetus_auratus
ENSCLAG00000008579	-	97	66.197	ENSMAUG00000017189	-	87	66.197	Mesocricetus_auratus
ENSCLAG00000008579	-	92	67.407	ENSMOCG00000014770	Gtsf2	89	67.407	Microtus_ochrogaster
ENSCLAG00000008579	-	100	64.626	MGP_CAROLIEiJ_G0020380	Gtsf2	95	64.626	Mus_caroli
ENSCLAG00000008579	-	100	63.946	ENSMUSG00000053508	Gtsf2	95	63.946	Mus_musculus
ENSCLAG00000008579	-	100	63.265	MGP_PahariEiJ_G0020379	Gtsf2	95	63.265	Mus_pahari
ENSCLAG00000008579	-	100	63.946	MGP_SPRETEiJ_G0021273	Gtsf2	95	63.946	Mus_spretus
ENSCLAG00000008579	-	100	73.469	ENSMPUG00000005664	-	95	73.469	Mustela_putorius_furo
ENSCLAG00000008579	-	100	62.585	ENSNGAG00000008752	Gtsf2	95	62.585	Nannospalax_galili
ENSCLAG00000008579	-	94	84.783	ENSODEG00000013228	-	98	81.633	Octodon_degus
ENSCLAG00000008579	-	86	75.591	ENSPPRG00000004157	-	99	75.591	Panthera_pardus
ENSCLAG00000008579	-	86	75.591	ENSPTIG00000020670	-	99	75.591	Panthera_tigris_altaica
ENSCLAG00000008579	-	97	66.197	ENSPEMG00000010828	-	92	66.197	Peromyscus_maniculatus_bairdii
ENSCLAG00000008579	-	95	63.571	ENSPEMG00000014641	-	99	60.714	Peromyscus_maniculatus_bairdii
ENSCLAG00000008579	-	97	66.901	ENSRNOG00000036830	RGD1563200	92	66.901	Rattus_norvegicus
ENSCLAG00000008579	-	100	57.823	ENSSSCG00000000296	-	88	57.823	Sus_scrofa
ENSCLAG00000008579	-	71	78.846	ENSUAMG00000021668	-	95	78.846	Ursus_americanus
ENSCLAG00000008579	-	71	78.846	ENSUMAG00000011281	-	95	78.846	Ursus_maritimus
ENSCLAG00000008579	-	72	76.415	ENSVVUG00000023684	-	97	76.415	Vulpes_vulpes