EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000008623 (Gene tree)
Gene ID: 102009549
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 231359 bases
Position: chrJH721901.1:12375565-12606923
Accession: 102009549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000012474	S1	PF00575.23	1.3e-09	1	1
ENSCLAP00000012473	S1	PF00575.23	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000012618	SRBD1-201	3723	XM_013517546	ENSCLAP00000012473	987 (aa)	XP_013373000	UPI00038E960D
ENSCLAT00000012619	SRBD1-202	2928	-	ENSCLAP00000012474	975 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000008623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000008623's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000008623	SRBD1	100	88.377	ENSG00000068784	SRBD1	100	88.377	Homo_sapiens
ENSCLAG00000008623	SRBD1	100	51.906	ENSAPOG00000005103	si:ch211-117n7.8	99	51.906	Acanthochromis_polyacanthus
ENSCLAG00000008623	SRBD1	100	90.754	ENSAMEG00000005993	SRBD1	100	90.754	Ailuropoda_melanoleuca
ENSCLAG00000008623	SRBD1	95	54.175	ENSACIG00000009875	si:ch211-117n7.8	96	54.175	Amphilophus_citrinellus
ENSCLAG00000008623	SRBD1	99	52.161	ENSAOCG00000024718	si:ch211-117n7.8	99	52.255	Amphiprion_ocellaris
ENSCLAG00000008623	SRBD1	85	58.274	ENSAPEG00000002645	si:ch211-117n7.8	88	58.274	Amphiprion_percula
ENSCLAG00000008623	SRBD1	88	56.705	ENSATEG00000010844	si:ch211-117n7.8	98	52.823	Anabas_testudineus
ENSCLAG00000008623	SRBD1	100	70.751	ENSAPLG00000006313	SRBD1	100	70.936	Anas_platyrhynchos
ENSCLAG00000008623	SRBD1	100	88.377	ENSANAG00000025573	SRBD1	100	88.377	Aotus_nancymaae
ENSCLAG00000008623	SRBD1	95	52.588	ENSACLG00000024219	si:ch211-117n7.8	94	53.222	Astatotilapia_calliptera
ENSCLAG00000008623	SRBD1	85	62.143	ENSAMXG00000004294	SRBD1	93	58.316	Astyanax_mexicanus
ENSCLAG00000008623	SRBD1	94	94.304	ENSBTAG00000007508	SRBD1	99	94.304	Bos_taurus
ENSCLAG00000008623	SRBD1	73	30.108	WBGene00022830	ZK973.1	91	30.376	Caenorhabditis_elegans
ENSCLAG00000008623	SRBD1	100	87.575	ENSCJAG00000000727	SRBD1	100	87.575	Callithrix_jacchus
ENSCLAG00000008623	SRBD1	100	90.271	ENSCAFG00000002554	SRBD1	100	90.271	Canis_familiaris
ENSCLAG00000008623	SRBD1	100	87.349	ENSCAFG00020026284	SRBD1	99	92.553	Canis_lupus_dingo
ENSCLAG00000008623	SRBD1	100	88.164	ENSCHIG00000016535	SRBD1	98	88.465	Capra_hircus
ENSCLAG00000008623	SRBD1	100	90.600	ENSTSYG00000012797	SRBD1	100	90.600	Carlito_syrichta
ENSCLAG00000008623	SRBD1	100	94.467	ENSCPOG00000004773	SRBD1	100	94.467	Cavia_porcellus
ENSCLAG00000008623	SRBD1	100	88.778	ENSCCAG00000025589	SRBD1	100	88.778	Cebus_capucinus
ENSCLAG00000008623	SRBD1	100	88.878	ENSCATG00000039530	SRBD1	100	88.878	Cercocebus_atys
ENSCLAG00000008623	SRBD1	100	89.078	ENSCSAG00000013350	SRBD1	100	89.078	Chlorocebus_sabaeus
ENSCLAG00000008623	SRBD1	88	94.118	ENSCHOG00000003805	SRBD1	87	94.118	Choloepus_hoffmanni
ENSCLAG00000008623	SRBD1	100	73.917	ENSCPBG00000005677	SRBD1	100	74.421	Chrysemys_picta_bellii
ENSCLAG00000008623	SRBD1	79	43.022	ENSCING00000005950	-	99	43.022	Ciona_intestinalis
ENSCLAG00000008623	SRBD1	80	43.990	ENSCSAVG00000000861	-	99	43.990	Ciona_savignyi
ENSCLAG00000008623	SRBD1	99	88.554	ENSCANG00000016307	SRBD1	99	88.554	Colobus_angolensis_palliatus
ENSCLAG00000008623	SRBD1	100	85.729	ENSCGRG00001000513	Srbd1	100	85.729	Cricetulus_griseus_chok1gshd
ENSCLAG00000008623	SRBD1	100	85.729	ENSCGRG00000002283	Srbd1	100	85.729	Cricetulus_griseus_crigri
ENSCLAG00000008623	SRBD1	85	57.479	ENSCSEG00000000856	si:ch211-117n7.8	85	57.597	Cynoglossus_semilaevis
ENSCLAG00000008623	SRBD1	86	58.207	ENSCVAG00000020212	si:ch211-117n7.8	91	58.207	Cyprinodon_variegatus
ENSCLAG00000008623	SRBD1	100	89.421	ENSDNOG00000018686	SRBD1	100	89.421	Dasypus_novemcinctus
ENSCLAG00000008623	SRBD1	100	87.919	ENSDORG00000010468	Srbd1	100	87.919	Dipodomys_ordii
ENSCLAG00000008623	SRBD1	79	37.358	FBgn0051156	CG31156	79	37.610	Drosophila_melanogaster
ENSCLAG00000008623	SRBD1	89	83.789	ENSETEG00000000739	SRBD1	92	83.789	Echinops_telfairi
ENSCLAG00000008623	SRBD1	73	48.690	ENSEBUG00000008902	si:ch211-117n7.8	96	48.690	Eptatretus_burgeri
ENSCLAG00000008623	SRBD1	100	87.888	ENSEASG00005003132	SRBD1	97	94.268	Equus_asinus_asinus
ENSCLAG00000008623	SRBD1	100	91.191	ENSECAG00000013865	SRBD1	98	91.191	Equus_caballus
ENSCLAG00000008623	SRBD1	96	56.017	ENSELUG00000012592	si:ch211-117n7.8	91	56.153	Esox_lucius
ENSCLAG00000008623	SRBD1	100	90.791	ENSFCAG00000005101	SRBD1	100	90.791	Felis_catus
ENSCLAG00000008623	SRBD1	100	69.654	ENSFALG00000012966	SRBD1	100	69.694	Ficedula_albicollis
ENSCLAG00000008623	SRBD1	97	93.592	ENSFDAG00000016670	SRBD1	98	93.592	Fukomys_damarensis
ENSCLAG00000008623	SRBD1	95	54.498	ENSFHEG00000019480	si:ch211-117n7.8	93	54.498	Fundulus_heteroclitus
ENSCLAG00000008623	SRBD1	50	53.935	ENSGMOG00000018010	-	100	53.935	Gadus_morhua
ENSCLAG00000008623	SRBD1	100	71.069	ENSGALG00000009990	SRBD1	100	71.371	Gallus_gallus
ENSCLAG00000008623	SRBD1	90	55.617	ENSGAFG00000019664	si:ch211-117n7.8	99	52.079	Gambusia_affinis
ENSCLAG00000008623	SRBD1	63	60.800	ENSGACG00000010794	si:ch211-117n7.8	100	61.440	Gasterosteus_aculeatus
ENSCLAG00000008623	SRBD1	84	81.535	ENSGAGG00000006166	SRBD1	99	81.535	Gopherus_agassizii
ENSCLAG00000008623	SRBD1	97	89.083	ENSGGOG00000005910	SRBD1	100	89.083	Gorilla_gorilla
ENSCLAG00000008623	SRBD1	84	51.090	ENSHBUG00000013207	si:ch211-117n7.8	99	46.177	Haplochromis_burtoni
ENSCLAG00000008623	SRBD1	99	94.190	ENSHGLG00000018153	-	99	94.190	Heterocephalus_glaber_female
ENSCLAG00000008623	SRBD1	99	93.986	ENSHGLG00100015183	-	99	93.986	Heterocephalus_glaber_male
ENSCLAG00000008623	SRBD1	87	61.556	ENSIPUG00000009661	srbd1	95	57.884	Ictalurus_punctatus
ENSCLAG00000008623	SRBD1	100	92.246	ENSSTOG00000005898	SRBD1	100	92.246	Ictidomys_tridecemlineatus
ENSCLAG00000008623	SRBD1	100	81.864	ENSJJAG00000022244	Srbd1	100	81.864	Jaculus_jaculus
ENSCLAG00000008623	SRBD1	99	52.477	ENSKMAG00000003473	si:ch211-117n7.8	97	52.477	Kryptolebias_marmoratus
ENSCLAG00000008623	SRBD1	97	53.560	ENSLBEG00000027518	si:ch211-117n7.8	95	53.560	Labrus_bergylta
ENSCLAG00000008623	SRBD1	85	70.888	ENSLACG00000009790	SRBD1	99	70.888	Latimeria_chalumnae
ENSCLAG00000008623	SRBD1	95	60.870	ENSLOCG00000016360	si:ch211-117n7.8	99	58.665	Lepisosteus_oculatus
ENSCLAG00000008623	SRBD1	100	89.178	ENSMFAG00000042026	SRBD1	100	89.178	Macaca_fascicularis
ENSCLAG00000008623	SRBD1	100	88.978	ENSMMUG00000003490	SRBD1	100	88.978	Macaca_mulatta
ENSCLAG00000008623	SRBD1	100	86.573	ENSMNEG00000034701	SRBD1	100	86.573	Macaca_nemestrina
ENSCLAG00000008623	SRBD1	100	88.778	ENSMLEG00000000745	SRBD1	100	88.778	Mandrillus_leucophaeus
ENSCLAG00000008623	SRBD1	82	57.056	ENSMAMG00000021921	si:ch211-117n7.8	99	50.904	Mastacembelus_armatus
ENSCLAG00000008623	SRBD1	100	50.481	ENSMZEG00005027369	si:ch211-117n7.8	99	51.074	Maylandia_zebra
ENSCLAG00000008623	SRBD1	80	76.065	ENSMGAG00000010273	SRBD1	100	76.065	Meleagris_gallopavo
ENSCLAG00000008623	SRBD1	79	87.469	ENSMAUG00000013916	Srbd1	95	87.469	Mesocricetus_auratus
ENSCLAG00000008623	SRBD1	100	91.100	ENSMICG00000007835	SRBD1	100	91.100	Microcebus_murinus
ENSCLAG00000008623	SRBD1	100	85.020	ENSMOCG00000018716	Srbd1	100	85.020	Microtus_ochrogaster
ENSCLAG00000008623	SRBD1	84	57.416	ENSMMOG00000007507	si:ch211-117n7.8	87	57.416	Mola_mola
ENSCLAG00000008623	SRBD1	99	51.429	ENSMALG00000001562	si:ch211-117n7.8	99	51.721	Monopterus_albus
ENSCLAG00000008623	SRBD1	100	83.283	MGP_CAROLIEiJ_G0021934	Srbd1	99	85.294	Mus_caroli
ENSCLAG00000008623	SRBD1	100	83.789	ENSMUSG00000024135	Srbd1	100	83.789	Mus_musculus
ENSCLAG00000008623	SRBD1	100	82.472	MGP_PahariEiJ_G0020924	Srbd1	100	82.472	Mus_pahari
ENSCLAG00000008623	SRBD1	100	83.688	MGP_SPRETEiJ_G0022850	Srbd1	100	83.688	Mus_spretus
ENSCLAG00000008623	SRBD1	100	86.787	ENSMLUG00000007039	SRBD1	100	86.787	Myotis_lucifugus
ENSCLAG00000008623	SRBD1	100	84.149	ENSNGAG00000011893	Srbd1	100	84.149	Nannospalax_galili
ENSCLAG00000008623	SRBD1	85	56.818	ENSNBRG00000012873	si:ch211-117n7.8	99	51.742	Neolamprologus_brichardi
ENSCLAG00000008623	SRBD1	100	88.477	ENSNLEG00000016877	SRBD1	100	88.477	Nomascus_leucogenys
ENSCLAG00000008623	SRBD1	100	92.718	ENSODEG00000012095	SRBD1	100	92.718	Octodon_degus
ENSCLAG00000008623	SRBD1	100	51.415	ENSONIG00000000945	si:ch211-117n7.8	99	58.413	Oreochromis_niloticus
ENSCLAG00000008623	SRBD1	100	91.851	ENSOCUG00000015385	SRBD1	100	91.851	Oryctolagus_cuniculus
ENSCLAG00000008623	SRBD1	85	54.598	ENSORLG00000004427	si:ch211-117n7.8	84	54.598	Oryzias_latipes
ENSCLAG00000008623	SRBD1	85	57.159	ENSORLG00020012792	si:ch211-117n7.8	84	57.326	Oryzias_latipes_hni
ENSCLAG00000008623	SRBD1	85	57.276	ENSORLG00015018598	si:ch211-117n7.8	84	57.276	Oryzias_latipes_hsok
ENSCLAG00000008623	SRBD1	96	52.953	ENSOMEG00000012229	si:ch211-117n7.8	93	53.416	Oryzias_melastigma
ENSCLAG00000008623	SRBD1	100	84.068	ENSOGAG00000001076	SRBD1	100	84.669	Otolemur_garnettii
ENSCLAG00000008623	SRBD1	100	83.818	ENSOARG00000005958	SRBD1	100	84.109	Ovis_aries
ENSCLAG00000008623	SRBD1	100	88.377	ENSPPAG00000038442	SRBD1	100	88.878	Pan_paniscus
ENSCLAG00000008623	SRBD1	100	90.882	ENSPPRG00000003449	SRBD1	100	90.882	Panthera_pardus
ENSCLAG00000008623	SRBD1	100	90.982	ENSPTIG00000012495	SRBD1	100	90.982	Panthera_tigris_altaica
ENSCLAG00000008623	SRBD1	100	88.277	ENSPTRG00000011889	SRBD1	100	88.778	Pan_troglodytes
ENSCLAG00000008623	SRBD1	100	88.978	ENSPANG00000008063	SRBD1	100	88.978	Papio_anubis
ENSCLAG00000008623	SRBD1	99	54.759	ENSPKIG00000021973	si:ch211-117n7.8	97	54.759	Paramormyrops_kingsleyae
ENSCLAG00000008623	SRBD1	100	73.414	ENSPSIG00000008992	SRBD1	100	74.018	Pelodiscus_sinensis
ENSCLAG00000008623	SRBD1	84	56.220	ENSPMGG00000013348	si:ch211-117n7.8	99	51.457	Periophthalmus_magnuspinnatus
ENSCLAG00000008623	SRBD1	100	83.976	ENSPEMG00000020684	Srbd1	100	83.976	Peromyscus_maniculatus_bairdii
ENSCLAG00000008623	SRBD1	99	53.043	ENSPFOG00000010650	si:ch211-117n7.8	97	53.043	Poecilia_formosa
ENSCLAG00000008623	SRBD1	99	53.144	ENSPLAG00000002141	si:ch211-117n7.8	97	53.144	Poecilia_latipinna
ENSCLAG00000008623	SRBD1	99	53.043	ENSPMEG00000018537	si:ch211-117n7.8	97	53.043	Poecilia_mexicana
ENSCLAG00000008623	SRBD1	98	52.419	ENSPREG00000003258	si:ch211-117n7.8	98	52.419	Poecilia_reticulata
ENSCLAG00000008623	SRBD1	100	81.474	ENSPPYG00000012444	SRBD1	99	81.474	Pongo_abelii
ENSCLAG00000008623	SRBD1	83	83.445	ENSPCAG00000005629	SRBD1	86	83.445	Procavia_capensis
ENSCLAG00000008623	SRBD1	100	78.144	ENSPCOG00000017669	SRBD1	100	78.144	Propithecus_coquereli
ENSCLAG00000008623	SRBD1	100	79.960	ENSPVAG00000001782	SRBD1	100	79.960	Pteropus_vampyrus
ENSCLAG00000008623	SRBD1	84	54.940	ENSPNYG00000000508	si:ch211-117n7.8	99	49.492	Pundamilia_nyererei
ENSCLAG00000008623	SRBD1	96	58.088	ENSPNAG00000013492	SRBD1	95	58.403	Pygocentrus_nattereri
ENSCLAG00000008623	SRBD1	100	82.573	ENSRNOG00000014720	Srbd1	99	82.573	Rattus_norvegicus
ENSCLAG00000008623	SRBD1	99	88.755	ENSRBIG00000033486	SRBD1	99	88.755	Rhinopithecus_bieti
ENSCLAG00000008623	SRBD1	99	88.755	ENSRROG00000041599	SRBD1	99	88.755	Rhinopithecus_roxellana
ENSCLAG00000008623	SRBD1	100	88.176	ENSSBOG00000024982	SRBD1	100	88.176	Saimiri_boliviensis_boliviensis
ENSCLAG00000008623	SRBD1	84	60.650	ENSSFOG00015001128	si:ch211-117n7.8	90	60.650	Scleropages_formosus
ENSCLAG00000008623	SRBD1	84	58.760	ENSSMAG00000018256	si:ch211-117n7.8	82	58.880	Scophthalmus_maximus
ENSCLAG00000008623	SRBD1	84	58.284	ENSSLDG00000023189	si:ch211-117n7.8	98	52.658	Seriola_lalandi_dorsalis
ENSCLAG00000008623	SRBD1	100	79.213	ENSSARG00000009740	SRBD1	100	79.213	Sorex_araneus
ENSCLAG00000008623	SRBD1	88	78.671	ENSSPUG00000010475	SRBD1	100	73.825	Sphenodon_punctatus
ENSCLAG00000008623	SRBD1	85	55.976	ENSSPAG00000008092	-	95	52.096	Stegastes_partitus
ENSCLAG00000008623	SRBD1	100	89.289	ENSSSCG00000008445	SRBD1	98	89.590	Sus_scrofa
ENSCLAG00000008623	SRBD1	84	78.046	ENSTGUG00000003878	SRBD1	100	78.046	Taeniopygia_guttata
ENSCLAG00000008623	SRBD1	99	51.165	ENSTRUG00000007080	si:ch211-117n7.8	96	57.094	Takifugu_rubripes
ENSCLAG00000008623	SRBD1	99	50.387	ENSTNIG00000007464	si:ch211-117n7.8	99	50.387	Tetraodon_nigroviridis
ENSCLAG00000008623	SRBD1	82	98.936	ENSTBEG00000004556	SRBD1	76	98.936	Tupaia_belangeri
ENSCLAG00000008623	SRBD1	94	92.627	ENSTTRG00000011871	SRBD1	94	92.627	Tursiops_truncatus
ENSCLAG00000008623	SRBD1	100	90.863	ENSUAMG00000008126	SRBD1	97	93.478	Ursus_americanus
ENSCLAG00000008623	SRBD1	100	90.863	ENSUMAG00000012902	SRBD1	98	90.863	Ursus_maritimus
ENSCLAG00000008623	SRBD1	90	91.796	ENSVPAG00000006825	SRBD1	99	91.796	Vicugna_pacos
ENSCLAG00000008623	SRBD1	100	90.060	ENSVVUG00000005389	SRBD1	99	92.405	Vulpes_vulpes
ENSCLAG00000008623	SRBD1	100	52.748	ENSXETG00000002760	srbd1	100	52.845	Xenopus_tropicalis
ENSCLAG00000008623	SRBD1	96	54.119	ENSXMAG00000016861	si:ch211-117n7.8	93	54.119	Xiphophorus_maculatus