EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000008943 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 19 kDa protein
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 435 bases
Position: chrJH721909.1:1421149-1421583
Accession: 102009235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000012958	SRP19	PF01922.17	8.7e-15	1	2
ENSCLAP00000012958	SRP19	PF01922.17	8.7e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000013108	-	363	XM_005393194	ENSCLAP00000012958	120 (aa)	XP_005393251	UPI00038EB344

Gene Model

Click here to download ENSCLAG00000008943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000008943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000008943	-	100	100.000	ENSCLAG00000004791	-	100	100.000
ENSCLAG00000008943	-	93	79.845	ENSCLAG00000016055	-	93	79.845

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000008943	-	67	88.750	ENSCAFG00020008822	-	62	93.151	Canis_lupus_dingo
ENSCLAG00000008943	-	93	94.595	ENSCATG00000030502	-	93	94.595	Cercocebus_atys
ENSCLAG00000008943	-	93	94.595	ENSCANG00000041172	-	93	94.595	Colobus_angolensis_palliatus
ENSCLAG00000008943	-	61	89.041	ENSCGRG00001012009	-	66	89.041	Cricetulus_griseus_chok1gshd
ENSCLAG00000008943	-	60	93.056	ENSEEUG00000009240	-	89	93.056	Erinaceus_europaeus
ENSCLAG00000008943	-	93	94.595	ENSGGOG00000027482	SRP19	93	94.595	Gorilla_gorilla
ENSCLAG00000008943	-	93	70.690	ENSGGOG00000038737	-	93	70.690	Gorilla_gorilla
ENSCLAG00000008943	-	89	76.800	ENSHGLG00000006069	-	82	77.519	Heterocephalus_glaber_female
ENSCLAG00000008943	-	89	76.800	ENSHGLG00100006563	-	82	77.519	Heterocephalus_glaber_male
ENSCLAG00000008943	-	93	94.595	ENSMFAG00000040995	-	93	94.595	Macaca_fascicularis
ENSCLAG00000008943	-	93	94.595	ENSMMUG00000000331	-	93	94.595	Macaca_mulatta
ENSCLAG00000008943	-	93	94.595	ENSMLEG00000030461	-	93	94.595	Mandrillus_leucophaeus
ENSCLAG00000008943	-	93	64.567	ENSMOCG00000010964	-	94	64.567	Microtus_ochrogaster
ENSCLAG00000008943	-	93	95.495	ENSNLEG00000030884	-	93	95.495	Nomascus_leucogenys
ENSCLAG00000008943	-	82	92.857	ENSODEG00000000221	-	89	92.857	Octodon_degus
ENSCLAG00000008943	-	100	97.500	ENSODEG00000016828	-	100	97.500	Octodon_degus
ENSCLAG00000008943	-	100	99.167	ENSODEG00000003165	-	100	99.167	Octodon_degus
ENSCLAG00000008943	-	100	99.167	ENSODEG00000005033	-	100	99.167	Octodon_degus
ENSCLAG00000008943	-	93	68.103	ENSPPAG00000040638	-	93	68.103	Pan_paniscus
ENSCLAG00000008943	-	95	69.231	ENSPTRG00000045571	-	95	69.231	Pan_troglodytes
ENSCLAG00000008943	-	93	63.964	ENSPCOG00000019414	-	91	63.964	Propithecus_coquereli
ENSCLAG00000008943	-	93	94.595	ENSRROG00000033974	-	93	94.595	Rhinopithecus_roxellana
ENSCLAG00000008943	-	56	94.030	ENSSHAG00000009452	-	87	94.118	Sarcophilus_harrisii
ENSCLAG00000008943	-	59	74.648	ENSSPAG00000005240	-	57	74.648	Stegastes_partitus