EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000008974 (Gene tree)
Gene ID: 102012986
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 10326 bases
Position: chrJH721889.1:17858937-17869262
Accession: 102012986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000013004	MBD	PF01429.19	2.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000013154	MBD4-201	3187	XM_005387086	ENSCLAP00000013004	565 (aa)	XP_005387143	UPI00038F011E
ENSCLAT00000013155	MBD4-202	534	-	ENSCLAP00000013005	177 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000008974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000008974's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000008974	MBD4	99	70.578	ENSG00000129071	MBD4	97	90.556	Homo_sapiens
ENSCLAG00000008974	MBD4	62	52.795	ENSAPOG00000021668	mbd4	77	52.795	Acanthochromis_polyacanthus
ENSCLAG00000008974	MBD4	100	68.761	ENSAMEG00000004562	MBD4	99	68.761	Ailuropoda_melanoleuca
ENSCLAG00000008974	MBD4	86	42.200	ENSAOCG00000001157	mbd4	94	42.200	Amphiprion_ocellaris
ENSCLAG00000008974	MBD4	86	41.800	ENSAPEG00000016131	mbd4	94	41.800	Amphiprion_percula
ENSCLAG00000008974	MBD4	88	41.732	ENSATEG00000014594	MBD4	87	41.732	Anabas_testudineus
ENSCLAG00000008974	MBD4	70	78.857	ENSACAG00000014733	MBD4	70	78.857	Anolis_carolinensis
ENSCLAG00000008974	MBD4	100	64.223	ENSBTAG00000021645	MBD4	100	64.223	Bos_taurus
ENSCLAG00000008974	MBD4	98	69.245	ENSCJAG00000017293	MBD4	96	69.245	Callithrix_jacchus
ENSCLAG00000008974	MBD4	100	67.304	ENSCAFG00000004867	MBD4	99	67.304	Canis_familiaris
ENSCLAG00000008974	MBD4	100	67.304	ENSCAFG00020007082	MBD4	99	67.304	Canis_lupus_dingo
ENSCLAG00000008974	MBD4	100	63.351	ENSCHIG00000009760	MBD4	100	63.351	Capra_hircus
ENSCLAG00000008974	MBD4	98	69.479	ENSCCAG00000029796	MBD4	96	69.479	Cebus_capucinus
ENSCLAG00000008974	MBD4	99	69.190	ENSCATG00000035211	MBD4	98	69.542	Cercocebus_atys
ENSCLAG00000008974	MBD4	98	69.838	ENSCSAG00000009037	MBD4	96	70.197	Chlorocebus_sabaeus
ENSCLAG00000008974	MBD4	96	47.038	ENSCPBG00000014704	MBD4	99	47.038	Chrysemys_picta_bellii
ENSCLAG00000008974	MBD4	99	69.190	ENSCANG00000007120	MBD4	98	69.542	Colobus_angolensis_palliatus
ENSCLAG00000008974	MBD4	100	63.860	ENSCGRG00001003507	Mbd4	100	64.035	Cricetulus_griseus_chok1gshd
ENSCLAG00000008974	MBD4	100	63.860	ENSCGRG00000010974	Mbd4	100	64.035	Cricetulus_griseus_crigri
ENSCLAG00000008974	MBD4	100	67.133	ENSDNOG00000049619	MBD4	100	67.133	Dasypus_novemcinctus
ENSCLAG00000008974	MBD4	80	61.062	ENSDORG00000000902	-	93	61.062	Dipodomys_ordii
ENSCLAG00000008974	MBD4	87	37.822	ENSEBUG00000010816	mbd4	99	37.822	Eptatretus_burgeri
ENSCLAG00000008974	MBD4	100	71.204	ENSEASG00005014800	MBD4	100	71.204	Equus_asinus_asinus
ENSCLAG00000008974	MBD4	100	70.681	ENSECAG00000022106	MBD4	100	70.681	Equus_caballus
ENSCLAG00000008974	MBD4	90	62.205	ENSEEUG00000011459	MBD4	94	62.205	Erinaceus_europaeus
ENSCLAG00000008974	MBD4	96	71.795	ENSFCAG00000000083	MBD4	94	71.795	Felis_catus
ENSCLAG00000008974	MBD4	83	42.480	ENSFALG00000013663	MBD4	99	42.218	Ficedula_albicollis
ENSCLAG00000008974	MBD4	86	40.162	ENSGMOG00000013830	mbd4	99	40.162	Gadus_morhua
ENSCLAG00000008974	MBD4	95	47.880	ENSGAGG00000018644	MBD4	98	47.880	Gopherus_agassizii
ENSCLAG00000008974	MBD4	99	69.947	ENSGGOG00000010698	MBD4	98	69.947	Gorilla_gorilla
ENSCLAG00000008974	MBD4	100	82.570	ENSHGLG00000009034	MBD4	100	82.570	Heterocephalus_glaber_female
ENSCLAG00000008974	MBD4	100	82.746	ENSHGLG00100000135	MBD4	100	82.746	Heterocephalus_glaber_male
ENSCLAG00000008974	MBD4	100	67.247	ENSSTOG00000020663	MBD4	100	67.247	Ictidomys_tridecemlineatus
ENSCLAG00000008974	MBD4	88	42.802	ENSLOCG00000013054	MBD4	99	42.802	Lepisosteus_oculatus
ENSCLAG00000008974	MBD4	95	70.350	ENSLAFG00000010609	MBD4	94	70.350	Loxodonta_africana
ENSCLAG00000008974	MBD4	99	68.486	ENSMFAG00000002266	MBD4	98	68.838	Macaca_fascicularis
ENSCLAG00000008974	MBD4	99	68.070	ENSMMUG00000012723	MBD4	98	68.421	Macaca_mulatta
ENSCLAG00000008974	MBD4	95	66.912	ENSMNEG00000029752	MBD4	98	67.279	Macaca_nemestrina
ENSCLAG00000008974	MBD4	99	68.838	ENSMLEG00000024859	MBD4	98	69.190	Mandrillus_leucophaeus
ENSCLAG00000008974	MBD4	100	70.157	ENSMICG00000008022	MBD4	99	70.157	Microcebus_murinus
ENSCLAG00000008974	MBD4	66	46.933	ENSMOCG00000002466	-	93	46.933	Microtus_ochrogaster
ENSCLAG00000008974	MBD4	88	57.600	ENSMODG00000006399	-	99	57.600	Monodelphis_domestica
ENSCLAG00000008974	MBD4	88	42.200	ENSMALG00000021517	mbd4	87	42.200	Monopterus_albus
ENSCLAG00000008974	MBD4	99	64.956	MGP_CAROLIEiJ_G0028760	Mbd4	99	64.956	Mus_caroli
ENSCLAG00000008974	MBD4	99	65.062	ENSMUSG00000030322	Mbd4	99	65.062	Mus_musculus
ENSCLAG00000008974	MBD4	99	64.488	MGP_PahariEiJ_G0022511	-	99	64.488	Mus_pahari
ENSCLAG00000008974	MBD4	99	64.349	MGP_SPRETEiJ_G0029788	Mbd4	99	64.349	Mus_spretus
ENSCLAG00000008974	MBD4	100	67.714	ENSMPUG00000017195	MBD4	99	67.714	Mustela_putorius_furo
ENSCLAG00000008974	MBD4	96	73.346	ENSMLUG00000014766	MBD4	100	73.346	Myotis_lucifugus
ENSCLAG00000008974	MBD4	99	70.826	ENSNLEG00000005337	MBD4	98	70.826	Nomascus_leucogenys
ENSCLAG00000008974	MBD4	52	100.000	ENSMEUG00000015599	-	73	100.000	Notamacropus_eugenii
ENSCLAG00000008974	MBD4	100	59.266	ENSOPRG00000000473	MBD4	99	59.266	Ochotona_princeps
ENSCLAG00000008974	MBD4	86	43.434	ENSONIG00000017212	mbd4	99	43.434	Oreochromis_niloticus
ENSCLAG00000008974	MBD4	68	45.178	ENSOANG00000004589	-	97	42.890	Ornithorhynchus_anatinus
ENSCLAG00000008974	MBD4	100	61.872	ENSOCUG00000013006	MBD4	99	61.872	Oryctolagus_cuniculus
ENSCLAG00000008974	MBD4	100	66.434	ENSOGAG00000010236	MBD4	100	66.434	Otolemur_garnettii
ENSCLAG00000008974	MBD4	100	63.700	ENSOARG00000014699	MBD4	100	63.700	Ovis_aries
ENSCLAG00000008974	MBD4	99	69.877	ENSPPAG00000036528	MBD4	98	69.877	Pan_paniscus
ENSCLAG00000008974	MBD4	96	70.330	ENSPPRG00000016480	MBD4	94	70.330	Panthera_pardus
ENSCLAG00000008974	MBD4	99	70.053	ENSPTRG00000015377	MBD4	98	70.053	Pan_troglodytes
ENSCLAG00000008974	MBD4	99	69.366	ENSPANG00000015047	MBD4	98	69.366	Papio_anubis
ENSCLAG00000008974	MBD4	96	47.232	ENSPSIG00000007892	MBD4	97	47.232	Pelodiscus_sinensis
ENSCLAG00000008974	MBD4	94	56.530	ENSPEMG00000006226	Mbd4	99	56.425	Peromyscus_maniculatus_bairdii
ENSCLAG00000008974	MBD4	91	57.500	ENSPCIG00000002276	-	98	57.500	Phascolarctos_cinereus
ENSCLAG00000008974	MBD4	99	70.351	ENSPPYG00000013417	MBD4	98	70.351	Pongo_abelii
ENSCLAG00000008974	MBD4	96	63.620	ENSPCAG00000012915	MBD4	92	66.732	Procavia_capensis
ENSCLAG00000008974	MBD4	100	71.329	ENSPVAG00000005238	MBD4	99	71.329	Pteropus_vampyrus
ENSCLAG00000008974	MBD4	99	64.675	ENSRNOG00000010919	Mbd4	99	64.675	Rattus_norvegicus
ENSCLAG00000008974	MBD4	99	69.542	ENSRBIG00000027722	MBD4	98	69.894	Rhinopithecus_bieti
ENSCLAG00000008974	MBD4	99	69.366	ENSRROG00000029136	MBD4	98	69.718	Rhinopithecus_roxellana
ENSCLAG00000008974	MBD4	99	68.607	ENSSBOG00000016810	MBD4	98	68.607	Saimiri_boliviensis_boliviensis
ENSCLAG00000008974	MBD4	94	54.869	ENSSHAG00000012953	MBD4	93	54.869	Sarcophilus_harrisii
ENSCLAG00000008974	MBD4	88	44.311	ENSSDUG00000001365	mbd4	94	44.311	Seriola_dumerili
ENSCLAG00000008974	MBD4	78	39.198	ENSSLDG00000010295	MBD4	81	39.198	Seriola_lalandi_dorsalis
ENSCLAG00000008974	MBD4	82	56.077	ENSSARG00000004496	-	80	56.077	Sorex_araneus
ENSCLAG00000008974	MBD4	94	48.101	ENSSPUG00000017344	MBD4	99	48.101	Sphenodon_punctatus
ENSCLAG00000008974	MBD4	100	67.247	ENSSSCG00000033303	MBD4	100	67.247	Sus_scrofa
ENSCLAG00000008974	MBD4	87	61.468	ENSTBEG00000003041	-	86	61.468	Tupaia_belangeri
ENSCLAG00000008974	MBD4	94	71.536	ENSTTRG00000011265	MBD4	95	71.536	Tursiops_truncatus
ENSCLAG00000008974	MBD4	88	73.000	ENSUAMG00000000814	MBD4	100	73.000	Ursus_americanus
ENSCLAG00000008974	MBD4	100	69.634	ENSUMAG00000017542	MBD4	100	69.634	Ursus_maritimus
ENSCLAG00000008974	MBD4	60	62.567	ENSVPAG00000004040	-	62	62.567	Vicugna_pacos
ENSCLAG00000008974	MBD4	100	68.000	ENSVVUG00000014222	MBD4	99	68.000	Vulpes_vulpes
ENSCLAG00000008974	MBD4	50	62.917	ENSXMAG00000021129	mbd4	65	62.917	Xiphophorus_maculatus