EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000008995 (Gene tree)
Gene ID: 102018729
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 47583 bases
Position: chrJH721942.1:5528652-5576234
Accession: 102018729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000013036	ResIII	PF04851.15	9.1e-08	1	1
ENSCLAP00000013035	ResIII	PF04851.15	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000013187	SBNO1-202	3810	-	ENSCLAP00000013036	1269 (aa)	-	-
ENSCLAT00000013186	SBNO1-201	9116	XM_005403039	ENSCLAP00000013035	1392 (aa)	XP_005403096	UPI00038F0936

Gene Model

Click here to download ENSCLAG00000008995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000008995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000008995	SBNO1	83	57.994	ENSCLAG00000010178	SBNO2	82	68.027

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000008995	SBNO1	99	99.277	ENSG00000139697	SBNO1	100	97.057	Homo_sapiens
ENSCLAG00000008995	SBNO1	84	83.393	ENSAPOG00000003196	sbno1	98	81.834	Acanthochromis_polyacanthus
ENSCLAG00000008995	SBNO1	99	99.277	ENSAMEG00000015151	SBNO1	100	97.350	Ailuropoda_melanoleuca
ENSCLAG00000008995	SBNO1	99	82.105	ENSACIG00000008088	sbno1	95	82.105	Amphilophus_citrinellus
ENSCLAG00000008995	SBNO1	99	82.679	ENSAOCG00000014859	sbno1	94	82.679	Amphiprion_ocellaris
ENSCLAG00000008995	SBNO1	99	82.679	ENSAPEG00000006069	sbno1	94	82.679	Amphiprion_percula
ENSCLAG00000008995	SBNO1	99	84.991	ENSATEG00000006667	sbno1	95	84.991	Anabas_testudineus
ENSCLAG00000008995	SBNO1	99	95.118	ENSAPLG00000015674	SBNO1	100	91.966	Anas_platyrhynchos
ENSCLAG00000008995	SBNO1	100	93.728	ENSACAG00000015441	SBNO1	84	94.065	Anolis_carolinensis
ENSCLAG00000008995	SBNO1	100	97.865	ENSANAG00000029958	-	99	98.734	Aotus_nancymaae
ENSCLAG00000008995	SBNO1	99	73.960	ENSACLG00000024913	sbno1	99	74.570	Astatotilapia_calliptera
ENSCLAG00000008995	SBNO1	99	87.387	ENSAMXG00000019473	sbno1	95	87.387	Astyanax_mexicanus
ENSCLAG00000008995	SBNO1	99	98.732	ENSBTAG00000020505	SBNO1	99	97.486	Bos_taurus
ENSCLAG00000008995	SBNO1	99	99.096	ENSCJAG00000016599	SBNO1	100	97.128	Callithrix_jacchus
ENSCLAG00000008995	SBNO1	99	98.919	ENSCAFG00000007503	SBNO1	100	97.276	Canis_familiaris
ENSCLAG00000008995	SBNO1	100	97.402	ENSCAFG00020015363	SBNO1	100	97.402	Canis_lupus_dingo
ENSCLAG00000008995	SBNO1	99	98.732	ENSCHIG00000008382	SBNO1	99	98.732	Capra_hircus
ENSCLAG00000008995	SBNO1	99	99.458	ENSTSYG00000012749	SBNO1	100	97.416	Carlito_syrichta
ENSCLAG00000008995	SBNO1	97	99.640	ENSCAPG00000000384	SBNO1	99	99.640	Cavia_aperea
ENSCLAG00000008995	SBNO1	100	99.640	ENSCPOG00000008109	SBNO1	100	99.640	Cavia_porcellus
ENSCLAG00000008995	SBNO1	100	94.005	ENSCCAG00000035316	SBNO1	100	92.919	Cebus_capucinus
ENSCLAG00000008995	SBNO1	97	99.277	ENSCATG00000008239	SBNO1	98	99.277	Cercocebus_atys
ENSCLAG00000008995	SBNO1	84	98.043	ENSCSAG00000002064	SBNO1	100	98.359	Chlorocebus_sabaeus
ENSCLAG00000008995	SBNO1	95	98.537	ENSCHOG00000008814	SBNO1	91	98.537	Choloepus_hoffmanni
ENSCLAG00000008995	SBNO1	100	94.803	ENSCPBG00000025968	SBNO1	99	91.822	Chrysemys_picta_bellii
ENSCLAG00000008995	SBNO1	100	91.900	ENSCANG00000042688	-	100	91.828	Colobus_angolensis_palliatus
ENSCLAG00000008995	SBNO1	100	97.402	ENSCGRG00001017470	Sbno1	100	97.402	Cricetulus_griseus_chok1gshd
ENSCLAG00000008995	SBNO1	100	97.402	ENSCGRG00000004756	Sbno1	100	97.402	Cricetulus_griseus_crigri
ENSCLAG00000008995	SBNO1	99	83.363	ENSCSEG00000011919	sbno1	95	83.363	Cynoglossus_semilaevis
ENSCLAG00000008995	SBNO1	99	83.303	ENSCVAG00000007038	sbno1	95	83.303	Cyprinodon_variegatus
ENSCLAG00000008995	SBNO1	99	86.799	ENSDARG00000099080	sbno1	95	86.799	Danio_rerio
ENSCLAG00000008995	SBNO1	100	95.286	ENSDNOG00000017147	SBNO1	98	96.711	Dasypus_novemcinctus
ENSCLAG00000008995	SBNO1	100	97.865	ENSDORG00000015261	Sbno1	95	97.865	Dipodomys_ordii
ENSCLAG00000008995	SBNO1	92	98.551	ENSETEG00000005620	SBNO1	88	97.872	Echinops_telfairi
ENSCLAG00000008995	SBNO1	72	84.729	ENSEBUG00000013823	sbno1	85	84.729	Eptatretus_burgeri
ENSCLAG00000008995	SBNO1	54	95.760	ENSEASG00005012595	-	91	97.309	Equus_asinus_asinus
ENSCLAG00000008995	SBNO1	99	99.458	ENSECAG00000006127	SBNO1	100	97.846	Equus_caballus
ENSCLAG00000008995	SBNO1	83	99.451	ENSEEUG00000003793	SBNO1	83	99.451	Erinaceus_europaeus
ENSCLAG00000008995	SBNO1	99	86.667	ENSELUG00000002886	sbno1	95	86.667	Esox_lucius
ENSCLAG00000008995	SBNO1	99	98.396	ENSFCAG00000015331	SBNO1	99	97.773	Felis_catus
ENSCLAG00000008995	SBNO1	99	95.298	ENSFALG00000009273	SBNO1	100	92.037	Ficedula_albicollis
ENSCLAG00000008995	SBNO1	99	96.693	ENSFDAG00000014232	SBNO1	99	96.693	Fukomys_damarensis
ENSCLAG00000008995	SBNO1	99	83.483	ENSFHEG00000007360	sbno1	95	83.483	Fundulus_heteroclitus
ENSCLAG00000008995	SBNO1	96	84.404	ENSGMOG00000018229	sbno1	94	84.404	Gadus_morhua
ENSCLAG00000008995	SBNO1	87	96.954	ENSGALG00000003392	SBNO1	99	91.964	Gallus_gallus
ENSCLAG00000008995	SBNO1	99	83.662	ENSGAFG00000003960	sbno1	95	83.662	Gambusia_affinis
ENSCLAG00000008995	SBNO1	96	84.672	ENSGACG00000015633	sbno1	94	84.672	Gasterosteus_aculeatus
ENSCLAG00000008995	SBNO1	100	94.982	ENSGAGG00000001065	SBNO1	99	95.298	Gopherus_agassizii
ENSCLAG00000008995	SBNO1	100	98.399	ENSGGOG00000015000	SBNO1	99	99.277	Gorilla_gorilla
ENSCLAG00000008995	SBNO1	99	68.429	ENSHBUG00000011910	sbno1	99	68.902	Haplochromis_burtoni
ENSCLAG00000008995	SBNO1	100	98.420	ENSHGLG00000014165	-	99	99.638	Heterocephalus_glaber_female
ENSCLAG00000008995	SBNO1	91	85.178	ENSHCOG00000003246	sbno1	95	85.178	Hippocampus_comes
ENSCLAG00000008995	SBNO1	99	86.331	ENSIPUG00000015830	Sbno1	93	89.785	Ictalurus_punctatus
ENSCLAG00000008995	SBNO1	100	98.399	ENSSTOG00000023221	SBNO1	99	99.458	Ictidomys_tridecemlineatus
ENSCLAG00000008995	SBNO1	100	97.865	ENSJJAG00000001741	Sbno1	100	96.770	Jaculus_jaculus
ENSCLAG00000008995	SBNO1	99	84.545	ENSKMAG00000009696	sbno1	95	84.545	Kryptolebias_marmoratus
ENSCLAG00000008995	SBNO1	99	85.353	ENSLBEG00000007623	sbno1	95	85.353	Labrus_bergylta
ENSCLAG00000008995	SBNO1	99	81.857	ENSLACG00000017227	SBNO1	93	91.406	Latimeria_chalumnae
ENSCLAG00000008995	SBNO1	99	89.029	ENSLOCG00000005725	sbno1	95	89.029	Lepisosteus_oculatus
ENSCLAG00000008995	SBNO1	99	98.373	ENSLAFG00000002135	SBNO1	100	96.770	Loxodonta_africana
ENSCLAG00000008995	SBNO1	100	98.221	ENSMFAG00000031429	SBNO1	100	96.913	Macaca_fascicularis
ENSCLAG00000008995	SBNO1	100	98.221	ENSMMUG00000011496	SBNO1	100	96.913	Macaca_mulatta
ENSCLAG00000008995	SBNO1	99	99.277	ENSMLEG00000033260	SBNO1	99	99.277	Mandrillus_leucophaeus
ENSCLAG00000008995	SBNO1	99	85.172	ENSMAMG00000005473	sbno1	95	85.172	Mastacembelus_armatus
ENSCLAG00000008995	SBNO1	99	95.479	ENSMGAG00000003274	SBNO1	100	91.894	Meleagris_gallopavo
ENSCLAG00000008995	SBNO1	52	97.424	ENSMAUG00000004834	-	99	97.424	Mesocricetus_auratus
ENSCLAG00000008995	SBNO1	100	96.339	ENSMICG00000006573	-	100	96.339	Microcebus_murinus
ENSCLAG00000008995	SBNO1	100	97.480	ENSMOCG00000009390	Sbno1	100	97.480	Microtus_ochrogaster
ENSCLAG00000008995	SBNO1	99	83.929	ENSMMOG00000008691	sbno1	94	83.929	Mola_mola
ENSCLAG00000008995	SBNO1	99	97.283	ENSMODG00000012470	SBNO1	98	94.181	Monodelphis_domestica
ENSCLAG00000008995	SBNO1	99	83.485	ENSMALG00000001056	sbno1	95	83.485	Monopterus_albus
ENSCLAG00000008995	SBNO1	99	99.457	MGP_CAROLIEiJ_G0027749	Sbno1	99	97.126	Mus_caroli
ENSCLAG00000008995	SBNO1	99	99.457	ENSMUSG00000038095	Sbno1	99	97.428	Mus_musculus
ENSCLAG00000008995	SBNO1	99	98.564	MGP_PahariEiJ_G0024329	Sbno1	99	97.126	Mus_pahari
ENSCLAG00000008995	SBNO1	99	99.457	MGP_SPRETEiJ_G0028747	Sbno1	99	97.428	Mus_spretus
ENSCLAG00000008995	SBNO1	99	99.277	ENSMPUG00000001658	SBNO1	100	97.631	Mustela_putorius_furo
ENSCLAG00000008995	SBNO1	99	98.553	ENSMLUG00000017159	SBNO1	100	97.128	Myotis_lucifugus
ENSCLAG00000008995	SBNO1	99	99.096	ENSNGAG00000012620	Sbno1	100	97.272	Nannospalax_galili
ENSCLAG00000008995	SBNO1	99	74.050	ENSNBRG00000019189	sbno1	99	74.230	Neolamprologus_brichardi
ENSCLAG00000008995	SBNO1	100	93.733	ENSNLEG00000001502	SBNO1	100	93.307	Nomascus_leucogenys
ENSCLAG00000008995	SBNO1	60	96.774	ENSMEUG00000008768	-	86	94.845	Notamacropus_eugenii
ENSCLAG00000008995	SBNO1	99	97.473	ENSOPRG00000011054	SBNO1	100	93.763	Ochotona_princeps
ENSCLAG00000008995	SBNO1	100	99.054	ENSODEG00000009997	SBNO1	100	99.640	Octodon_degus
ENSCLAG00000008995	SBNO1	99	83.574	ENSONIG00000015348	sbno1	99	75.634	Oreochromis_niloticus
ENSCLAG00000008995	SBNO1	98	96.422	ENSOCUG00000002441	SBNO1	95	95.842	Oryctolagus_cuniculus
ENSCLAG00000008995	SBNO1	99	83.002	ENSORLG00000001593	sbno1	95	83.002	Oryzias_latipes
ENSCLAG00000008995	SBNO1	99	83.002	ENSORLG00020015216	sbno1	95	83.002	Oryzias_latipes_hni
ENSCLAG00000008995	SBNO1	99	83.183	ENSORLG00015002726	sbno1	95	83.183	Oryzias_latipes_hsok
ENSCLAG00000008995	SBNO1	99	83.303	ENSOMEG00000019313	sbno1	99	75.388	Oryzias_melastigma
ENSCLAG00000008995	SBNO1	52	94.100	ENSOGAG00000010781	-	99	94.100	Otolemur_garnettii
ENSCLAG00000008995	SBNO1	99	98.732	ENSOARG00000004404	SBNO1	99	97.059	Ovis_aries
ENSCLAG00000008995	SBNO1	100	98.221	ENSPPAG00000024635	SBNO1	99	99.096	Pan_paniscus
ENSCLAG00000008995	SBNO1	99	98.396	ENSPPRG00000022092	SBNO1	99	97.773	Panthera_pardus
ENSCLAG00000008995	SBNO1	100	98.399	ENSPTIG00000017803	SBNO1	100	97.487	Panthera_tigris_altaica
ENSCLAG00000008995	SBNO1	100	98.399	ENSPTRG00000005597	SBNO1	99	99.277	Pan_troglodytes
ENSCLAG00000008995	SBNO1	99	99.277	ENSPANG00000011640	SBNO1	99	99.277	Papio_anubis
ENSCLAG00000008995	SBNO1	99	86.667	ENSPKIG00000001441	sbno1	95	86.667	Paramormyrops_kingsleyae
ENSCLAG00000008995	SBNO1	91	91.441	ENSPSIG00000009256	-	100	87.646	Pelodiscus_sinensis
ENSCLAG00000008995	SBNO1	99	94.604	ENSPSIG00000009572	-	100	91.422	Pelodiscus_sinensis
ENSCLAG00000008995	SBNO1	100	97.244	ENSPEMG00000016087	Sbno1	100	97.244	Peromyscus_maniculatus_bairdii
ENSCLAG00000008995	SBNO1	99	96.920	ENSPCIG00000010985	SBNO1	99	93.898	Phascolarctos_cinereus
ENSCLAG00000008995	SBNO1	99	83.662	ENSPFOG00000005069	sbno1	95	83.662	Poecilia_formosa
ENSCLAG00000008995	SBNO1	99	83.662	ENSPLAG00000015015	sbno1	95	83.662	Poecilia_latipinna
ENSCLAG00000008995	SBNO1	99	83.662	ENSPMEG00000021212	sbno1	95	83.662	Poecilia_mexicana
ENSCLAG00000008995	SBNO1	99	83.303	ENSPREG00000017746	sbno1	95	83.303	Poecilia_reticulata
ENSCLAG00000008995	SBNO1	99	99.277	ENSPPYG00000005084	SBNO1	100	96.626	Pongo_abelii
ENSCLAG00000008995	SBNO1	89	91.370	ENSPCAG00000008634	SBNO1	88	91.334	Procavia_capensis
ENSCLAG00000008995	SBNO1	100	98.221	ENSPCOG00000024277	SBNO1	99	99.091	Propithecus_coquereli
ENSCLAG00000008995	SBNO1	92	99.405	ENSPVAG00000015304	SBNO1	87	99.405	Pteropus_vampyrus
ENSCLAG00000008995	SBNO1	99	83.574	ENSPNYG00000004291	sbno1	95	83.574	Pundamilia_nyererei
ENSCLAG00000008995	SBNO1	99	87.950	ENSPNAG00000015622	sbno1	95	87.950	Pygocentrus_nattereri
ENSCLAG00000008995	SBNO1	99	99.094	ENSRNOG00000001064	Sbno1	99	99.094	Rattus_norvegicus
ENSCLAG00000008995	SBNO1	99	99.277	ENSRROG00000034230	SBNO1	99	99.277	Rhinopithecus_roxellana
ENSCLAG00000008995	SBNO1	97	92.224	ENSSBOG00000015422	SBNO1	100	92.188	Saimiri_boliviensis_boliviensis
ENSCLAG00000008995	SBNO1	99	86.667	ENSSFOG00015019025	sbno1	95	86.667	Scleropages_formosus
ENSCLAG00000008995	SBNO1	99	83.725	ENSSMAG00000013640	sbno1	95	83.725	Scophthalmus_maximus
ENSCLAG00000008995	SBNO1	99	84.810	ENSSDUG00000023480	sbno1	95	84.810	Seriola_dumerili
ENSCLAG00000008995	SBNO1	99	84.810	ENSSLDG00000007928	sbno1	95	84.810	Seriola_lalandi_dorsalis
ENSCLAG00000008995	SBNO1	90	98.734	ENSSARG00000002594	SBNO1	89	97.896	Sorex_araneus
ENSCLAG00000008995	SBNO1	99	93.863	ENSSPUG00000012640	SBNO1	100	88.873	Sphenodon_punctatus
ENSCLAG00000008995	SBNO1	99	83.124	ENSSPAG00000016244	sbno1	95	83.124	Stegastes_partitus
ENSCLAG00000008995	SBNO1	100	99.104	ENSSSCG00000009776	SBNO1	100	97.559	Sus_scrofa
ENSCLAG00000008995	SBNO1	99	95.479	ENSTGUG00000005380	SBNO1	100	91.966	Taeniopygia_guttata
ENSCLAG00000008995	SBNO1	99	84.810	ENSTRUG00000018490	sbno1	95	84.810	Takifugu_rubripes
ENSCLAG00000008995	SBNO1	56	70.384	ENSTNIG00000013506	sbno1	99	70.393	Tetraodon_nigroviridis
ENSCLAG00000008995	SBNO1	99	99.277	ENSUAMG00000019671	SBNO1	100	97.631	Ursus_americanus
ENSCLAG00000008995	SBNO1	99	99.277	ENSUMAG00000004002	SBNO1	100	97.631	Ursus_maritimus
ENSCLAG00000008995	SBNO1	95	95.652	ENSVPAG00000007024	SBNO1	95	95.652	Vicugna_pacos
ENSCLAG00000008995	SBNO1	99	99.277	ENSVVUG00000027807	SBNO1	100	97.487	Vulpes_vulpes
ENSCLAG00000008995	SBNO1	99	91.800	ENSXETG00000031930	SBNO1	95	91.800	Xenopus_tropicalis
ENSCLAG00000008995	SBNO1	86	86.089	ENSXCOG00000011607	sbno1	90	85.864	Xiphophorus_couchianus
ENSCLAG00000008995	SBNO1	99	83.303	ENSXMAG00000002140	sbno1	95	83.303	Xiphophorus_maculatus