EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCLAG00000009154 (Gene tree)
Gene ID
102014866
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Chinchilla_lanigera
Status
putative
Strand
Minus strand
Length
14372 bases
Position
chrJH721914.1:2482968-2497339
Accession
102014866
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCLAP00000013257RRM_1PF00076.228.5e-4412
ENSCLAP00000013257RRM_1PF00076.228.5e-4422
ENSCLAP00000013256RRM_1PF00076.229.7e-4412
ENSCLAP00000013256RRM_1PF00076.229.7e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCLAT00000013408PUF60-2012357XM_005395816ENSCLAP00000013256564 (aa)XP_005395873UPI00038F1365
ENSCLAT00000013409PUF60-2022306XM_005395817ENSCLAP00000013257547 (aa)XP_005395874UPI000696602B
Gene Model
Click here to download ENSCLAG00000009154's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000009154's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCLAG00000009154PUF605935.294ENSCLAG00000000596U2AF26137.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCLAG00000009154PUF6010098.582ENSG00000179950PUF6010099.419Homo_sapiens
ENSCLAG00000009154PUF609385.795ENSAPOG00000001713puf60b9985.795Acanthochromis_polyacanthus
ENSCLAG00000009154PUF609996.270ENSAMEG00000006406PUF609996.270Ailuropoda_melanoleuca
ENSCLAG00000009154PUF609177.351ENSACIG00000003263-9977.778Amphilophus_citrinellus
ENSCLAG00000009154PUF609185.605ENSACIG00000021705puf60b10085.605Amphilophus_citrinellus
ENSCLAG00000009154PUF609381.369ENSAOCG00000015558-9981.939Amphiprion_ocellaris
ENSCLAG00000009154PUF609385.769ENSAOCG00000005395puf60b10086.564Amphiprion_ocellaris
ENSCLAG00000009154PUF609175.397ENSAPEG00000001836-9976.667Amphiprion_percula
ENSCLAG00000009154PUF609382.975ENSAPEG00000011923puf60b9982.975Amphiprion_percula
ENSCLAG00000009154PUF609385.606ENSATEG00000001730puf60b9985.606Anabas_testudineus
ENSCLAG00000009154PUF609381.143ENSATEG00000006303-9981.524Anabas_testudineus
ENSCLAG00000009154PUF609398.659ENSAPLG00000010150PUF6010098.659Anas_platyrhynchos
ENSCLAG00000009154PUF609296.756ENSACAG00000001645PUF609796.395Anolis_carolinensis
ENSCLAG00000009154PUF6010099.291ENSANAG00000018626PUF6010099.419Aotus_nancymaae
ENSCLAG00000009154PUF609185.605ENSACLG00000004462puf60b10085.605Astatotilapia_calliptera
ENSCLAG00000009154PUF609176.449ENSAMXG00000041030puf60b10074.719Astyanax_mexicanus
ENSCLAG00000009154PUF609285.127ENSAMXG00000036570puf60a9784.932Astyanax_mexicanus
ENSCLAG00000009154PUF6010099.291ENSBTAG00000037493PUF6010099.291Bos_taurus
ENSCLAG00000009154PUF607650.825WBGene00004389rnp-68353.497Caenorhabditis_elegans
ENSCLAG00000009154PUF6010099.645ENSCJAG00000021485PUF6010099.645Callithrix_jacchus
ENSCLAG00000009154PUF6010099.086ENSCAFG00000001400PUF6010099.086Canis_familiaris
ENSCLAG00000009154PUF6010099.113ENSCAFG00020018754PUF6010099.113Canis_lupus_dingo
ENSCLAG00000009154PUF609998.561ENSCHIG00000001618PUF609298.561Capra_hircus
ENSCLAG00000009154PUF6010099.468ENSTSYG00000011912PUF6010099.806Carlito_syrichta
ENSCLAG00000009154PUF609993.594ENSCPOG00000014613PUF609993.238Cavia_porcellus
ENSCLAG00000009154PUF6010099.291ENSCCAG00000007744PUF6010099.291Cebus_capucinus
ENSCLAG00000009154PUF6010098.582ENSCATG00000035405PUF6010098.582Cercocebus_atys
ENSCLAG00000009154PUF609199.419ENSCSAG00000008878PUF6010099.419Chlorocebus_sabaeus
ENSCLAG00000009154PUF609398.659ENSCPBG00000005595PUF609898.659Chrysemys_picta_bellii
ENSCLAG00000009154PUF605763.043ENSCING00000002156-8763.043Ciona_intestinalis
ENSCLAG00000009154PUF609248.876ENSCING00000008436-9848.956Ciona_intestinalis
ENSCLAG00000009154PUF608950.820ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSCLAG00000009154PUF608955.556ENSCSAVG00000001385-9955.192Ciona_savignyi
ENSCLAG00000009154PUF608098.409ENSCANG00000041843PUF6010099.520Colobus_angolensis_palliatus
ENSCLAG00000009154PUF6010099.291ENSCGRG00001017442Puf6010099.291Cricetulus_griseus_chok1gshd
ENSCLAG00000009154PUF609998.201ENSCGRG00000003717Puf609998.201Cricetulus_griseus_crigri
ENSCLAG00000009154PUF609881.622ENSCSEG00000019887puf60b9384.820Cynoglossus_semilaevis
ENSCLAG00000009154PUF609175.099ENSCSEG00000014845-8977.273Cynoglossus_semilaevis
ENSCLAG00000009154PUF609184.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSCLAG00000009154PUF608480.000ENSCVAG00000001560-9879.747Cyprinodon_variegatus
ENSCLAG00000009154PUF609178.947ENSDARG00000001241puf60b9996.032Danio_rerio
ENSCLAG00000009154PUF609186.932ENSDARG00000032175puf60a9994.043Danio_rerio
ENSCLAG00000009154PUF609981.429ENSDNOG00000043278PUF609881.429Dasypus_novemcinctus
ENSCLAG00000009154PUF609998.921ENSDORG00000004585Puf6010098.921Dipodomys_ordii
ENSCLAG00000009154PUF608950.973FBgn0028577hfp8658.580Drosophila_melanogaster
ENSCLAG00000009154PUF609362.651ENSEBUG00000014291puf60b8565.739Eptatretus_burgeri
ENSCLAG00000009154PUF608972.485ENSEBUG00000005470-8872.222Eptatretus_burgeri
ENSCLAG00000009154PUF6010099.113ENSEASG00005009695PUF6010099.113Equus_asinus_asinus
ENSCLAG00000009154PUF609999.281ENSECAG00000024681PUF609999.281Equus_caballus
ENSCLAG00000009154PUF609383.681ENSELUG00000006507puf60b9980.586Esox_lucius
ENSCLAG00000009154PUF609583.853ENSELUG00000018443-9985.996Esox_lucius
ENSCLAG00000009154PUF6010099.468ENSFCAG00000001045PUF6010099.468Felis_catus
ENSCLAG00000009154PUF609386.015ENSFALG00000001136PUF609887.165Ficedula_albicollis
ENSCLAG00000009154PUF6010099.645ENSFDAG00000017177PUF6010099.645Fukomys_damarensis
ENSCLAG00000009154PUF608879.317ENSFHEG00000021687PUF6010080.164Fundulus_heteroclitus
ENSCLAG00000009154PUF609384.250ENSFHEG00000020046puf60b10086.180Fundulus_heteroclitus
ENSCLAG00000009154PUF609371.992ENSGMOG00000006392puf60b10071.241Gadus_morhua
ENSCLAG00000009154PUF606198.547ENSGALG00000039901PUF609498.547Gallus_gallus
ENSCLAG00000009154PUF609179.641ENSGAFG00000004334-9979.042Gambusia_affinis
ENSCLAG00000009154PUF609383.491ENSGAFG00000021040puf60b10085.605Gambusia_affinis
ENSCLAG00000009154PUF609373.535ENSGACG00000004717puf60b9872.865Gasterosteus_aculeatus
ENSCLAG00000009154PUF609170.793ENSGACG00000001484-10069.423Gasterosteus_aculeatus
ENSCLAG00000009154PUF609398.659ENSGAGG00000013289PUF609298.659Gopherus_agassizii
ENSCLAG00000009154PUF6010098.582ENSGGOG00000004646PUF6010098.582Gorilla_gorilla
ENSCLAG00000009154PUF609384.820ENSHBUG00000015118puf60b10085.605Haplochromis_burtoni
ENSCLAG00000009154PUF609381.784ENSHBUG00000009634-10082.738Haplochromis_burtoni
ENSCLAG00000009154PUF6010099.645ENSHGLG00000006111PUF6010099.645Heterocephalus_glaber_female
ENSCLAG00000009154PUF6010099.645ENSHGLG00100012362PUF6010099.645Heterocephalus_glaber_male
ENSCLAG00000009154PUF609282.320ENSHCOG00000015541puf60b10081.919Hippocampus_comes
ENSCLAG00000009154PUF609066.798ENSHCOG00000000378-9965.038Hippocampus_comes
ENSCLAG00000009154PUF609178.759ENSIPUG00000004660puf60b9978.531Ictalurus_punctatus
ENSCLAG00000009154PUF609382.101ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSCLAG00000009154PUF6010098.936ENSSTOG00000025037PUF6010098.936Ictidomys_tridecemlineatus
ENSCLAG00000009154PUF6010099.113ENSJJAG00000001076Puf6010099.113Jaculus_jaculus
ENSCLAG00000009154PUF609178.450ENSKMAG00000010106-10075.933Kryptolebias_marmoratus
ENSCLAG00000009154PUF609185.029ENSKMAG00000016745puf60b10086.180Kryptolebias_marmoratus
ENSCLAG00000009154PUF609584.416ENSLBEG00000012505puf60b10084.416Labrus_bergylta
ENSCLAG00000009154PUF606790.710ENSLACG00000005456PUF6010090.437Latimeria_chalumnae
ENSCLAG00000009154PUF609489.831ENSLOCG00000010106puf60b9989.734Lepisosteus_oculatus
ENSCLAG00000009154PUF609995.737ENSLAFG00000022929PUF6010095.737Loxodonta_africana
ENSCLAG00000009154PUF6010098.582ENSMFAG00000043373PUF6010098.582Macaca_fascicularis
ENSCLAG00000009154PUF6010098.759ENSMMUG00000013558PUF6010098.759Macaca_mulatta
ENSCLAG00000009154PUF6010098.582ENSMNEG00000031099PUF6010098.582Macaca_nemestrina
ENSCLAG00000009154PUF609199.419ENSMLEG00000040009PUF6010099.419Mandrillus_leucophaeus
ENSCLAG00000009154PUF609385.150ENSMAMG00000010394puf60b10083.925Mastacembelus_armatus
ENSCLAG00000009154PUF609382.543ENSMAMG00000019476-9982.163Mastacembelus_armatus
ENSCLAG00000009154PUF609185.605ENSMZEG00005018515puf60b10085.605Maylandia_zebra
ENSCLAG00000009154PUF609381.973ENSMZEG00005019425-9981.973Maylandia_zebra
ENSCLAG00000009154PUF609398.659ENSMGAG00000013070PUF609898.659Meleagris_gallopavo
ENSCLAG00000009154PUF607299.265ENSMAUG00000014267-10099.265Mesocricetus_auratus
ENSCLAG00000009154PUF6010075.906ENSMAUG00000018549-10076.130Mesocricetus_auratus
ENSCLAG00000009154PUF6010098.582ENSMICG00000012226PUF609999.808Microcebus_murinus
ENSCLAG00000009154PUF6010099.468ENSMOCG00000018780Puf6010099.468Microtus_ochrogaster
ENSCLAG00000009154PUF609185.988ENSMMOG00000004217puf60b10085.988Mola_mola
ENSCLAG00000009154PUF609375.394ENSMMOG00000018059-9976.712Mola_mola
ENSCLAG00000009154PUF6010097.258ENSMODG00000009161PUF6010097.258Monodelphis_domestica
ENSCLAG00000009154PUF609378.030ENSMALG00000006797puf60b9978.030Monopterus_albus
ENSCLAG00000009154PUF609380.645ENSMALG00000000200-9979.245Monopterus_albus
ENSCLAG00000009154PUF6010099.291MGP_CAROLIEiJ_G0019910Puf6010099.291Mus_caroli
ENSCLAG00000009154PUF6010099.291ENSMUSG00000002524Puf6010099.291Mus_musculus
ENSCLAG00000009154PUF6010099.291MGP_PahariEiJ_G0019920Puf6010099.291Mus_pahari
ENSCLAG00000009154PUF6010099.291MGP_SPRETEiJ_G0020812Puf6010099.291Mus_spretus
ENSCLAG00000009154PUF609998.381ENSMPUG00000008137PUF609798.381Mustela_putorius_furo
ENSCLAG00000009154PUF609295.644ENSMLUG00000013032-9895.644Myotis_lucifugus
ENSCLAG00000009154PUF609998.022ENSMLUG00000000238-9898.022Myotis_lucifugus
ENSCLAG00000009154PUF6010099.645ENSNGAG00000000712Puf6010099.645Nannospalax_galili
ENSCLAG00000009154PUF609382.163ENSNBRG00000017223-9982.129Neolamprologus_brichardi
ENSCLAG00000009154PUF607781.920ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSCLAG00000009154PUF6010098.582ENSNLEG00000002156PUF6010098.582Nomascus_leucogenys
ENSCLAG00000009154PUF606899.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSCLAG00000009154PUF608974.359ENSODEG00000015513-9971.563Octodon_degus
ENSCLAG00000009154PUF6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSCLAG00000009154PUF609382.197ENSONIG00000014030-9982.197Oreochromis_niloticus
ENSCLAG00000009154PUF609384.848ENSONIG00000006247puf60b9984.848Oreochromis_niloticus
ENSCLAG00000009154PUF609078.711ENSOANG00000006962PUF609978.711Ornithorhynchus_anatinus
ENSCLAG00000009154PUF609384.820ENSORLG00000012279puf60b10085.029Oryzias_latipes
ENSCLAG00000009154PUF609178.788ENSORLG00000028655-9978.897Oryzias_latipes
ENSCLAG00000009154PUF609278.679ENSORLG00020018144-9878.788Oryzias_latipes_hni
ENSCLAG00000009154PUF609384.820ENSORLG00020007333puf6010085.029Oryzias_latipes_hni
ENSCLAG00000009154PUF609383.932ENSORLG00015007718puf60b10084.895Oryzias_latipes_hsok
ENSCLAG00000009154PUF609278.937ENSORLG00015016833-9879.048Oryzias_latipes_hsok
ENSCLAG00000009154PUF609382.342ENSOMEG00000001643puf60b9983.232Oryzias_melastigma
ENSCLAG00000009154PUF609379.735ENSOMEG00000022185-9879.696Oryzias_melastigma
ENSCLAG00000009154PUF609998.046ENSOGAG00000006259PUF609998.046Otolemur_garnettii
ENSCLAG00000009154PUF609397.132ENSOARG00000016235PUF609997.132Ovis_aries
ENSCLAG00000009154PUF6010098.582ENSPPAG00000029933PUF6010098.582Pan_paniscus
ENSCLAG00000009154PUF6010099.468ENSPPRG00000003257PUF6010099.468Panthera_pardus
ENSCLAG00000009154PUF609997.963ENSPTIG00000009795PUF609997.126Panthera_tigris_altaica
ENSCLAG00000009154PUF609998.381ENSPTRG00000043963-9998.381Pan_troglodytes
ENSCLAG00000009154PUF6010098.404ENSPTRG00000020670PUF6010098.404Pan_troglodytes
ENSCLAG00000009154PUF6010098.582ENSPANG00000021936PUF6010098.582Papio_anubis
ENSCLAG00000009154PUF609883.364ENSPKIG00000004295puf60a9992.647Paramormyrops_kingsleyae
ENSCLAG00000009154PUF609387.452ENSPKIG00000012204puf60b10088.269Paramormyrops_kingsleyae
ENSCLAG00000009154PUF609398.470ENSPSIG00000004679PUF609998.470Pelodiscus_sinensis
ENSCLAG00000009154PUF609184.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSCLAG00000009154PUF6010099.468ENSPEMG00000008820Puf6010099.468Peromyscus_maniculatus_bairdii
ENSCLAG00000009154PUF609895.676ENSPCIG00000020270PUF609999.808Phascolarctos_cinereus
ENSCLAG00000009154PUF609384.250ENSPFOG00000019217puf60b10084.825Poecilia_formosa
ENSCLAG00000009154PUF609180.925ENSPFOG00000011118-9781.274Poecilia_formosa
ENSCLAG00000009154PUF609185.029ENSPLAG00000010754puf60b10086.180Poecilia_latipinna
ENSCLAG00000009154PUF609876.937ENSPLAG00000017025-9080.888Poecilia_latipinna
ENSCLAG00000009154PUF609384.250ENSPMEG00000000838puf60b10086.180Poecilia_mexicana
ENSCLAG00000009154PUF609876.937ENSPMEG00000009767-9081.274Poecilia_mexicana
ENSCLAG00000009154PUF609381.516ENSPREG00000005440puf60b10083.929Poecilia_reticulata
ENSCLAG00000009154PUF607497.842ENSPPYG00000018951-9597.842Pongo_abelii
ENSCLAG00000009154PUF607499.760ENSPCAG00000014837PUF6010099.760Procavia_capensis
ENSCLAG00000009154PUF6010099.113ENSPCOG00000027981PUF6010099.113Propithecus_coquereli
ENSCLAG00000009154PUF6091100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSCLAG00000009154PUF609381.973ENSPNYG00000004273-9981.973Pundamilia_nyererei
ENSCLAG00000009154PUF609185.605ENSPNYG00000002556puf60b10085.605Pundamilia_nyererei
ENSCLAG00000009154PUF609285.156ENSPNAG00000019909puf60a9984.961Pygocentrus_nattereri
ENSCLAG00000009154PUF609976.277ENSPNAG00000019415puf60b9176.699Pygocentrus_nattereri
ENSCLAG00000009154PUF6010099.269ENSRNOG00000009960Puf6010099.269Rattus_norvegicus
ENSCLAG00000009154PUF6010098.582ENSRBIG00000035274PUF6010098.582Rhinopithecus_bieti
ENSCLAG00000009154PUF6010098.582ENSRROG00000029360PUF6010098.582Rhinopithecus_roxellana
ENSCLAG00000009154PUF609894.746ENSSBOG00000027089PUF609898.276Saimiri_boliviensis_boliviensis
ENSCLAG00000009154PUF609196.289ENSSHAG00000006668PUF609696.289Sarcophilus_harrisii
ENSCLAG00000009154PUF609381.703ENSSFOG00015019371puf60a9887.525Scleropages_formosus
ENSCLAG00000009154PUF608886.437ENSSFOG00015019619puf60b9986.437Scleropages_formosus
ENSCLAG00000009154PUF606892.580ENSSMAG00000016381puf60b7392.580Scophthalmus_maximus
ENSCLAG00000009154PUF609280.153ENSSDUG00000007048-9880.534Seriola_dumerili
ENSCLAG00000009154PUF609383.643ENSSDUG00000009935puf60b9984.646Seriola_dumerili
ENSCLAG00000009154PUF609180.455ENSSLDG00000007366-9980.835Seriola_lalandi_dorsalis
ENSCLAG00000009154PUF609285.741ENSSLDG00000024011puf60b10084.112Seriola_lalandi_dorsalis
ENSCLAG00000009154PUF606086.431ENSSPUG00000013518PUF609485.757Sphenodon_punctatus
ENSCLAG00000009154PUF609182.061ENSSPAG00000020285-10082.634Stegastes_partitus
ENSCLAG00000009154PUF609382.994ENSSPAG00000012144puf60b10084.299Stegastes_partitus
ENSCLAG00000009154PUF609997.687ENSSSCG00000038800PUF609899.208Sus_scrofa
ENSCLAG00000009154PUF609395.402ENSTGUG00000012797-10095.402Taeniopygia_guttata
ENSCLAG00000009154PUF609384.280ENSTRUG00000005420puf60b10082.804Takifugu_rubripes
ENSCLAG00000009154PUF609179.960ENSTRUG00000008843-10080.361Takifugu_rubripes
ENSCLAG00000009154PUF609384.280ENSTNIG00000013675puf60b10084.091Tetraodon_nigroviridis
ENSCLAG00000009154PUF609378.011ENSTNIG00000003069-10078.011Tetraodon_nigroviridis
ENSCLAG00000009154PUF607081.503ENSTBEG00000001899-10081.792Tupaia_belangeri
ENSCLAG00000009154PUF605796.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSCLAG00000009154PUF609199.031ENSTTRG00000017088PUF6010099.031Tursiops_truncatus
ENSCLAG00000009154PUF6010098.759ENSUAMG00000024917PUF6010098.759Ursus_americanus
ENSCLAG00000009154PUF609494.707ENSUMAG00000000272PUF609993.525Ursus_maritimus
ENSCLAG00000009154PUF609998.743ENSVVUG00000022527PUF6010099.806Vulpes_vulpes
ENSCLAG00000009154PUF609394.466ENSXETG00000012469puf609994.841Xenopus_tropicalis
ENSCLAG00000009154PUF609184.524ENSXCOG00000012355puf60b10085.714Xiphophorus_couchianus
ENSCLAG00000009154PUF609380.512ENSXMAG00000010507-9979.724Xiphophorus_maculatus
ENSCLAG00000009154PUF609384.250ENSXMAG00000001862puf60b10086.180Xiphophorus_maculatus

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