EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000009238 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 617 bases
Position: chrJH721894.1:8689996-8690612
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000013372	RNA_pol_Rpb5_N	PF03871.14	1.5e-16	1	1
ENSCLAP00000013372	RNA_pol_Rpb5_C	PF01191.19	1.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000013524	-	540	-	ENSCLAP00000013372	179 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000009238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000009238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000009238	-	100	77.073	ENSCLAG00000014874	-	98	77.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000009238	-	100	76.098	ENSG00000099817	POLR2E	96	86.822	Homo_sapiens
ENSCLAG00000009238	-	100	73.171	ENSAPOG00000002935	polr2eb	98	73.171	Acanthochromis_polyacanthus
ENSCLAG00000009238	-	100	76.585	ENSAMEG00000003159	POLR2E	98	76.585	Ailuropoda_melanoleuca
ENSCLAG00000009238	-	100	61.463	ENSACIG00000024371	polr2eb	97	61.463	Amphilophus_citrinellus
ENSCLAG00000009238	-	100	73.171	ENSAOCG00000018166	polr2eb	98	73.171	Amphiprion_ocellaris
ENSCLAG00000009238	-	100	73.171	ENSAPEG00000009000	polr2eb	98	73.171	Amphiprion_percula
ENSCLAG00000009238	-	100	73.171	ENSATEG00000023760	polr2eb	98	73.171	Anabas_testudineus
ENSCLAG00000009238	-	100	76.585	ENSANAG00000038488	POLR2E	98	76.585	Aotus_nancymaae
ENSCLAG00000009238	-	100	73.659	ENSACLG00000005254	polr2eb	98	73.659	Astatotilapia_calliptera
ENSCLAG00000009238	-	100	73.171	ENSAMXG00000018915	POLR2E	98	73.171	Astyanax_mexicanus
ENSCLAG00000009238	-	100	76.585	ENSBTAG00000020776	POLR2E	98	76.585	Bos_taurus
ENSCLAG00000009238	-	100	59.512	WBGene00019246	rpb-5	97	59.512	Caenorhabditis_elegans
ENSCLAG00000009238	-	72	86.822	ENSCJAG00000007666	-	71	86.822	Callithrix_jacchus
ENSCLAG00000009238	-	100	74.146	ENSCAFG00000019546	POLR2E	98	74.146	Canis_familiaris
ENSCLAG00000009238	-	100	76.585	ENSCAFG00020017111	POLR2E	98	76.585	Canis_lupus_dingo
ENSCLAG00000009238	-	100	76.585	ENSCHIG00000014151	POLR2E	98	76.585	Capra_hircus
ENSCLAG00000009238	-	100	60.952	ENSTSYG00000026377	POLR2E	97	60.952	Carlito_syrichta
ENSCLAG00000009238	-	91	76.064	ENSCAPG00000010843	POLR2E	91	76.064	Cavia_aperea
ENSCLAG00000009238	-	100	76.585	ENSCPOG00000001542	POLR2E	98	76.585	Cavia_porcellus
ENSCLAG00000009238	-	100	76.585	ENSCCAG00000025658	POLR2E	98	76.585	Cebus_capucinus
ENSCLAG00000009238	-	100	76.585	ENSCATG00000008926	POLR2E	98	76.585	Cercocebus_atys
ENSCLAG00000009238	-	100	76.585	ENSCSAG00000012336	POLR2E	98	76.585	Chlorocebus_sabaeus
ENSCLAG00000009238	-	100	76.098	ENSCPBG00000009702	POLR2E	98	76.098	Chrysemys_picta_bellii
ENSCLAG00000009238	-	100	65.366	ENSCING00000024933	-	97	65.366	Ciona_intestinalis
ENSCLAG00000009238	-	100	76.585	ENSCANG00000025560	POLR2E	98	76.585	Colobus_angolensis_palliatus
ENSCLAG00000009238	-	100	75.610	ENSCGRG00001022927	Polr2e	98	75.610	Cricetulus_griseus_chok1gshd
ENSCLAG00000009238	-	100	70.000	ENSCGRG00000016441	Polr2e	98	70.000	Cricetulus_griseus_crigri
ENSCLAG00000009238	-	100	72.683	ENSCSEG00000007107	polr2eb	90	72.683	Cynoglossus_semilaevis
ENSCLAG00000009238	-	100	73.171	ENSCVAG00000019940	polr2eb	98	73.171	Cyprinodon_variegatus
ENSCLAG00000009238	-	100	72.683	ENSDARG00000026183	polr2eb	98	72.683	Danio_rerio
ENSCLAG00000009238	-	91	76.190	ENSDNOG00000044994	POLR2E	83	76.190	Dasypus_novemcinctus
ENSCLAG00000009238	-	100	76.585	ENSDORG00000001154	Polr2e	98	76.585	Dipodomys_ordii
ENSCLAG00000009238	-	100	65.366	FBgn0033571	Rpb5	98	65.366	Drosophila_melanogaster
ENSCLAG00000009238	-	73	67.949	ENSEBUG00000010159	-	76	67.949	Eptatretus_burgeri
ENSCLAG00000009238	-	73	86.154	ENSEASG00005021615	POLR2E	62	80.420	Equus_asinus_asinus
ENSCLAG00000009238	-	92	75.789	ENSECAG00000011124	POLR2E	97	64.390	Equus_caballus
ENSCLAG00000009238	-	100	71.220	ENSELUG00000020646	polr2e	98	71.220	Esox_lucius
ENSCLAG00000009238	-	100	72.195	ENSELUG00000005815	POLR2E	98	72.195	Esox_lucius
ENSCLAG00000009238	-	100	76.098	ENSFCAG00000007318	POLR2E	98	76.098	Felis_catus
ENSCLAG00000009238	-	91	75.532	ENSFALG00000013986	POLR2E	97	75.532	Ficedula_albicollis
ENSCLAG00000009238	-	100	76.585	ENSFDAG00000014539	POLR2E	98	76.585	Fukomys_damarensis
ENSCLAG00000009238	-	100	73.171	ENSFHEG00000022398	polr2eb	98	73.171	Fundulus_heteroclitus
ENSCLAG00000009238	-	100	72.195	ENSGMOG00000007615	polr2eb	98	72.195	Gadus_morhua
ENSCLAG00000009238	-	100	76.098	ENSGALG00000002591	POLR2E	98	76.098	Gallus_gallus
ENSCLAG00000009238	-	100	73.659	ENSGAFG00000005087	polr2eb	98	73.659	Gambusia_affinis
ENSCLAG00000009238	-	100	72.683	ENSGACG00000013247	polr2eb	98	72.683	Gasterosteus_aculeatus
ENSCLAG00000009238	-	100	76.098	ENSGAGG00000008356	POLR2E	98	76.098	Gopherus_agassizii
ENSCLAG00000009238	-	100	76.585	ENSGGOG00000011267	POLR2E	98	76.585	Gorilla_gorilla
ENSCLAG00000009238	-	72	83.721	ENSHBUG00000011099	polr2eb	93	83.721	Haplochromis_burtoni
ENSCLAG00000009238	-	100	76.098	ENSHGLG00000013330	POLR2E	98	76.098	Heterocephalus_glaber_female
ENSCLAG00000009238	-	100	76.098	ENSHGLG00100011014	POLR2E	98	76.098	Heterocephalus_glaber_male
ENSCLAG00000009238	-	100	71.707	ENSHCOG00000000906	polr2eb	98	71.707	Hippocampus_comes
ENSCLAG00000009238	-	100	73.171	ENSIPUG00000019801	polr2e	98	73.171	Ictalurus_punctatus
ENSCLAG00000009238	-	100	76.585	ENSSTOG00000002853	POLR2E	98	76.585	Ictidomys_tridecemlineatus
ENSCLAG00000009238	-	74	60.759	ENSJJAG00000015812	-	99	60.759	Jaculus_jaculus
ENSCLAG00000009238	-	100	58.537	ENSJJAG00000003145	-	97	58.537	Jaculus_jaculus
ENSCLAG00000009238	-	100	75.610	ENSJJAG00000016595	-	98	75.610	Jaculus_jaculus
ENSCLAG00000009238	-	100	73.171	ENSKMAG00000005954	polr2eb	98	73.171	Kryptolebias_marmoratus
ENSCLAG00000009238	-	100	73.171	ENSLBEG00000024802	polr2eb	98	73.171	Labrus_bergylta
ENSCLAG00000009238	-	100	73.171	ENSLACG00000013686	POLR2E	98	73.171	Latimeria_chalumnae
ENSCLAG00000009238	-	75	72.050	ENSLOCG00000004599	POLR2E	99	72.050	Lepisosteus_oculatus
ENSCLAG00000009238	-	100	65.854	ENSLAFG00000025587	POLR2E	98	65.854	Loxodonta_africana
ENSCLAG00000009238	-	100	76.585	ENSMFAG00000002884	POLR2E	98	76.585	Macaca_fascicularis
ENSCLAG00000009238	-	100	76.585	ENSMMUG00000013927	POLR2E	98	76.585	Macaca_mulatta
ENSCLAG00000009238	-	100	76.585	ENSMNEG00000034046	-	98	76.585	Macaca_nemestrina
ENSCLAG00000009238	-	100	51.000	ENSMNEG00000033452	-	97	51.000	Macaca_nemestrina
ENSCLAG00000009238	-	91	70.552	ENSMLEG00000012405	POLR2E	92	70.552	Mandrillus_leucophaeus
ENSCLAG00000009238	-	100	73.171	ENSMAMG00000018703	polr2eb	98	73.171	Mastacembelus_armatus
ENSCLAG00000009238	-	91	73.016	ENSMZEG00005010796	polr2eb	95	73.016	Maylandia_zebra
ENSCLAG00000009238	-	100	75.243	ENSMGAG00000003769	POLR2E	98	75.243	Meleagris_gallopavo
ENSCLAG00000009238	-	100	63.187	ENSMAUG00000011003	-	97	63.187	Mesocricetus_auratus
ENSCLAG00000009238	-	91	74.603	ENSMAUG00000010125	-	98	75.401	Mesocricetus_auratus
ENSCLAG00000009238	-	100	76.585	ENSMICG00000013063	POLR2E	98	76.585	Microcebus_murinus
ENSCLAG00000009238	-	100	75.610	ENSMOCG00000013414	Polr2e	98	75.610	Microtus_ochrogaster
ENSCLAG00000009238	-	100	60.488	ENSMMOG00000001161	polr2eb	97	60.488	Mola_mola
ENSCLAG00000009238	-	90	66.310	ENSMMOG00000001167	polr2eb	86	66.310	Mola_mola
ENSCLAG00000009238	-	100	76.098	ENSMODG00000005494	POLR2E	98	76.098	Monodelphis_domestica
ENSCLAG00000009238	-	100	73.659	ENSMALG00000021888	polr2eb	98	73.659	Monopterus_albus
ENSCLAG00000009238	-	100	75.610	MGP_CAROLIEiJ_G0015561	Polr2e	98	75.610	Mus_caroli
ENSCLAG00000009238	-	100	75.610	ENSMUSG00000004667	Polr2e	98	75.610	Mus_musculus
ENSCLAG00000009238	-	100	75.610	MGP_PahariEiJ_G0030974	Polr2e	98	75.610	Mus_pahari
ENSCLAG00000009238	-	100	75.610	MGP_SPRETEiJ_G0016379	Polr2e	98	75.610	Mus_spretus
ENSCLAG00000009238	-	100	75.610	ENSMPUG00000008953	POLR2E	98	75.610	Mustela_putorius_furo
ENSCLAG00000009238	-	62	70.803	ENSMLUG00000006376	-	99	62.733	Myotis_lucifugus
ENSCLAG00000009238	-	100	76.585	ENSMLUG00000013193	POLR2E	98	76.585	Myotis_lucifugus
ENSCLAG00000009238	-	85	60.819	ENSNGAG00000017344	-	96	60.819	Nannospalax_galili
ENSCLAG00000009238	-	100	75.610	ENSNGAG00000001147	Polr2e	98	75.610	Nannospalax_galili
ENSCLAG00000009238	-	100	61.463	ENSNBRG00000022772	polr2eb	97	61.463	Neolamprologus_brichardi
ENSCLAG00000009238	-	100	72.816	ENSNLEG00000001207	-	98	72.816	Nomascus_leucogenys
ENSCLAG00000009238	-	100	59.512	ENSNLEG00000031364	-	97	59.512	Nomascus_leucogenys
ENSCLAG00000009238	-	100	64.390	ENSOPRG00000008331	POLR2E	98	64.390	Ochotona_princeps
ENSCLAG00000009238	-	100	52.683	ENSODEG00000011490	-	97	52.683	Octodon_degus
ENSCLAG00000009238	-	100	76.585	ENSODEG00000013230	-	98	76.585	Octodon_degus
ENSCLAG00000009238	-	89	68.649	ENSODEG00000007985	-	99	68.649	Octodon_degus
ENSCLAG00000009238	-	100	73.171	ENSONIG00000002519	polr2eb	98	73.171	Oreochromis_niloticus
ENSCLAG00000009238	-	100	73.659	ENSORLG00000015346	polr2eb	98	73.659	Oryzias_latipes
ENSCLAG00000009238	-	100	73.659	ENSORLG00020020700	polr2e	98	73.659	Oryzias_latipes_hni
ENSCLAG00000009238	-	100	73.659	ENSORLG00015016842	polr2e	98	73.659	Oryzias_latipes_hsok
ENSCLAG00000009238	-	100	73.171	ENSOMEG00000002709	polr2eb	98	73.171	Oryzias_melastigma
ENSCLAG00000009238	-	100	76.585	ENSOGAG00000012311	POLR2E	98	76.585	Otolemur_garnettii
ENSCLAG00000009238	-	100	76.585	ENSOARG00000010994	POLR2E	98	76.585	Ovis_aries
ENSCLAG00000009238	-	91	76.064	ENSPPAG00000003145	POLR2E	98	76.471	Pan_paniscus
ENSCLAG00000009238	-	100	76.098	ENSPPRG00000000777	POLR2E	98	76.098	Panthera_pardus
ENSCLAG00000009238	-	96	53.030	ENSPTIG00000012237	POLR2E	98	70.395	Panthera_tigris_altaica
ENSCLAG00000009238	-	100	76.585	ENSPTRG00000010183	POLR2E	98	76.585	Pan_troglodytes
ENSCLAG00000009238	-	100	76.585	ENSPANG00000018011	POLR2E	98	76.585	Papio_anubis
ENSCLAG00000009238	-	100	72.195	ENSPKIG00000009607	POLR2E	98	72.195	Paramormyrops_kingsleyae
ENSCLAG00000009238	-	100	73.171	ENSPKIG00000024123	POLR2E	98	73.171	Paramormyrops_kingsleyae
ENSCLAG00000009238	-	98	73.134	ENSPSIG00000002870	POLR2E	97	73.134	Pelodiscus_sinensis
ENSCLAG00000009238	-	100	60.976	ENSPMGG00000014354	polr2eb	97	60.976	Periophthalmus_magnuspinnatus
ENSCLAG00000009238	-	100	75.610	ENSPEMG00000023261	Polr2e	98	75.610	Peromyscus_maniculatus_bairdii
ENSCLAG00000009238	-	91	75.532	ENSPCIG00000007312	POLR2E	74	75.532	Phascolarctos_cinereus
ENSCLAG00000009238	-	100	73.659	ENSPFOG00000005734	polr2eb	98	73.659	Poecilia_formosa
ENSCLAG00000009238	-	100	73.659	ENSPLAG00000014496	polr2eb	98	73.659	Poecilia_latipinna
ENSCLAG00000009238	-	100	73.659	ENSPMEG00000008053	polr2eb	98	73.659	Poecilia_mexicana
ENSCLAG00000009238	-	100	73.659	ENSPREG00000006489	polr2eb	98	73.659	Poecilia_reticulata
ENSCLAG00000009238	-	100	70.388	ENSPPYG00000009305	POLR2E	98	70.388	Pongo_abelii
ENSCLAG00000009238	-	62	88.288	ENSPCAG00000016605	POLR2E	100	88.288	Procavia_capensis
ENSCLAG00000009238	-	100	76.585	ENSPCOG00000014491	POLR2E	98	76.585	Propithecus_coquereli
ENSCLAG00000009238	-	50	69.565	ENSPVAG00000007718	-	55	69.565	Pteropus_vampyrus
ENSCLAG00000009238	-	91	73.016	ENSPNYG00000019797	polr2eb	95	73.016	Pundamilia_nyererei
ENSCLAG00000009238	-	100	73.659	ENSPNAG00000026263	POLR2E	98	73.659	Pygocentrus_nattereri
ENSCLAG00000009238	-	100	75.610	ENSRNOG00000013545	Polr2e	98	75.610	Rattus_norvegicus
ENSCLAG00000009238	-	100	76.585	ENSRBIG00000028726	-	98	76.585	Rhinopithecus_bieti
ENSCLAG00000009238	-	100	58.738	ENSRBIG00000027259	-	97	58.738	Rhinopithecus_bieti
ENSCLAG00000009238	-	100	76.585	ENSRROG00000043763	POLR2E	98	76.585	Rhinopithecus_roxellana
ENSCLAG00000009238	-	100	37.799	YBR154C	RPB5	97	37.799	Saccharomyces_cerevisiae
ENSCLAG00000009238	-	100	76.585	ENSSBOG00000027241	POLR2E	98	76.585	Saimiri_boliviensis_boliviensis
ENSCLAG00000009238	-	100	76.098	ENSSHAG00000010690	POLR2E	98	76.098	Sarcophilus_harrisii
ENSCLAG00000009238	-	100	73.171	ENSSFOG00015006073	polr2e	98	73.171	Scleropages_formosus
ENSCLAG00000009238	-	100	73.171	ENSSMAG00000012782	polr2eb	98	73.171	Scophthalmus_maximus
ENSCLAG00000009238	-	100	73.171	ENSSDUG00000003352	polr2eb	98	73.171	Seriola_dumerili
ENSCLAG00000009238	-	100	73.171	ENSSLDG00000004965	polr2eb	98	73.171	Seriola_lalandi_dorsalis
ENSCLAG00000009238	-	100	74.634	ENSSPUG00000006114	POLR2E	98	74.634	Sphenodon_punctatus
ENSCLAG00000009238	-	100	73.171	ENSSPAG00000017556	polr2eb	98	73.171	Stegastes_partitus
ENSCLAG00000009238	-	100	76.585	ENSSSCG00000021472	POLR2E	98	76.585	Sus_scrofa
ENSCLAG00000009238	-	63	65.468	ENSTGUG00000000922	POLR2E	98	65.468	Taeniopygia_guttata
ENSCLAG00000009238	-	94	70.256	ENSTRUG00000018238	polr2eb	97	60.976	Takifugu_rubripes
ENSCLAG00000009238	-	100	73.171	ENSTNIG00000013187	polr2eb	98	73.171	Tetraodon_nigroviridis
ENSCLAG00000009238	-	100	76.098	ENSTTRG00000001484	POLR2E	98	76.098	Tursiops_truncatus
ENSCLAG00000009238	-	93	73.575	ENSUAMG00000009166	POLR2E	97	63.902	Ursus_americanus
ENSCLAG00000009238	-	100	76.585	ENSVVUG00000022818	POLR2E	53	76.585	Vulpes_vulpes
ENSCLAG00000009238	-	100	74.634	ENSXETG00000003291	polr2e	98	74.634	Xenopus_tropicalis
ENSCLAG00000009238	-	100	61.463	ENSXCOG00000009197	polr2eb	97	61.463	Xiphophorus_couchianus
ENSCLAG00000009238	-	100	73.659	ENSXMAG00000026495	polr2eb	98	73.659	Xiphophorus_maculatus