EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000009336 (Gene tree)
Gene ID: 102003563
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 15882 bases
Position: chrJH721955.1:1594531-1610412
Accession: 102003563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000013506	RRM_1	PF00076.22	2.2e-28	1	3
ENSCLAP00000013506	RRM_1	PF00076.22	2.2e-28	2	3
ENSCLAP00000013506	RRM_1	PF00076.22	2.2e-28	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000013660	RAVER1-201	4510	XM_005405591	ENSCLAP00000013506	738 (aa)	XP_005405648	-

Gene Model

Click here to download ENSCLAG00000009336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000009336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000009336	RAVER1	60	48.861	ENSCLAG00000006590	RAVER2	84	49.174

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000009336	RAVER1	100	90.713	ENSG00000161847	RAVER1	100	91.117	Homo_sapiens
ENSCLAG00000009336	RAVER1	100	89.757	ENSAMEG00000011738	RAVER1	98	89.892	Ailuropoda_melanoleuca
ENSCLAG00000009336	RAVER1	77	59.155	ENSAOCG00000005128	raver1	88	50.345	Amphiprion_ocellaris
ENSCLAG00000009336	RAVER1	74	75.439	ENSAPEG00000010854	raver1	80	78.846	Amphiprion_percula
ENSCLAG00000009336	RAVER1	98	50.744	ENSATEG00000021004	raver1	93	50.474	Anabas_testudineus
ENSCLAG00000009336	RAVER1	83	60.217	ENSACAG00000008386	-	91	59.517	Anolis_carolinensis
ENSCLAG00000009336	RAVER1	100	89.098	ENSANAG00000028226	RAVER1	98	90.175	Aotus_nancymaae
ENSCLAG00000009336	RAVER1	80	58.025	ENSAMXG00000005132	raver1	93	51.366	Astyanax_mexicanus
ENSCLAG00000009336	RAVER1	100	94.000	ENSBTAG00000015721	RAVER1	97	94.000	Bos_taurus
ENSCLAG00000009336	RAVER1	100	89.367	ENSCJAG00000005671	RAVER1	98	90.444	Callithrix_jacchus
ENSCLAG00000009336	RAVER1	100	88.544	ENSCAFG00000017861	RAVER1	98	88.949	Canis_familiaris
ENSCLAG00000009336	RAVER1	100	88.544	ENSCAFG00020024449	RAVER1	100	88.949	Canis_lupus_dingo
ENSCLAG00000009336	RAVER1	100	88.544	ENSCHIG00000006718	RAVER1	100	88.679	Capra_hircus
ENSCLAG00000009336	RAVER1	91	83.628	ENSTSYG00000027107	RAVER1	100	84.071	Carlito_syrichta
ENSCLAG00000009336	RAVER1	90	90.135	ENSCAPG00000002269	RAVER1	100	90.882	Cavia_aperea
ENSCLAG00000009336	RAVER1	100	93.127	ENSCPOG00000001008	RAVER1	100	93.666	Cavia_porcellus
ENSCLAG00000009336	RAVER1	100	89.233	ENSCCAG00000031723	RAVER1	98	90.579	Cebus_capucinus
ENSCLAG00000009336	RAVER1	100	90.579	ENSCATG00000043863	RAVER1	98	91.790	Cercocebus_atys
ENSCLAG00000009336	RAVER1	100	90.713	ENSCSAG00000007317	RAVER1	84	91.925	Chlorocebus_sabaeus
ENSCLAG00000009336	RAVER1	96	61.954	ENSCPBG00000005349	-	96	61.954	Chrysemys_picta_bellii
ENSCLAG00000009336	RAVER1	100	90.444	ENSCANG00000008337	RAVER1	98	91.655	Colobus_angolensis_palliatus
ENSCLAG00000009336	RAVER1	100	90.579	ENSCGRG00001013260	-	100	90.983	Cricetulus_griseus_chok1gshd
ENSCLAG00000009336	RAVER1	100	90.579	ENSCGRG00000015138	-	100	90.983	Cricetulus_griseus_crigri
ENSCLAG00000009336	RAVER1	74	78.846	ENSCSEG00000021092	raver1	76	78.846	Cynoglossus_semilaevis
ENSCLAG00000009336	RAVER1	97	50.136	ENSCVAG00000013971	raver1	91	51.111	Cyprinodon_variegatus
ENSCLAG00000009336	RAVER1	66	59.118	ENSDARG00000052617	raver1	91	51.105	Danio_rerio
ENSCLAG00000009336	RAVER1	100	82.740	ENSDORG00000010106	-	100	82.477	Dipodomys_ordii
ENSCLAG00000009336	RAVER1	66	74.074	ENSETEG00000008201	-	76	87.437	Echinops_telfairi
ENSCLAG00000009336	RAVER1	66	94.541	ENSEASG00005010544	-	90	89.655	Equus_asinus_asinus
ENSCLAG00000009336	RAVER1	100	90.970	ENSECAG00000024966	RAVER1	98	92.183	Equus_caballus
ENSCLAG00000009336	RAVER1	97	51.719	ENSELUG00000023287	raver1	91	53.343	Esox_lucius
ENSCLAG00000009336	RAVER1	100	91.779	ENSFCAG00000009435	RAVER1	98	91.914	Felis_catus
ENSCLAG00000009336	RAVER1	100	92.992	ENSFDAG00000015113	RAVER1	100	93.127	Fukomys_damarensis
ENSCLAG00000009336	RAVER1	98	50.943	ENSGMOG00000003649	raver1	83	60.206	Gadus_morhua
ENSCLAG00000009336	RAVER1	79	42.429	ENSGALG00000050608	-	62	41.167	Gallus_gallus
ENSCLAG00000009336	RAVER1	100	50.330	ENSGAFG00000015944	raver1	91	50.000	Gambusia_affinis
ENSCLAG00000009336	RAVER1	81	77.971	ENSGAGG00000011748	-	96	77.937	Gopherus_agassizii
ENSCLAG00000009336	RAVER1	100	90.713	ENSGGOG00000006015	RAVER1	98	91.117	Gorilla_gorilla
ENSCLAG00000009336	RAVER1	100	93.396	ENSHGLG00000015460	RAVER1	100	93.801	Heterocephalus_glaber_female
ENSCLAG00000009336	RAVER1	100	93.396	ENSHGLG00100000812	RAVER1	100	93.801	Heterocephalus_glaber_male
ENSCLAG00000009336	RAVER1	96	50.345	ENSHCOG00000000449	raver1	89	49.930	Hippocampus_comes
ENSCLAG00000009336	RAVER1	98	51.078	ENSIPUG00000013153	raver1	81	61.866	Ictalurus_punctatus
ENSCLAG00000009336	RAVER1	100	90.323	ENSSTOG00000003241	RAVER1	100	91.129	Ictidomys_tridecemlineatus
ENSCLAG00000009336	RAVER1	100	90.457	ENSJJAG00000018219	-	100	90.054	Jaculus_jaculus
ENSCLAG00000009336	RAVER1	98	49.202	ENSKMAG00000017355	raver1	91	50.000	Kryptolebias_marmoratus
ENSCLAG00000009336	RAVER1	68	58.317	ENSLBEG00000008268	raver1	68	59.918	Labrus_bergylta
ENSCLAG00000009336	RAVER1	90	60.689	ENSLACG00000005809	-	99	60.658	Latimeria_chalumnae
ENSCLAG00000009336	RAVER1	96	56.216	ENSLOCG00000007500	raver1	94	55.673	Lepisosteus_oculatus
ENSCLAG00000009336	RAVER1	100	90.701	ENSLAFG00000003664	-	100	90.836	Loxodonta_africana
ENSCLAG00000009336	RAVER1	100	90.175	ENSMFAG00000037977	RAVER1	98	91.386	Macaca_fascicularis
ENSCLAG00000009336	RAVER1	100	90.444	ENSMMUG00000014897	RAVER1	98	91.655	Macaca_mulatta
ENSCLAG00000009336	RAVER1	100	90.444	ENSMNEG00000028390	RAVER1	98	91.655	Macaca_nemestrina
ENSCLAG00000009336	RAVER1	100	90.579	ENSMLEG00000041959	RAVER1	98	91.790	Mandrillus_leucophaeus
ENSCLAG00000009336	RAVER1	75	79.245	ENSMAMG00000012059	raver1	78	79.245	Mastacembelus_armatus
ENSCLAG00000009336	RAVER1	100	90.201	ENSMAUG00000017948	-	100	90.067	Mesocricetus_auratus
ENSCLAG00000009336	RAVER1	99	89.339	ENSMICG00000010326	RAVER1	99	89.339	Microcebus_murinus
ENSCLAG00000009336	RAVER1	100	90.579	ENSMOCG00000015553	-	100	90.983	Microtus_ochrogaster
ENSCLAG00000009336	RAVER1	98	50.811	ENSMMOG00000012093	raver1	74	85.417	Mola_mola
ENSCLAG00000009336	RAVER1	97	74.621	ENSMODG00000005584	-	89	74.621	Monodelphis_domestica
ENSCLAG00000009336	RAVER1	100	88.919	MGP_CAROLIEiJ_G0031860	-	100	88.652	Mus_caroli
ENSCLAG00000009336	RAVER1	100	88.785	ENSMUSG00000010205	Raver1	100	89.319	Mus_musculus
ENSCLAG00000009336	RAVER1	100	87.782	MGP_PahariEiJ_G0014726	-	100	88.313	Mus_pahari
ENSCLAG00000009336	RAVER1	100	88.652	MGP_SPRETEiJ_G0032984	-	100	89.186	Mus_spretus
ENSCLAG00000009336	RAVER1	100	91.644	ENSMPUG00000006712	RAVER1	98	91.509	Mustela_putorius_furo
ENSCLAG00000009336	RAVER1	100	87.871	ENSMLUG00000012328	RAVER1	100	88.275	Myotis_lucifugus
ENSCLAG00000009336	RAVER1	100	88.694	ENSNGAG00000001260	-	100	89.098	Nannospalax_galili
ENSCLAG00000009336	RAVER1	76	63.750	ENSNBRG00000010139	raver1	91	45.667	Neolamprologus_brichardi
ENSCLAG00000009336	RAVER1	100	89.637	ENSNLEG00000012181	RAVER1	98	90.848	Nomascus_leucogenys
ENSCLAG00000009336	RAVER1	90	74.702	ENSMEUG00000003281	-	100	74.554	Notamacropus_eugenii
ENSCLAG00000009336	RAVER1	51	88.281	ENSOPRG00000005855	-	51	85.156	Ochotona_princeps
ENSCLAG00000009336	RAVER1	100	96.612	ENSODEG00000016260	RAVER1	100	96.612	Octodon_degus
ENSCLAG00000009336	RAVER1	96	50.902	ENSONIG00000001559	raver1	99	50.759	Oreochromis_niloticus
ENSCLAG00000009336	RAVER1	100	83.288	ENSOCUG00000020918	RAVER1	98	83.962	Oryctolagus_cuniculus
ENSCLAG00000009336	RAVER1	68	66.504	ENSORLG00000005458	raver1	67	67.506	Oryzias_latipes
ENSCLAG00000009336	RAVER1	68	66.259	ENSORLG00020004392	raver1	67	67.254	Oryzias_latipes_hni
ENSCLAG00000009336	RAVER1	68	66.015	ENSORLG00015017222	raver1	67	67.003	Oryzias_latipes_hsok
ENSCLAG00000009336	RAVER1	72	81.633	ENSOMEG00000023956	raver1	79	81.633	Oryzias_melastigma
ENSCLAG00000009336	RAVER1	100	89.488	ENSOGAG00000011071	RAVER1	98	89.757	Otolemur_garnettii
ENSCLAG00000009336	RAVER1	100	86.000	ENSOARG00000015886	RAVER1	98	87.332	Ovis_aries
ENSCLAG00000009336	RAVER1	100	90.713	ENSPPAG00000002611	RAVER1	98	91.117	Pan_paniscus
ENSCLAG00000009336	RAVER1	100	92.183	ENSPPRG00000009912	RAVER1	98	92.318	Panthera_pardus
ENSCLAG00000009336	RAVER1	100	90.713	ENSPTRG00000010466	RAVER1	98	91.117	Pan_troglodytes
ENSCLAG00000009336	RAVER1	100	90.444	ENSPANG00000004122	RAVER1	98	91.655	Papio_anubis
ENSCLAG00000009336	RAVER1	100	90.860	ENSPEMG00000016411	-	100	91.667	Peromyscus_maniculatus_bairdii
ENSCLAG00000009336	RAVER1	100	76.573	ENSPCIG00000018695	-	100	76.573	Phascolarctos_cinereus
ENSCLAG00000009336	RAVER1	60	70.520	ENSPLAG00000020793	raver1	78	57.769	Poecilia_latipinna
ENSCLAG00000009336	RAVER1	96	51.374	ENSPMEG00000011220	raver1	67	68.020	Poecilia_mexicana
ENSCLAG00000009336	RAVER1	71	88.372	ENSPREG00000006864	raver1	76	88.372	Poecilia_reticulata
ENSCLAG00000009336	RAVER1	100	88.679	ENSPPYG00000010514	RAVER1	84	90.310	Pongo_abelii
ENSCLAG00000009336	RAVER1	100	91.117	ENSPCOG00000026605	RAVER1	98	91.790	Propithecus_coquereli
ENSCLAG00000009336	RAVER1	100	90.296	ENSPVAG00000003689	RAVER1	100	91.105	Pteropus_vampyrus
ENSCLAG00000009336	RAVER1	62	82.353	ENSPNYG00000013284	raver1	65	82.353	Pundamilia_nyererei
ENSCLAG00000009336	RAVER1	96	51.425	ENSPNAG00000015476	raver1	91	50.956	Pygocentrus_nattereri
ENSCLAG00000009336	RAVER1	100	88.518	ENSRNOG00000020710	Raver1	100	88.785	Rattus_norvegicus
ENSCLAG00000009336	RAVER1	100	90.983	ENSRBIG00000034702	RAVER1	98	91.790	Rhinopithecus_bieti
ENSCLAG00000009336	RAVER1	100	88.694	ENSRROG00000031186	RAVER1	98	88.829	Rhinopithecus_roxellana
ENSCLAG00000009336	RAVER1	100	87.214	ENSSBOG00000023423	RAVER1	98	87.618	Saimiri_boliviensis_boliviensis
ENSCLAG00000009336	RAVER1	90	75.074	ENSSHAG00000008181	-	90	74.779	Sarcophilus_harrisii
ENSCLAG00000009336	RAVER1	67	58.135	ENSSMAG00000004546	raver1	66	59.677	Scophthalmus_maximus
ENSCLAG00000009336	RAVER1	82	56.792	ENSSDUG00000021063	raver1	80	82.000	Seriola_dumerili
ENSCLAG00000009336	RAVER1	100	90.701	ENSSSCG00000013650	-	98	91.779	Sus_scrofa
ENSCLAG00000009336	RAVER1	99	48.701	ENSTRUG00000025641	raver1	91	49.931	Takifugu_rubripes
ENSCLAG00000009336	RAVER1	100	90.296	ENSTTRG00000009552	RAVER1	100	91.105	Tursiops_truncatus
ENSCLAG00000009336	RAVER1	100	91.779	ENSUAMG00000020385	RAVER1	98	91.914	Ursus_americanus
ENSCLAG00000009336	RAVER1	100	88.544	ENSVVUG00000028976	RAVER1	98	88.949	Vulpes_vulpes
ENSCLAG00000009336	RAVER1	100	55.774	ENSXETG00000011622	raver1	100	55.204	Xenopus_tropicalis
ENSCLAG00000009336	RAVER1	99	48.942	ENSXCOG00000016368	raver1	68	64.183	Xiphophorus_couchianus
ENSCLAG00000009336	RAVER1	99	50.337	ENSXMAG00000000217	raver1	78	60.041	Xiphophorus_maculatus