EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000009470 (Gene tree)
Gene ID: 102028573
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 9958 bases
Position: chrJH721897.1:309032-318989
Accession: 102028573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000013706	tRNA-synt_1g	PF09334.11	3.7e-11	1	1
ENSCLAP00000013706	Anticodon_1	PF08264.13	1.3e-31	1	1
ENSCLAP00000013706	tRNA-synt_1	PF00133.22	2.1e-201	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000013861	VARS-201	3720	XM_005389386	ENSCLAP00000013706	1239 (aa)	XP_005389443	-

Gene Model

Click here to download ENSCLAG00000009470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000009470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000009470	VARS	81	51.181	ENSCLAG00000002889	VARS2	91	51.083

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000009470	VARS	92	89.764	ENSG00000204394	VARS	99	82.822	Homo_sapiens
ENSCLAG00000009470	VARS	92	66.025	ENSAPOG00000020921	vars	88	66.963	Acanthochromis_polyacanthus
ENSCLAG00000009470	VARS	92	66.025	ENSAPOG00000020691	vars	88	66.963	Acanthochromis_polyacanthus
ENSCLAG00000009470	VARS	92	89.598	ENSAMEG00000006417	VARS	88	89.598	Ailuropoda_melanoleuca
ENSCLAG00000009470	VARS	97	64.492	ENSACIG00000013752	vars	92	64.628	Amphilophus_citrinellus
ENSCLAG00000009470	VARS	93	65.277	ENSAOCG00000002447	vars	89	65.506	Amphiprion_ocellaris
ENSCLAG00000009470	VARS	93	65.362	ENSAPEG00000010638	vars	89	65.590	Amphiprion_percula
ENSCLAG00000009470	VARS	97	62.479	ENSATEG00000020219	vars	93	63.380	Anabas_testudineus
ENSCLAG00000009470	VARS	83	72.095	ENSACAG00000029133	-	89	72.381	Anolis_carolinensis
ENSCLAG00000009470	VARS	95	87.799	ENSANAG00000015453	VARS	90	87.799	Aotus_nancymaae
ENSCLAG00000009470	VARS	97	63.369	ENSACLG00000025699	vars	89	63.584	Astatotilapia_calliptera
ENSCLAG00000009470	VARS	93	64.905	ENSAMXG00000017716	vars	89	64.905	Astyanax_mexicanus
ENSCLAG00000009470	VARS	91	89.655	ENSBTAG00000005631	VARS	88	89.501	Bos_taurus
ENSCLAG00000009470	VARS	92	89.151	ENSCJAG00000002604	VARS	88	89.151	Callithrix_jacchus
ENSCLAG00000009470	VARS	92	88.569	ENSCAFG00000000636	VARS	88	88.569	Canis_familiaris
ENSCLAG00000009470	VARS	87	89.114	ENSCAFG00020020790	VARS	86	89.114	Canis_lupus_dingo
ENSCLAG00000009470	VARS	91	89.478	ENSCHIG00000011008	VARS	88	89.326	Capra_hircus
ENSCLAG00000009470	VARS	92	89.589	ENSTSYG00000001567	VARS	88	89.589	Carlito_syrichta
ENSCLAG00000009470	VARS	94	91.065	ENSCAPG00000013736	VARS	98	91.065	Cavia_aperea
ENSCLAG00000009470	VARS	95	90.017	ENSCPOG00000000870	VARS	90	90.017	Cavia_porcellus
ENSCLAG00000009470	VARS	95	87.884	ENSCCAG00000035656	VARS	95	85.575	Cebus_capucinus
ENSCLAG00000009470	VARS	92	89.764	ENSCATG00000022394	VARS	95	83.333	Cercocebus_atys
ENSCLAG00000009470	VARS	92	89.764	ENSCSAG00000008784	VARS	88	89.764	Chlorocebus_sabaeus
ENSCLAG00000009470	VARS	79	72.301	ENSCPBG00000007943	VARS	94	72.211	Chrysemys_picta_bellii
ENSCLAG00000009470	VARS	92	89.851	ENSCANG00000033570	VARS	88	89.851	Colobus_angolensis_palliatus
ENSCLAG00000009470	VARS	96	86.307	ENSCGRG00001005686	Vars	93	86.307	Cricetulus_griseus_chok1gshd
ENSCLAG00000009470	VARS	95	82.862	ENSCGRG00000013352	Vars	76	82.862	Cricetulus_griseus_crigri
ENSCLAG00000009470	VARS	92	65.559	ENSCSEG00000019652	vars	89	65.997	Cynoglossus_semilaevis
ENSCLAG00000009470	VARS	97	64.222	ENSCVAG00000022398	vars	93	64.634	Cyprinodon_variegatus
ENSCLAG00000009470	VARS	97	63.282	ENSDARG00000044575	vars	93	64.052	Danio_rerio
ENSCLAG00000009470	VARS	85	90.047	ENSDORG00000016433	Vars	92	90.047	Dipodomys_ordii
ENSCLAG00000009470	VARS	68	86.207	ENSETEG00000003824	VARS	74	86.207	Echinops_telfairi
ENSCLAG00000009470	VARS	59	60.136	ENSEBUG00000004637	vars	97	60.408	Eptatretus_burgeri
ENSCLAG00000009470	VARS	50	70.909	ENSEBUG00000007086	vars	82	69.792	Eptatretus_burgeri
ENSCLAG00000009470	VARS	92	89.939	ENSEASG00005015673	VARS	88	89.939	Equus_asinus_asinus
ENSCLAG00000009470	VARS	92	89.248	ENSECAG00000014620	VARS	88	89.773	Equus_caballus
ENSCLAG00000009470	VARS	73	87.019	ENSEEUG00000004116	VARS	72	87.019	Erinaceus_europaeus
ENSCLAG00000009470	VARS	93	65.228	ENSELUG00000006550	vars	88	65.482	Esox_lucius
ENSCLAG00000009470	VARS	92	89.239	ENSFCAG00000004510	VARS	88	89.239	Felis_catus
ENSCLAG00000009470	VARS	81	92.500	ENSFDAG00000011401	VARS	97	92.500	Fukomys_damarensis
ENSCLAG00000009470	VARS	92	66.212	ENSFHEG00000010672	vars	89	66.723	Fundulus_heteroclitus
ENSCLAG00000009470	VARS	93	63.956	ENSGMOG00000014908	vars	94	64.815	Gadus_morhua
ENSCLAG00000009470	VARS	97	64.245	ENSGAFG00000021630	vars	93	64.548	Gambusia_affinis
ENSCLAG00000009470	VARS	93	64.268	ENSGACG00000009601	vars	94	64.492	Gasterosteus_aculeatus
ENSCLAG00000009470	VARS	92	89.501	ENSGGOG00000011364	VARS	88	89.501	Gorilla_gorilla
ENSCLAG00000009470	VARS	97	63.532	ENSHBUG00000017151	vars	89	63.748	Haplochromis_burtoni
ENSCLAG00000009470	VARS	95	88.055	ENSHGLG00000011646	VARS	90	88.140	Heterocephalus_glaber_female
ENSCLAG00000009470	VARS	95	83.106	ENSHGLG00100018062	VARS	96	83.106	Heterocephalus_glaber_male
ENSCLAG00000009470	VARS	97	63.391	ENSHCOG00000012198	vars	93	63.689	Hippocampus_comes
ENSCLAG00000009470	VARS	97	63.934	ENSIPUG00000005218	vars	93	63.934	Ictalurus_punctatus
ENSCLAG00000009470	VARS	95	88.917	ENSSTOG00000013112	VARS	90	88.917	Ictidomys_tridecemlineatus
ENSCLAG00000009470	VARS	96	85.133	ENSJJAG00000019749	-	93	85.216	Jaculus_jaculus
ENSCLAG00000009470	VARS	95	71.587	ENSJJAG00000015343	-	92	71.331	Jaculus_jaculus
ENSCLAG00000009470	VARS	97	63.524	ENSKMAG00000009455	vars	92	63.606	Kryptolebias_marmoratus
ENSCLAG00000009470	VARS	92	65.290	ENSLBEG00000010341	vars	89	66.082	Labrus_bergylta
ENSCLAG00000009470	VARS	89	62.445	ENSLACG00000015232	VARS	90	63.242	Latimeria_chalumnae
ENSCLAG00000009470	VARS	93	67.350	ENSLOCG00000004240	vars	90	67.635	Lepisosteus_oculatus
ENSCLAG00000009470	VARS	92	88.364	ENSLAFG00000023090	VARS	88	88.714	Loxodonta_africana
ENSCLAG00000009470	VARS	92	89.764	ENSMFAG00000001032	VARS	88	89.764	Macaca_fascicularis
ENSCLAG00000009470	VARS	92	89.764	ENSMMUG00000006828	VARS	88	89.764	Macaca_mulatta
ENSCLAG00000009470	VARS	92	89.939	ENSMNEG00000042072	VARS	88	89.939	Macaca_nemestrina
ENSCLAG00000009470	VARS	92	89.676	ENSMLEG00000039307	VARS	88	89.676	Mandrillus_leucophaeus
ENSCLAG00000009470	VARS	93	64.915	ENSMAMG00000003949	vars	90	65.228	Mastacembelus_armatus
ENSCLAG00000009470	VARS	97	63.369	ENSMZEG00005018327	vars	92	63.114	Maylandia_zebra
ENSCLAG00000009470	VARS	96	86.307	ENSMAUG00000006715	Vars	93	86.307	Mesocricetus_auratus
ENSCLAG00000009470	VARS	92	89.239	ENSMICG00000003548	VARS	95	86.064	Microcebus_murinus
ENSCLAG00000009470	VARS	89	88.788	ENSMOCG00000015404	Vars	87	89.060	Microtus_ochrogaster
ENSCLAG00000009470	VARS	97	63.397	ENSMMOG00000015801	vars	92	63.149	Mola_mola
ENSCLAG00000009470	VARS	95	81.826	ENSMODG00000015204	-	90	81.826	Monodelphis_domestica
ENSCLAG00000009470	VARS	94	64.736	ENSMALG00000022532	vars	91	64.958	Monopterus_albus
ENSCLAG00000009470	VARS	96	86.529	MGP_CAROLIEiJ_G0021491	Vars	93	86.860	Mus_caroli
ENSCLAG00000009470	VARS	98	85.656	ENSMUSG00000007029	Vars	93	86.860	Mus_musculus
ENSCLAG00000009470	VARS	96	86.232	MGP_PahariEiJ_G0020486	Vars	93	86.562	Mus_pahari
ENSCLAG00000009470	VARS	98	85.599	MGP_SPRETEiJ_G0022396	Vars	93	86.942	Mus_spretus
ENSCLAG00000009470	VARS	92	89.064	ENSMPUG00000010821	VARS	88	89.064	Mustela_putorius_furo
ENSCLAG00000009470	VARS	73	86.408	ENSMLUG00000013126	VARS	93	86.408	Myotis_lucifugus
ENSCLAG00000009470	VARS	98	85.749	ENSNGAG00000012151	Vars	93	87.137	Nannospalax_galili
ENSCLAG00000009470	VARS	97	63.287	ENSNBRG00000020520	vars	93	63.502	Neolamprologus_brichardi
ENSCLAG00000009470	VARS	92	89.589	ENSNLEG00000006351	VARS	88	89.589	Nomascus_leucogenys
ENSCLAG00000009470	VARS	95	78.413	ENSMEUG00000011378	VARS	90	78.413	Notamacropus_eugenii
ENSCLAG00000009470	VARS	93	89.351	ENSOPRG00000003607	VARS	89	89.351	Ochotona_princeps
ENSCLAG00000009470	VARS	95	91.041	ENSODEG00000017681	VARS	90	91.041	Octodon_degus
ENSCLAG00000009470	VARS	97	63.659	ENSONIG00000013064	vars	98	65.919	Oreochromis_niloticus
ENSCLAG00000009470	VARS	69	82.663	ENSOANG00000005400	VARS	89	82.663	Ornithorhynchus_anatinus
ENSCLAG00000009470	VARS	95	85.860	ENSOCUG00000022463	VARS	90	85.860	Oryctolagus_cuniculus
ENSCLAG00000009470	VARS	97	64.123	ENSORLG00000013063	vars	93	64.338	Oryzias_latipes
ENSCLAG00000009470	VARS	97	64.513	ENSORLG00020003504	vars	93	64.816	Oryzias_latipes_hni
ENSCLAG00000009470	VARS	97	64.566	ENSORLG00015009001	vars	93	64.788	Oryzias_latipes_hsok
ENSCLAG00000009470	VARS	97	64.075	ENSOMEG00000015016	vars	93	64.379	Oryzias_melastigma
ENSCLAG00000009470	VARS	95	87.031	ENSOGAG00000007515	VARS	90	87.031	Otolemur_garnettii
ENSCLAG00000009470	VARS	92	89.676	ENSPPAG00000034012	VARS	88	89.676	Pan_paniscus
ENSCLAG00000009470	VARS	92	89.239	ENSPPRG00000014855	VARS	88	89.239	Panthera_pardus
ENSCLAG00000009470	VARS	86	89.765	ENSPTIG00000010462	VARS	91	89.739	Panthera_tigris_altaica
ENSCLAG00000009470	VARS	92	89.764	ENSPTRG00000017985	VARS	88	89.764	Pan_troglodytes
ENSCLAG00000009470	VARS	92	87.881	ENSPANG00000014565	VARS	88	87.881	Papio_anubis
ENSCLAG00000009470	VARS	92	64.791	ENSPKIG00000016304	vars	93	63.072	Paramormyrops_kingsleyae
ENSCLAG00000009470	VARS	92	66.957	ENSPMGG00000023909	vars	89	67.393	Periophthalmus_magnuspinnatus
ENSCLAG00000009470	VARS	96	87.054	ENSPEMG00000006639	Vars	93	87.054	Peromyscus_maniculatus_bairdii
ENSCLAG00000009470	VARS	95	81.741	ENSPCIG00000018553	VARS	90	81.741	Phascolarctos_cinereus
ENSCLAG00000009470	VARS	97	64.245	ENSPFOG00000015690	vars	93	64.548	Poecilia_formosa
ENSCLAG00000009470	VARS	97	64.327	ENSPLAG00000009590	vars	93	64.629	Poecilia_latipinna
ENSCLAG00000009470	VARS	97	64.245	ENSPMEG00000004708	vars	93	64.548	Poecilia_mexicana
ENSCLAG00000009470	VARS	97	62.696	ENSPREG00000013264	vars	92	62.708	Poecilia_reticulata
ENSCLAG00000009470	VARS	92	87.577	ENSPPYG00000016460	VARS	88	87.577	Pongo_abelii
ENSCLAG00000009470	VARS	78	84.929	ENSPCAG00000013565	VARS	74	84.929	Procavia_capensis
ENSCLAG00000009470	VARS	92	89.161	ENSPCOG00000010942	VARS	88	89.685	Propithecus_coquereli
ENSCLAG00000009470	VARS	92	86.177	ENSPVAG00000012403	VARS	88	86.177	Pteropus_vampyrus
ENSCLAG00000009470	VARS	97	63.532	ENSPNYG00000022511	vars	93	63.748	Pundamilia_nyererei
ENSCLAG00000009470	VARS	97	63.659	ENSPNAG00000020962	vars	93	64.134	Pygocentrus_nattereri
ENSCLAG00000009470	VARS	96	86.694	ENSRNOG00000000867	Vars	93	86.694	Rattus_norvegicus
ENSCLAG00000009470	VARS	92	89.851	ENSRBIG00000041669	VARS	95	83.092	Rhinopithecus_bieti
ENSCLAG00000009470	VARS	92	89.851	ENSRROG00000045490	VARS	88	89.851	Rhinopithecus_roxellana
ENSCLAG00000009470	VARS	92	89.064	ENSSBOG00000035402	VARS	88	89.064	Saimiri_boliviensis_boliviensis
ENSCLAG00000009470	VARS	92	82.723	ENSSHAG00000006937	VARS	88	82.723	Sarcophilus_harrisii
ENSCLAG00000009470	VARS	96	64.251	ENSSFOG00015014272	vars	93	64.257	Scleropages_formosus
ENSCLAG00000009470	VARS	97	62.500	ENSSMAG00000009596	vars	92	63.154	Scophthalmus_maximus
ENSCLAG00000009470	VARS	97	63.510	ENSSDUG00000014177	vars	93	63.807	Seriola_dumerili
ENSCLAG00000009470	VARS	97	63.510	ENSSLDG00000025316	vars	93	63.725	Seriola_lalandi_dorsalis
ENSCLAG00000009470	VARS	93	64.979	ENSSPAG00000017068	vars	90	65.590	Stegastes_partitus
ENSCLAG00000009470	VARS	92	88.374	ENSSSCG00000038950	VARS	88	88.899	Sus_scrofa
ENSCLAG00000009470	VARS	77	66.144	ENSTRUG00000012307	vars	89	65.667	Takifugu_rubripes
ENSCLAG00000009470	VARS	97	63.937	ENSTNIG00000008011	vars	96	63.839	Tetraodon_nigroviridis
ENSCLAG00000009470	VARS	91	81.167	ENSTTRG00000014128	VARS	88	81.102	Tursiops_truncatus
ENSCLAG00000009470	VARS	92	85.826	ENSUAMG00000010424	VARS	88	85.826	Ursus_americanus
ENSCLAG00000009470	VARS	85	90.637	ENSUMAG00000013486	VARS	85	90.837	Ursus_maritimus
ENSCLAG00000009470	VARS	92	88.317	ENSVVUG00000021323	VARS	88	88.405	Vulpes_vulpes
ENSCLAG00000009470	VARS	93	62.511	ENSXETG00000024076	vars	90	62.478	Xenopus_tropicalis
ENSCLAG00000009470	VARS	92	66.407	ENSXCOG00000019172	vars	90	66.724	Xiphophorus_couchianus
ENSCLAG00000009470	VARS	97	64.000	ENSXMAG00000010927	vars	93	64.303	Xiphophorus_maculatus