EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000009583 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 14653 bases
Position: chrJH721912.1:13267968-13282620
Accession: 102022877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000013857	RRM_1	PF00076.22	2.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000014013	-	8046	XM_005395311	ENSCLAP00000013857	351 (aa)	XP_005395368	UPI00005309E6

Gene Model

Click here to download ENSCLAG00000009583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000009583's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000009583	-	100	57.465	ENSCLAG00000003642	NONO	50	73.950
ENSCLAG00000009583	-	80	67.832	ENSCLAG00000005241	PSPC1	85	55.897

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000009583	-	100	100.000	ENSG00000116560	SFPQ	97	100.000	Homo_sapiens
ENSCLAG00000009583	-	100	100.000	ENSAMEG00000000815	SFPQ	80	100.000	Ailuropoda_melanoleuca
ENSCLAG00000009583	-	100	70.455	ENSACIG00000000905	sfpq	55	71.023	Amphilophus_citrinellus
ENSCLAG00000009583	-	100	75.568	ENSATEG00000002981	sfpq	53	75.000	Anabas_testudineus
ENSCLAG00000009583	-	100	75.424	ENSANAG00000021268	-	100	74.359	Aotus_nancymaae
ENSCLAG00000009583	-	99	76.000	ENSANAG00000037798	-	99	76.000	Aotus_nancymaae
ENSCLAG00000009583	-	100	88.034	ENSANAG00000027438	-	57	88.034	Aotus_nancymaae
ENSCLAG00000009583	-	100	71.307	ENSACLG00000022332	sfpq	50	71.591	Astatotilapia_calliptera
ENSCLAG00000009583	-	100	69.034	ENSAMXG00000011538	sfpq	52	71.307	Astyanax_mexicanus
ENSCLAG00000009583	-	100	100.000	ENSBTAG00000016328	SFPQ	50	100.000	Bos_taurus
ENSCLAG00000009583	-	100	100.000	ENSCJAG00000001431	SFPQ	50	100.000	Callithrix_jacchus
ENSCLAG00000009583	-	100	100.000	ENSCAFG00000003595	-	53	100.000	Canis_familiaris
ENSCLAG00000009583	-	100	93.162	ENSCAFG00000018271	-	53	93.162	Canis_familiaris
ENSCLAG00000009583	-	100	93.732	ENSCAFG00000017608	-	52	94.017	Canis_familiaris
ENSCLAG00000009583	-	100	93.162	ENSCAFG00020004881	-	53	93.162	Canis_lupus_dingo
ENSCLAG00000009583	-	100	90.883	ENSCAFG00020010702	-	100	90.883	Canis_lupus_dingo
ENSCLAG00000009583	-	100	100.000	ENSTSYG00000037120	-	100	100.000	Carlito_syrichta
ENSCLAG00000009583	-	99	85.673	ENSTSYG00000035106	-	98	85.673	Carlito_syrichta
ENSCLAG00000009583	-	100	91.168	ENSCPOG00000015018	-	100	89.256	Cavia_porcellus
ENSCLAG00000009583	-	100	100.000	ENSCCAG00000029361	-	50	100.000	Cebus_capucinus
ENSCLAG00000009583	-	100	100.000	ENSCSAG00000001082	SFPQ	50	100.000	Chlorocebus_sabaeus
ENSCLAG00000009583	-	100	94.872	ENSCHOG00000009131	SFPQ	92	94.872	Choloepus_hoffmanni
ENSCLAG00000009583	-	100	93.239	ENSCPBG00000018674	SFPQ	55	92.958	Chrysemys_picta_bellii
ENSCLAG00000009583	-	100	100.000	ENSCANG00000028087	-	100	100.000	Colobus_angolensis_palliatus
ENSCLAG00000009583	-	100	99.430	ENSCGRG00001011698	Sfpq	50	99.430	Cricetulus_griseus_chok1gshd
ENSCLAG00000009583	-	100	99.430	ENSCGRG00000010128	Sfpq	78	99.430	Cricetulus_griseus_crigri
ENSCLAG00000009583	-	100	72.727	ENSCSEG00000007852	sfpq	53	70.940	Cynoglossus_semilaevis
ENSCLAG00000009583	-	100	68.182	ENSCVAG00000019538	sfpq	52	64.387	Cyprinodon_variegatus
ENSCLAG00000009583	-	100	69.886	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSCLAG00000009583	-	100	100.000	ENSDNOG00000049454	SFPQ	50	100.000	Dasypus_novemcinctus
ENSCLAG00000009583	-	100	100.000	ENSDORG00000008109	Sfpq	50	100.000	Dipodomys_ordii
ENSCLAG00000009583	-	100	91.168	ENSETEG00000001095	SFPQ	50	91.168	Echinops_telfairi
ENSCLAG00000009583	-	100	100.000	ENSEASG00005012012	SFPQ	50	100.000	Equus_asinus_asinus
ENSCLAG00000009583	-	100	100.000	ENSECAG00000000642	SFPQ	50	100.000	Equus_caballus
ENSCLAG00000009583	-	100	70.538	ENSELUG00000023145	sfpq	53	68.750	Esox_lucius
ENSCLAG00000009583	-	100	100.000	ENSFCAG00000042862	SFPQ	50	100.000	Felis_catus
ENSCLAG00000009583	-	100	94.587	ENSFALG00000000731	SFPQ	100	94.587	Ficedula_albicollis
ENSCLAG00000009583	-	100	90.598	ENSFDAG00000017723	-	100	90.935	Fukomys_damarensis
ENSCLAG00000009583	-	100	71.875	ENSGMOG00000011957	sfpq	53	71.875	Gadus_morhua
ENSCLAG00000009583	-	100	73.654	ENSGMOG00000011950	SFPQ	60	73.088	Gadus_morhua
ENSCLAG00000009583	-	100	94.587	ENSGALG00000002514	SFPQ	54	94.587	Gallus_gallus
ENSCLAG00000009583	-	100	72.934	ENSGACG00000002034	sfpq	55	72.934	Gasterosteus_aculeatus
ENSCLAG00000009583	-	100	100.000	ENSGGOG00000026354	SFPQ	100	100.000	Gorilla_gorilla
ENSCLAG00000009583	-	100	71.307	ENSHBUG00000016818	sfpq	50	71.591	Haplochromis_burtoni
ENSCLAG00000009583	-	100	99.153	ENSHGLG00000012001	SFPQ	51	99.153	Heterocephalus_glaber_female
ENSCLAG00000009583	-	100	100.000	ENSHGLG00100004136	-	100	100.000	Heterocephalus_glaber_male
ENSCLAG00000009583	-	100	73.164	ENSHCOG00000008612	sfpq	55	66.097	Hippocampus_comes
ENSCLAG00000009583	-	100	70.170	ENSIPUG00000013076	SFPQ	50	80.866	Ictalurus_punctatus
ENSCLAG00000009583	-	100	100.000	ENSSTOG00000014004	-	100	100.000	Ictidomys_tridecemlineatus
ENSCLAG00000009583	-	100	99.715	ENSJJAG00000015633	Sfpq	50	99.715	Jaculus_jaculus
ENSCLAG00000009583	-	100	74.157	ENSLACG00000014728	SFPQ	57	78.754	Latimeria_chalumnae
ENSCLAG00000009583	-	100	79.261	ENSLOCG00000001067	sfpq	54	81.494	Lepisosteus_oculatus
ENSCLAG00000009583	-	100	99.715	ENSLAFG00000015951	SFPQ	56	99.715	Loxodonta_africana
ENSCLAG00000009583	-	100	100.000	ENSMFAG00000000797	SFPQ	50	100.000	Macaca_fascicularis
ENSCLAG00000009583	-	100	100.000	ENSMMUG00000019154	SFPQ	50	100.000	Macaca_mulatta
ENSCLAG00000009583	-	100	100.000	ENSMNEG00000038895	SFPQ	50	100.000	Macaca_nemestrina
ENSCLAG00000009583	-	93	93.252	ENSMLEG00000035352	-	99	93.252	Mandrillus_leucophaeus
ENSCLAG00000009583	-	100	96.866	ENSMLEG00000010643	-	100	96.866	Mandrillus_leucophaeus
ENSCLAG00000009583	-	100	75.852	ENSMAMG00000007875	sfpq	53	75.568	Mastacembelus_armatus
ENSCLAG00000009583	-	100	71.023	ENSMZEG00005026091	sfpq	50	71.591	Maylandia_zebra
ENSCLAG00000009583	-	100	88.981	ENSMGAG00000004237	SFPQ	93	90.331	Meleagris_gallopavo
ENSCLAG00000009583	-	100	99.145	ENSMAUG00000006402	Sfpq	50	99.145	Mesocricetus_auratus
ENSCLAG00000009583	-	100	100.000	ENSMICG00000027265	SFPQ	50	100.000	Microcebus_murinus
ENSCLAG00000009583	-	100	94.587	ENSMOCG00000019075	Sfpq	72	94.587	Microtus_ochrogaster
ENSCLAG00000009583	-	100	72.080	ENSMMOG00000001074	sfpq	53	71.510	Mola_mola
ENSCLAG00000009583	-	100	96.296	ENSMODG00000017937	SFPQ	52	96.296	Monodelphis_domestica
ENSCLAG00000009583	-	100	72.934	ENSMALG00000010381	sfpq	52	71.795	Monopterus_albus
ENSCLAG00000009583	-	100	99.430	MGP_CAROLIEiJ_G0026487	Sfpq	50	99.430	Mus_caroli
ENSCLAG00000009583	-	100	99.430	ENSMUSG00000028820	Sfpq	50	99.430	Mus_musculus
ENSCLAG00000009583	-	100	99.430	MGP_PahariEiJ_G0028818	Sfpq	50	99.430	Mus_pahari
ENSCLAG00000009583	-	100	99.430	MGP_SPRETEiJ_G0027466	Sfpq	50	99.430	Mus_spretus
ENSCLAG00000009583	-	87	99.673	ENSMPUG00000014931	-	98	99.673	Mustela_putorius_furo
ENSCLAG00000009583	-	100	99.430	ENSMLUG00000027090	SFPQ	79	99.430	Myotis_lucifugus
ENSCLAG00000009583	-	100	99.715	ENSNGAG00000000888	Sfpq	50	99.715	Nannospalax_galili
ENSCLAG00000009583	-	100	71.591	ENSNBRG00000017479	sfpq	50	71.875	Neolamprologus_brichardi
ENSCLAG00000009583	-	100	100.000	ENSNLEG00000035521	-	100	100.000	Nomascus_leucogenys
ENSCLAG00000009583	-	100	95.726	ENSMEUG00000014082	SFPQ	50	95.726	Notamacropus_eugenii
ENSCLAG00000009583	-	100	100.000	ENSOPRG00000013696	SFPQ	50	100.000	Ochotona_princeps
ENSCLAG00000009583	-	96	83.383	ENSODEG00000005485	SFPQ	59	82.493	Octodon_degus
ENSCLAG00000009583	-	100	72.159	ENSONIG00000017737	sfpq	50	72.443	Oreochromis_niloticus
ENSCLAG00000009583	-	100	97.436	ENSOANG00000008789	-	100	97.436	Ornithorhynchus_anatinus
ENSCLAG00000009583	-	100	100.000	ENSOCUG00000001877	SFPQ	69	100.000	Oryctolagus_cuniculus
ENSCLAG00000009583	-	100	99.715	ENSOGAG00000027710	SFPQ	66	99.715	Otolemur_garnettii
ENSCLAG00000009583	-	100	100.000	ENSOARG00000019439	SFPQ	54	100.000	Ovis_aries
ENSCLAG00000009583	-	100	100.000	ENSPPAG00000030078	SFPQ	50	100.000	Pan_paniscus
ENSCLAG00000009583	-	100	99.716	ENSPPRG00000015478	-	100	99.716	Panthera_pardus
ENSCLAG00000009583	-	100	100.000	ENSPTIG00000007710	-	100	100.000	Panthera_tigris_altaica
ENSCLAG00000009583	-	100	100.000	ENSPANG00000005380	SFPQ	52	100.000	Papio_anubis
ENSCLAG00000009583	-	100	75.000	ENSPKIG00000023035	sfpq	59	78.028	Paramormyrops_kingsleyae
ENSCLAG00000009583	-	100	94.302	ENSPSIG00000011494	SFPQ	81	94.302	Pelodiscus_sinensis
ENSCLAG00000009583	-	100	99.430	ENSPEMG00000009794	Sfpq	72	99.430	Peromyscus_maniculatus_bairdii
ENSCLAG00000009583	-	69	75.104	ENSPMAG00000005583	sfpq	51	75.104	Petromyzon_marinus
ENSCLAG00000009583	-	100	96.011	ENSPCIG00000000923	SFPQ	50	96.011	Phascolarctos_cinereus
ENSCLAG00000009583	-	100	65.156	ENSPFOG00000003127	sfpq	57	65.819	Poecilia_formosa
ENSCLAG00000009583	-	100	100.000	ENSPPYG00000001560	SFPQ	50	100.000	Pongo_abelii
ENSCLAG00000009583	-	100	100.000	ENSPCOG00000027127	SFPQ	50	100.000	Propithecus_coquereli
ENSCLAG00000009583	-	100	98.006	ENSPVAG00000001865	SFPQ	50	98.006	Pteropus_vampyrus
ENSCLAG00000009583	-	100	69.774	ENSPNAG00000002128	sfpq	57	72.034	Pygocentrus_nattereri
ENSCLAG00000009583	-	100	99.430	ENSRNOG00000058461	Sfpq	50	99.430	Rattus_norvegicus
ENSCLAG00000009583	-	100	100.000	ENSRBIG00000035286	SFPQ	100	100.000	Rhinopithecus_bieti
ENSCLAG00000009583	-	100	100.000	ENSRROG00000040992	SFPQ	100	100.000	Rhinopithecus_roxellana
ENSCLAG00000009583	-	100	100.000	ENSSBOG00000024972	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCLAG00000009583	-	97	73.977	ENSSBOG00000033925	-	99	73.099	Saimiri_boliviensis_boliviensis
ENSCLAG00000009583	-	100	89.702	ENSSHAG00000016107	-	79	88.889	Sarcophilus_harrisii
ENSCLAG00000009583	-	100	91.453	ENSSHAG00000012312	-	100	90.883	Sarcophilus_harrisii
ENSCLAG00000009583	-	100	75.284	ENSSFOG00015009289	sfpq	63	78.125	Scleropages_formosus
ENSCLAG00000009583	-	100	75.214	ENSSMAG00000018201	sfpq	52	72.113	Scophthalmus_maximus
ENSCLAG00000009583	-	100	74.359	ENSSDUG00000008402	sfpq	52	76.705	Seriola_dumerili
ENSCLAG00000009583	-	100	74.359	ENSSLDG00000018917	sfpq	52	76.705	Seriola_lalandi_dorsalis
ENSCLAG00000009583	-	100	100.000	ENSSARG00000006409	SFPQ	95	100.000	Sorex_araneus
ENSCLAG00000009583	-	100	73.295	ENSSPAG00000016550	sfpq	50	74.148	Stegastes_partitus
ENSCLAG00000009583	-	100	100.000	ENSSSCG00000035690	SFPQ	50	100.000	Sus_scrofa
ENSCLAG00000009583	-	100	94.587	ENSTGUG00000001722	SFPQ	81	94.587	Taeniopygia_guttata
ENSCLAG00000009583	-	100	74.074	ENSTRUG00000003783	sfpq	50	74.929	Takifugu_rubripes
ENSCLAG00000009583	-	100	75.284	ENSTNIG00000011331	sfpq	57	74.716	Tetraodon_nigroviridis
ENSCLAG00000009583	-	100	95.157	ENSTTRG00000013930	SFPQ	50	95.157	Tursiops_truncatus
ENSCLAG00000009583	-	63	99.160	ENSUAMG00000026758	SFPQ	53	99.160	Ursus_americanus
ENSCLAG00000009583	-	100	97.151	ENSUMAG00000008056	-	100	97.151	Ursus_maritimus
ENSCLAG00000009583	-	100	88.889	ENSVVUG00000000874	-	100	88.889	Vulpes_vulpes
ENSCLAG00000009583	-	100	82.633	ENSXETG00000009682	sfpq	95	85.294	Xenopus_tropicalis