EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000009796 (Gene tree)
Gene ID: 102017096
Gene Symbol: SYNJ1
Alias: INPP5G|PARK20
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 82317 bases
Position: chrJH721867.1:32093479-32175795
Accession: 102017096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000014191	Exo_endo_phos	PF03372.23	4.4e-15	1	1
ENSCLAP00000014193	Exo_endo_phos	PF03372.23	5.7e-15	1	1
ENSCLAP00000014192	Exo_endo_phos	PF03372.23	5.8e-15	1	1
ENSCLAP00000014190	Exo_endo_phos	PF03372.23	1.2e-07	1	1
ENSCLAP00000014191	DUF1866	PF08952.11	2.2e-58	1	1
ENSCLAP00000014192	DUF1866	PF08952.11	2.3e-58	1	1
ENSCLAP00000014193	DUF1866	PF08952.11	2.3e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000014351	SYNJ1-204	4821	-	ENSCLAP00000014193	1606 (aa)	-	-
ENSCLAT00000014350	SYNJ1-203	7640	XM_013504161	ENSCLAP00000014192	1601 (aa)	XP_013359615	-
ENSCLAT00000014348	SYNJ1-201	7510	-	ENSCLAP00000014190	693 (aa)	-	-
ENSCLAT00000014349	SYNJ1-202	7664	XM_013504196	ENSCLAP00000014191	1343 (aa)	XP_013359650	-

Gene Model

Click here to download ENSCLAG00000009796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000009796's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000009796	SYNJ1	100	58.190	ENSCLAG00000004730	SYNJ2	90	59.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000009796	SYNJ1	100	98.413	ENSG00000159082	SYNJ1	99	98.413	Homo_sapiens
ENSCLAG00000009796	SYNJ1	100	83.453	ENSAPOG00000002809	synj1	95	70.190	Acanthochromis_polyacanthus
ENSCLAG00000009796	SYNJ1	100	96.862	ENSAMEG00000015028	SYNJ1	100	90.341	Ailuropoda_melanoleuca
ENSCLAG00000009796	SYNJ1	100	79.281	ENSACIG00000008857	synj1	97	67.791	Amphilophus_citrinellus
ENSCLAG00000009796	SYNJ1	100	82.878	ENSAOCG00000009835	synj1	96	67.125	Amphiprion_ocellaris
ENSCLAG00000009796	SYNJ1	100	82.878	ENSAPEG00000021010	synj1	92	61.783	Amphiprion_percula
ENSCLAG00000009796	SYNJ1	100	82.446	ENSATEG00000002306	synj1	95	59.419	Anabas_testudineus
ENSCLAG00000009796	SYNJ1	100	91.619	ENSAPLG00000011832	SYNJ1	100	77.624	Anas_platyrhynchos
ENSCLAG00000009796	SYNJ1	100	90.585	ENSACAG00000003006	-	100	83.878	Anolis_carolinensis
ENSCLAG00000009796	SYNJ1	100	98.268	ENSANAG00000027325	SYNJ1	100	94.055	Aotus_nancymaae
ENSCLAG00000009796	SYNJ1	100	82.158	ENSACLG00000002255	synj1	96	67.519	Astatotilapia_calliptera
ENSCLAG00000009796	SYNJ1	100	82.902	ENSAMXG00000008208	synj1	95	60.138	Astyanax_mexicanus
ENSCLAG00000009796	SYNJ1	100	97.547	ENSBTAG00000003063	SYNJ1	100	93.101	Bos_taurus
ENSCLAG00000009796	SYNJ1	100	98.413	ENSCJAG00000009187	SYNJ1	100	93.983	Callithrix_jacchus
ENSCLAG00000009796	SYNJ1	100	97.980	ENSCAFG00000009041	SYNJ1	100	89.911	Canis_familiaris
ENSCLAG00000009796	SYNJ1	100	98.268	ENSCAFG00020025776	SYNJ1	98	88.789	Canis_lupus_dingo
ENSCLAG00000009796	SYNJ1	100	97.547	ENSCHIG00000005095	SYNJ1	100	86.552	Capra_hircus
ENSCLAG00000009796	SYNJ1	100	97.835	ENSTSYG00000014541	SYNJ1	100	93.364	Carlito_syrichta
ENSCLAG00000009796	SYNJ1	89	88.836	ENSCAPG00000014483	SYNJ1	99	81.271	Cavia_aperea
ENSCLAG00000009796	SYNJ1	100	98.990	ENSCPOG00000012182	SYNJ1	100	96.339	Cavia_porcellus
ENSCLAG00000009796	SYNJ1	100	98.124	ENSCCAG00000020825	SYNJ1	100	93.826	Cebus_capucinus
ENSCLAG00000009796	SYNJ1	100	98.557	ENSCATG00000033891	SYNJ1	100	94.279	Cercocebus_atys
ENSCLAG00000009796	SYNJ1	100	97.004	ENSCSAG00000009654	SYNJ1	100	95.500	Chlorocebus_sabaeus
ENSCLAG00000009796	SYNJ1	83	100.000	ENSCHOG00000012390	SYNJ1	87	91.531	Choloepus_hoffmanni
ENSCLAG00000009796	SYNJ1	100	93.362	ENSCPBG00000006402	SYNJ1	100	86.239	Chrysemys_picta_bellii
ENSCLAG00000009796	SYNJ1	100	98.557	ENSCANG00000031359	SYNJ1	100	94.279	Colobus_angolensis_palliatus
ENSCLAG00000009796	SYNJ1	100	96.681	ENSCGRG00001010861	Synj1	100	93.745	Cricetulus_griseus_chok1gshd
ENSCLAG00000009796	SYNJ1	100	96.681	ENSCGRG00000015749	Synj1	100	96.681	Cricetulus_griseus_crigri
ENSCLAG00000009796	SYNJ1	100	81.366	ENSCSEG00000019614	synj1	91	71.839	Cynoglossus_semilaevis
ENSCLAG00000009796	SYNJ1	100	77.778	ENSCVAG00000019250	synj1	93	67.376	Cyprinodon_variegatus
ENSCLAG00000009796	SYNJ1	100	81.935	ENSDARG00000025011	synj1	96	70.062	Danio_rerio
ENSCLAG00000009796	SYNJ1	100	89.943	ENSDNOG00000010732	SYNJ1	99	85.355	Dasypus_novemcinctus
ENSCLAG00000009796	SYNJ1	100	98.268	ENSDORG00000014735	-	100	98.268	Dipodomys_ordii
ENSCLAG00000009796	SYNJ1	83	95.652	ENSETEG00000018674	SYNJ1	78	95.652	Echinops_telfairi
ENSCLAG00000009796	SYNJ1	100	97.980	ENSEASG00005006287	SYNJ1	98	93.867	Equus_asinus_asinus
ENSCLAG00000009796	SYNJ1	100	97.835	ENSECAG00000004829	SYNJ1	100	90.133	Equus_caballus
ENSCLAG00000009796	SYNJ1	83	100.000	ENSEEUG00000005150	SYNJ1	95	89.118	Erinaceus_europaeus
ENSCLAG00000009796	SYNJ1	100	81.727	ENSELUG00000009731	synj1	96	58.741	Esox_lucius
ENSCLAG00000009796	SYNJ1	100	98.124	ENSFCAG00000012498	SYNJ1	100	92.846	Felis_catus
ENSCLAG00000009796	SYNJ1	73	77.835	ENSFALG00000004680	SYNJ1	100	68.830	Ficedula_albicollis
ENSCLAG00000009796	SYNJ1	100	98.701	ENSFDAG00000016818	SYNJ1	100	98.701	Fukomys_damarensis
ENSCLAG00000009796	SYNJ1	100	81.366	ENSFHEG00000017689	synj1	97	58.733	Fundulus_heteroclitus
ENSCLAG00000009796	SYNJ1	93	79.116	ENSGMOG00000014852	synj1	77	72.424	Gadus_morhua
ENSCLAG00000009796	SYNJ1	100	92.929	ENSGALG00000034317	SYNJ1	100	74.123	Gallus_gallus
ENSCLAG00000009796	SYNJ1	100	82.302	ENSGAFG00000019466	synj1	89	62.382	Gambusia_affinis
ENSCLAG00000009796	SYNJ1	98	76.012	ENSGACG00000020575	synj1	94	63.146	Gasterosteus_aculeatus
ENSCLAG00000009796	SYNJ1	100	93.506	ENSGAGG00000022523	SYNJ1	100	84.459	Gopherus_agassizii
ENSCLAG00000009796	SYNJ1	100	98.413	ENSGGOG00000015945	SYNJ1	100	94.050	Gorilla_gorilla
ENSCLAG00000009796	SYNJ1	100	80.939	ENSHBUG00000007774	synj1	96	67.519	Haplochromis_burtoni
ENSCLAG00000009796	SYNJ1	100	98.413	ENSHGLG00000006420	SYNJ1	100	98.413	Heterocephalus_glaber_female
ENSCLAG00000009796	SYNJ1	100	98.413	ENSHGLG00100012591	SYNJ1	100	98.413	Heterocephalus_glaber_male
ENSCLAG00000009796	SYNJ1	100	77.266	ENSHCOG00000012774	synj1	85	72.928	Hippocampus_comes
ENSCLAG00000009796	SYNJ1	100	82.590	ENSIPUG00000010691	SYNJ1	95	61.736	Ictalurus_punctatus
ENSCLAG00000009796	SYNJ1	100	98.268	ENSSTOG00000015806	SYNJ1	100	96.491	Ictidomys_tridecemlineatus
ENSCLAG00000009796	SYNJ1	100	86.869	ENSJJAG00000020168	Synj1	100	86.104	Jaculus_jaculus
ENSCLAG00000009796	SYNJ1	100	82.158	ENSKMAG00000004221	synj1	93	71.982	Kryptolebias_marmoratus
ENSCLAG00000009796	SYNJ1	100	81.241	ENSLBEG00000015081	synj1	96	61.058	Labrus_bergylta
ENSCLAG00000009796	SYNJ1	100	86.827	ENSLACG00000005928	SYNJ1	97	70.188	Latimeria_chalumnae
ENSCLAG00000009796	SYNJ1	100	84.211	ENSLOCG00000009230	synj1	100	70.402	Lepisosteus_oculatus
ENSCLAG00000009796	SYNJ1	100	96.006	ENSLAFG00000011806	SYNJ1	99	88.053	Loxodonta_africana
ENSCLAG00000009796	SYNJ1	94	98.315	ENSMFAG00000018883	SYNJ1	99	95.279	Macaca_fascicularis
ENSCLAG00000009796	SYNJ1	100	97.290	ENSMMUG00000004624	SYNJ1	100	95.205	Macaca_mulatta
ENSCLAG00000009796	SYNJ1	100	98.557	ENSMNEG00000040077	SYNJ1	96	94.974	Macaca_nemestrina
ENSCLAG00000009796	SYNJ1	100	98.557	ENSMLEG00000037029	SYNJ1	100	94.279	Mandrillus_leucophaeus
ENSCLAG00000009796	SYNJ1	100	82.734	ENSMAMG00000013404	synj1	99	58.625	Mastacembelus_armatus
ENSCLAG00000009796	SYNJ1	100	82.158	ENSMZEG00005024358	synj1	96	67.393	Maylandia_zebra
ENSCLAG00000009796	SYNJ1	100	89.533	ENSMGAG00000014522	SYNJ1	100	77.024	Meleagris_gallopavo
ENSCLAG00000009796	SYNJ1	100	96.392	ENSMAUG00000009743	Synj1	100	96.392	Mesocricetus_auratus
ENSCLAG00000009796	SYNJ1	100	98.268	ENSMICG00000034953	SYNJ1	100	93.669	Microcebus_murinus
ENSCLAG00000009796	SYNJ1	100	81.277	ENSMMOG00000010203	synj1	98	69.420	Mola_mola
ENSCLAG00000009796	SYNJ1	100	86.305	ENSMODG00000021073	SYNJ1	100	80.319	Monodelphis_domestica
ENSCLAG00000009796	SYNJ1	100	82.590	ENSMALG00000014015	synj1	92	61.270	Monopterus_albus
ENSCLAG00000009796	SYNJ1	100	97.403	MGP_CAROLIEiJ_G0020951	Synj1	100	97.403	Mus_caroli
ENSCLAG00000009796	SYNJ1	100	97.835	ENSMUSG00000022973	Synj1	100	97.835	Mus_musculus
ENSCLAG00000009796	SYNJ1	100	97.547	MGP_PahariEiJ_G0016656	Synj1	100	97.547	Mus_pahari
ENSCLAG00000009796	SYNJ1	100	97.547	MGP_SPRETEiJ_G0021857	Synj1	100	97.547	Mus_spretus
ENSCLAG00000009796	SYNJ1	100	96.879	ENSMPUG00000001153	SYNJ1	100	89.899	Mustela_putorius_furo
ENSCLAG00000009796	SYNJ1	60	84.211	ENSMLUG00000005764	-	100	74.608	Myotis_lucifugus
ENSCLAG00000009796	SYNJ1	94	94.793	ENSMLUG00000026584	-	100	94.815	Myotis_lucifugus
ENSCLAG00000009796	SYNJ1	100	97.691	ENSNGAG00000000453	Synj1	100	97.691	Nannospalax_galili
ENSCLAG00000009796	SYNJ1	100	82.302	ENSNBRG00000011936	synj1	98	59.949	Neolamprologus_brichardi
ENSCLAG00000009796	SYNJ1	86	91.143	ENSNLEG00000003734	SYNJ1	100	89.333	Nomascus_leucogenys
ENSCLAG00000009796	SYNJ1	89	79.614	ENSMEUG00000004158	-	73	76.630	Notamacropus_eugenii
ENSCLAG00000009796	SYNJ1	100	91.013	ENSOPRG00000013602	SYNJ1	93	93.415	Ochotona_princeps
ENSCLAG00000009796	SYNJ1	100	98.701	ENSODEG00000002409	-	100	98.701	Octodon_degus
ENSCLAG00000009796	SYNJ1	100	81.223	ENSONIG00000004667	synj1	100	66.046	Oreochromis_niloticus
ENSCLAG00000009796	SYNJ1	94	91.964	ENSOANG00000006929	SYNJ1	97	78.007	Ornithorhynchus_anatinus
ENSCLAG00000009796	SYNJ1	100	96.291	ENSOCUG00000001420	SYNJ1	100	86.772	Oryctolagus_cuniculus
ENSCLAG00000009796	SYNJ1	100	81.583	ENSORLG00000004320	synj1	95	67.607	Oryzias_latipes
ENSCLAG00000009796	SYNJ1	100	78.094	ENSORLG00020011994	synj1	93	69.482	Oryzias_latipes_hni
ENSCLAG00000009796	SYNJ1	100	81.727	ENSORLG00015018077	synj1	93	60.564	Oryzias_latipes_hsok
ENSCLAG00000009796	SYNJ1	100	82.014	ENSOMEG00000014322	synj1	96	68.344	Oryzias_melastigma
ENSCLAG00000009796	SYNJ1	100	89.266	ENSOGAG00000006010	SYNJ1	100	85.662	Otolemur_garnettii
ENSCLAG00000009796	SYNJ1	100	95.887	ENSOARG00000013414	SYNJ1	100	86.540	Ovis_aries
ENSCLAG00000009796	SYNJ1	100	98.413	ENSPPAG00000026784	SYNJ1	100	94.508	Pan_paniscus
ENSCLAG00000009796	SYNJ1	100	98.268	ENSPPRG00000023469	SYNJ1	100	92.922	Panthera_pardus
ENSCLAG00000009796	SYNJ1	100	98.124	ENSPTIG00000007930	SYNJ1	100	92.846	Panthera_tigris_altaica
ENSCLAG00000009796	SYNJ1	100	98.413	ENSPTRG00000048135	-	100	90.487	Pan_troglodytes
ENSCLAG00000009796	SYNJ1	100	98.413	ENSPTRG00000023787	SYNJ1	100	94.508	Pan_troglodytes
ENSCLAG00000009796	SYNJ1	100	98.557	ENSPANG00000022531	SYNJ1	100	95.500	Papio_anubis
ENSCLAG00000009796	SYNJ1	100	84.029	ENSPKIG00000022603	synj1	95	75.705	Paramormyrops_kingsleyae
ENSCLAG00000009796	SYNJ1	100	82.158	ENSPMGG00000016831	synj1	91	65.921	Periophthalmus_magnuspinnatus
ENSCLAG00000009796	SYNJ1	100	96.825	ENSPEMG00000018767	Synj1	100	96.825	Peromyscus_maniculatus_bairdii
ENSCLAG00000009796	SYNJ1	100	64.124	ENSPMAG00000002887	synj1	97	53.030	Petromyzon_marinus
ENSCLAG00000009796	SYNJ1	100	93.362	ENSPCIG00000016372	SYNJ1	100	86.136	Phascolarctos_cinereus
ENSCLAG00000009796	SYNJ1	100	81.250	ENSPFOG00000016886	synj1	98	64.448	Poecilia_formosa
ENSCLAG00000009796	SYNJ1	100	82.158	ENSPLAG00000017559	synj1	98	64.286	Poecilia_latipinna
ENSCLAG00000009796	SYNJ1	100	81.871	ENSPMEG00000007643	synj1	89	62.222	Poecilia_mexicana
ENSCLAG00000009796	SYNJ1	100	82.302	ENSPREG00000012412	synj1	97	66.742	Poecilia_reticulata
ENSCLAG00000009796	SYNJ1	100	97.004	ENSPPYG00000011365	SYNJ1	98	93.959	Pongo_abelii
ENSCLAG00000009796	SYNJ1	85	92.857	ENSPCAG00000009906	SYNJ1	84	92.857	Procavia_capensis
ENSCLAG00000009796	SYNJ1	85	100.000	ENSPCOG00000024841	SYNJ1	99	90.068	Propithecus_coquereli
ENSCLAG00000009796	SYNJ1	100	96.576	ENSPVAG00000000892	SYNJ1	100	86.303	Pteropus_vampyrus
ENSCLAG00000009796	SYNJ1	100	82.158	ENSPNYG00000022989	synj1	97	65.896	Pundamilia_nyererei
ENSCLAG00000009796	SYNJ1	100	82.590	ENSPNAG00000021119	synj1	91	76.673	Pygocentrus_nattereri
ENSCLAG00000009796	SYNJ1	100	96.434	ENSRNOG00000002051	Synj1	100	93.988	Rattus_norvegicus
ENSCLAG00000009796	SYNJ1	100	98.413	ENSRBIG00000034477	SYNJ1	100	94.127	Rhinopithecus_bieti
ENSCLAG00000009796	SYNJ1	100	97.147	ENSRROG00000039256	SYNJ1	100	94.279	Rhinopithecus_roxellana
ENSCLAG00000009796	SYNJ1	100	98.557	ENSSBOG00000021001	SYNJ1	100	93.979	Saimiri_boliviensis_boliviensis
ENSCLAG00000009796	SYNJ1	100	92.352	ENSSHAG00000008538	SYNJ1	97	78.188	Sarcophilus_harrisii
ENSCLAG00000009796	SYNJ1	100	83.165	ENSSFOG00015006095	synj1	95	61.776	Scleropages_formosus
ENSCLAG00000009796	SYNJ1	100	82.158	ENSSMAG00000018066	synj1	94	66.193	Scophthalmus_maximus
ENSCLAG00000009796	SYNJ1	100	82.878	ENSSDUG00000013058	synj1	91	61.026	Seriola_dumerili
ENSCLAG00000009796	SYNJ1	100	82.590	ENSSLDG00000021406	synj1	96	67.844	Seriola_lalandi_dorsalis
ENSCLAG00000009796	SYNJ1	76	95.514	ENSSARG00000009490	SYNJ1	73	97.368	Sorex_araneus
ENSCLAG00000009796	SYNJ1	100	93.506	ENSSPUG00000012552	SYNJ1	100	73.476	Sphenodon_punctatus
ENSCLAG00000009796	SYNJ1	100	82.878	ENSSPAG00000017029	synj1	96	66.170	Stegastes_partitus
ENSCLAG00000009796	SYNJ1	89	82.637	ENSSPAG00000006812	SYNJ1	96	57.707	Stegastes_partitus
ENSCLAG00000009796	SYNJ1	100	98.557	ENSSSCG00000012035	SYNJ1	100	93.328	Sus_scrofa
ENSCLAG00000009796	SYNJ1	100	91.218	ENSTGUG00000013445	SYNJ1	100	76.038	Taeniopygia_guttata
ENSCLAG00000009796	SYNJ1	100	82.014	ENSTRUG00000006907	synj1	96	68.065	Takifugu_rubripes
ENSCLAG00000009796	SYNJ1	100	76.858	ENSTNIG00000009940	synj1	100	64.971	Tetraodon_nigroviridis
ENSCLAG00000009796	SYNJ1	92	98.930	ENSTBEG00000016298	SYNJ1	92	87.352	Tupaia_belangeri
ENSCLAG00000009796	SYNJ1	100	90.014	ENSTTRG00000002222	SYNJ1	100	79.217	Tursiops_truncatus
ENSCLAG00000009796	SYNJ1	100	98.413	ENSUAMG00000018606	SYNJ1	99	96.362	Ursus_americanus
ENSCLAG00000009796	SYNJ1	100	98.413	ENSUMAG00000018419	SYNJ1	99	96.362	Ursus_maritimus
ENSCLAG00000009796	SYNJ1	87	97.227	ENSVPAG00000001241	SYNJ1	87	97.653	Vicugna_pacos
ENSCLAG00000009796	SYNJ1	100	98.413	ENSVVUG00000023125	SYNJ1	100	94.889	Vulpes_vulpes
ENSCLAG00000009796	SYNJ1	100	84.986	ENSXETG00000009899	synj1	98	69.912	Xenopus_tropicalis
ENSCLAG00000009796	SYNJ1	100	81.081	ENSXCOG00000011896	synj1	96	70.101	Xiphophorus_couchianus
ENSCLAG00000009796	SYNJ1	100	80.939	ENSXMAG00000017524	synj1	98	66.249	Xiphophorus_maculatus