EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000010195 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 1311 bases
Position: chrJH721868.1:1444537-1445847
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000014780	zf-C2H2	PF00096.26	8.4e-65	1	11
ENSCLAP00000014780	zf-C2H2	PF00096.26	8.4e-65	2	11
ENSCLAP00000014780	zf-C2H2	PF00096.26	8.4e-65	3	11
ENSCLAP00000014780	zf-C2H2	PF00096.26	8.4e-65	4	11
ENSCLAP00000014780	zf-C2H2	PF00096.26	8.4e-65	5	11
ENSCLAP00000014780	zf-C2H2	PF00096.26	8.4e-65	6	11
ENSCLAP00000014780	zf-C2H2	PF00096.26	8.4e-65	7	11
ENSCLAP00000014780	zf-C2H2	PF00096.26	8.4e-65	8	11
ENSCLAP00000014780	zf-C2H2	PF00096.26	8.4e-65	9	11
ENSCLAP00000014780	zf-C2H2	PF00096.26	8.4e-65	10	11
ENSCLAP00000014780	zf-C2H2	PF00096.26	8.4e-65	11	11
ENSCLAP00000014780	zf-met	PF12874.7	0.00033	1	2
ENSCLAP00000014780	zf-met	PF12874.7	0.00033	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000014939	-	1248	-	ENSCLAP00000014780	415 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000010195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000010195's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000010195	-	83	33.220	ENSCLAG00000002951	ZNF526	86	34.000
ENSCLAG00000010195	-	75	39.785	ENSCLAG00000014824	-	82	39.785
ENSCLAG00000010195	-	92	54.598	ENSCLAG00000000250	ZNF550	61	54.598
ENSCLAG00000010195	-	87	40.227	ENSCLAG00000006953	ZNF319	91	40.227
ENSCLAG00000010195	-	86	51.636	ENSCLAG00000011533	ZNF768	51	51.373
ENSCLAG00000010195	-	87	36.559	ENSCLAG00000008329	ZFP64	62	39.855
ENSCLAG00000010195	-	91	53.819	ENSCLAG00000003483	ZNF112	82	53.819
ENSCLAG00000010195	-	90	53.043	ENSCLAG00000001537	ZNF81	72	53.043
ENSCLAG00000010195	-	90	51.757	ENSCLAG00000000758	-	68	51.506
ENSCLAG00000010195	-	84	41.818	ENSCLAG00000011797	SNAI2	56	41.818
ENSCLAG00000010195	-	84	48.696	ENSCLAG00000005392	PRDM5	81	48.696
ENSCLAG00000010195	-	88	36.905	ENSCLAG00000010565	ZNF521	97	30.093
ENSCLAG00000010195	-	84	35.955	ENSCLAG00000006252	ZNF574	93	35.967
ENSCLAG00000010195	-	93	39.583	ENSCLAG00000007342	ZNF423	97	37.037
ENSCLAG00000010195	-	85	36.634	ENSCLAG00000016426	OVOL1	51	36.634
ENSCLAG00000010195	-	85	40.171	ENSCLAG00000001598	ZNF784	74	41.026
ENSCLAG00000010195	-	96	42.697	ENSCLAG00000007793	ZNF236	77	38.365
ENSCLAG00000010195	-	99	52.140	ENSCLAG00000014648	-	77	54.890
ENSCLAG00000010195	-	98	55.859	ENSCLAG00000003116	ZNF2	66	56.371
ENSCLAG00000010195	-	73	39.506	ENSCLAG00000003912	GTF3A	82	39.506
ENSCLAG00000010195	-	90	52.521	ENSCLAG00000004223	ZFP1	88	52.521
ENSCLAG00000010195	-	77	47.059	ENSCLAG00000010479	SALL4	51	47.059
ENSCLAG00000010195	-	99	52.137	ENSCLAG00000012556	-	90	55.233
ENSCLAG00000010195	-	90	52.676	ENSCLAG00000003065	ZNF226	79	52.924
ENSCLAG00000010195	-	92	36.047	ENSCLAG00000011313	ZNF646	69	36.047
ENSCLAG00000010195	-	89	50.645	ENSCLAG00000001377	-	93	49.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000010195	-	99	89.563	ENSCAPG00000006920	-	100	88.592	Cavia_aperea
ENSCLAG00000010195	-	99	89.320	ENSCPOG00000035563	-	100	88.350	Cavia_porcellus
ENSCLAG00000010195	-	100	82.110	ENSCATG00000031926	ZNF454	83	81.881	Cercocebus_atys
ENSCLAG00000010195	-	100	82.311	ENSCGRG00001013939	Zfp454	79	82.311	Cricetulus_griseus_chok1gshd
ENSCLAG00000010195	-	100	82.311	ENSCGRG00000014813	Zfp454	79	82.311	Cricetulus_griseus_crigri
ENSCLAG00000010195	-	100	83.678	ENSEASG00005012616	ZNF454	90	83.218	Equus_asinus_asinus
ENSCLAG00000010195	-	99	79.540	ENSEEUG00000007684	ZNF454	69	91.573	Erinaceus_europaeus
ENSCLAG00000010195	-	100	82.798	ENSMFAG00000043337	ZNF454	83	82.569	Macaca_fascicularis
ENSCLAG00000010195	-	100	82.798	ENSMMUG00000045647	ZNF454	83	82.569	Macaca_mulatta
ENSCLAG00000010195	-	100	82.798	ENSMNEG00000002699	ZNF454	83	82.569	Macaca_nemestrina
ENSCLAG00000010195	-	100	82.339	ENSMLEG00000039955	ZNF454	83	82.110	Mandrillus_leucophaeus
ENSCLAG00000010195	-	100	80.615	ENSMUSG00000048728	Zfp454	99	80.615	Mus_musculus
ENSCLAG00000010195	-	100	81.881	ENSMLUG00000002894	ZNF454	84	81.651	Myotis_lucifugus
ENSCLAG00000010195	-	100	82.339	ENSPANG00000009509	ZNF454	83	82.110	Papio_anubis
ENSCLAG00000010195	-	100	81.651	ENSSSCG00000027351	ZNF454	83	81.422	Sus_scrofa
ENSCLAG00000010195	-	97	86.207	ENSUAMG00000026246	ZNF454	93	85.714	Ursus_americanus
ENSCLAG00000010195	-	99	82.751	ENSUMAG00000023930	ZNF454	86	82.284	Ursus_maritimus
ENSCLAG00000010195	-	100	85.476	ENSVVUG00000001267	ZNF454	70	84.689	Vulpes_vulpes