EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000010247 (Gene tree)
Gene ID: 102026583
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 7894 bases
Position: chrJH721905.1:13661209-13669102
Accession: 102026583
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000014860	RRM_1	PF00076.22	9.1e-33	1	2
ENSCLAP00000014860	RRM_1	PF00076.22	9.1e-33	2	2
ENSCLAP00000014861	RRM_1	PF00076.22	2.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000015020	SRSF6-202	408	-	ENSCLAP00000014861	135 (aa)	-	UPI000002B37D
ENSCLAT00000015019	SRSF6-201	6086	XM_005392500	ENSCLAP00000014860	343 (aa)	XP_005392557	UPI00034F35B2

Gene Model

Click here to download ENSCLAG00000010247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000010247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000010247	SRSF6	58	40.670	ENSCLAG00000014707	-	76	41.627
ENSCLAG00000010247	SRSF6	56	34.667	ENSCLAG00000014756	RBM4	52	34.667
ENSCLAG00000010247	SRSF6	66	57.709	ENSCLAG00000004755	SRSF5	67	64.130
ENSCLAG00000010247	SRSF6	56	48.101	ENSCLAG00000005235	SRSF7	58	48.101
ENSCLAG00000010247	SRSF6	51	47.297	ENSCLAG00000012289	SRSF9	71	41.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000010247	SRSF6	100	100.000	ENSG00000124193	SRSF6	100	100.000	Homo_sapiens
ENSCLAG00000010247	SRSF6	58	93.590	ENSAPOG00000016635	-	84	81.618	Acanthochromis_polyacanthus
ENSCLAG00000010247	SRSF6	94	84.923	ENSAMEG00000003710	SRSF6	94	84.923	Ailuropoda_melanoleuca
ENSCLAG00000010247	SRSF6	87	68.121	ENSACIG00000023658	-	56	87.778	Amphilophus_citrinellus
ENSCLAG00000010247	SRSF6	63	87.059	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSCLAG00000010247	SRSF6	92	67.939	ENSAOCG00000019438	-	98	67.939	Amphiprion_ocellaris
ENSCLAG00000010247	SRSF6	65	82.955	ENSAOCG00000004309	-	57	83.152	Amphiprion_ocellaris
ENSCLAG00000010247	SRSF6	98	61.871	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSCLAG00000010247	SRSF6	63	84.706	ENSAPEG00000020746	-	66	79.787	Amphiprion_percula
ENSCLAG00000010247	SRSF6	66	83.146	ENSATEG00000007255	-	83	70.404	Anabas_testudineus
ENSCLAG00000010247	SRSF6	94	81.595	ENSACAG00000002061	SRSF6	92	85.802	Anolis_carolinensis
ENSCLAG00000010247	SRSF6	100	100.000	ENSANAG00000024080	SRSF6	100	100.000	Aotus_nancymaae
ENSCLAG00000010247	SRSF6	54	89.041	ENSACLG00000024373	-	96	79.570	Astatotilapia_calliptera
ENSCLAG00000010247	SRSF6	55	91.892	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSCLAG00000010247	SRSF6	55	93.243	ENSAMXG00000003101	-	51	85.789	Astyanax_mexicanus
ENSCLAG00000010247	SRSF6	100	99.259	ENSBTAG00000008527	SRSF6	100	99.259	Bos_taurus
ENSCLAG00000010247	SRSF6	100	100.000	ENSCJAG00000048403	SRSF6	100	100.000	Callithrix_jacchus
ENSCLAG00000010247	SRSF6	100	99.259	ENSCAFG00000009289	SRSF6	100	99.259	Canis_familiaris
ENSCLAG00000010247	SRSF6	100	99.259	ENSCAFG00020013559	SRSF6	100	99.259	Canis_lupus_dingo
ENSCLAG00000010247	SRSF6	94	96.296	ENSCHIG00000009148	-	94	96.296	Capra_hircus
ENSCLAG00000010247	SRSF6	100	99.259	ENSCHIG00000015890	-	100	99.259	Capra_hircus
ENSCLAG00000010247	SRSF6	94	81.366	ENSTSYG00000026476	SRSF6	93	78.704	Carlito_syrichta
ENSCLAG00000010247	SRSF6	100	100.000	ENSCPOG00000011761	SRSF6	100	100.000	Cavia_porcellus
ENSCLAG00000010247	SRSF6	95	69.939	ENSCCAG00000018540	-	62	87.234	Cebus_capucinus
ENSCLAG00000010247	SRSF6	100	100.000	ENSCCAG00000026018	-	100	100.000	Cebus_capucinus
ENSCLAG00000010247	SRSF6	100	100.000	ENSCATG00000030794	SRSF6	100	100.000	Cercocebus_atys
ENSCLAG00000010247	SRSF6	100	97.681	ENSCSAG00000014022	SRSF6	100	97.681	Chlorocebus_sabaeus
ENSCLAG00000010247	SRSF6	100	82.609	ENSCHOG00000000561	SRSF6	100	82.609	Choloepus_hoffmanni
ENSCLAG00000010247	SRSF6	58	97.436	ENSCPBG00000018200	SRSF6	94	85.410	Chrysemys_picta_bellii
ENSCLAG00000010247	SRSF6	100	96.812	ENSCANG00000037774	-	100	96.812	Colobus_angolensis_palliatus
ENSCLAG00000010247	SRSF6	94	82.099	ENSCANG00000042529	-	93	79.321	Colobus_angolensis_palliatus
ENSCLAG00000010247	SRSF6	100	98.519	ENSCGRG00001022339	Srsf6	100	98.519	Cricetulus_griseus_chok1gshd
ENSCLAG00000010247	SRSF6	62	95.327	ENSCGRG00000006618	Srsf6	100	95.327	Cricetulus_griseus_crigri
ENSCLAG00000010247	SRSF6	58	93.590	ENSCSEG00000019778	SRSF6	90	84.252	Cynoglossus_semilaevis
ENSCLAG00000010247	SRSF6	58	92.308	ENSCVAG00000001863	SRSF6	95	85.039	Cyprinodon_variegatus
ENSCLAG00000010247	SRSF6	55	90.541	ENSDARG00000016783	srsf6b	87	89.157	Danio_rerio
ENSCLAG00000010247	SRSF6	94	96.296	ENSDNOG00000008410	SRSF6	94	96.296	Dasypus_novemcinctus
ENSCLAG00000010247	SRSF6	100	100.000	ENSDORG00000028378	Srsf6	100	100.000	Dipodomys_ordii
ENSCLAG00000010247	SRSF6	93	92.812	ENSETEG00000006221	SRSF6	94	90.432	Echinops_telfairi
ENSCLAG00000010247	SRSF6	94	95.679	ENSEASG00005023429	SRSF6	94	96.605	Equus_asinus_asinus
ENSCLAG00000010247	SRSF6	94	95.679	ENSECAG00000023932	SRSF6	94	96.605	Equus_caballus
ENSCLAG00000010247	SRSF6	57	93.333	ENSEEUG00000002324	SRSF6	90	93.401	Erinaceus_europaeus
ENSCLAG00000010247	SRSF6	98	59.286	ENSELUG00000024182	SRSF6	85	87.356	Esox_lucius
ENSCLAG00000010247	SRSF6	73	77.778	ENSELUG00000013506	SRSF6	88	77.778	Esox_lucius
ENSCLAG00000010247	SRSF6	94	96.605	ENSFCAG00000032814	SRSF6	94	96.605	Felis_catus
ENSCLAG00000010247	SRSF6	100	84.257	ENSFDAG00000012191	SRSF6	100	84.257	Fukomys_damarensis
ENSCLAG00000010247	SRSF6	88	70.724	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSCLAG00000010247	SRSF6	61	76.829	ENSGMOG00000006105	srsf6a	62	70.391	Gadus_morhua
ENSCLAG00000010247	SRSF6	56	90.789	ENSGMOG00000014458	srsf6a	52	78.646	Gadus_morhua
ENSCLAG00000010247	SRSF6	100	97.037	ENSGALG00000000990	SRSF6	100	97.037	Gallus_gallus
ENSCLAG00000010247	SRSF6	58	92.308	ENSGAFG00000019088	-	72	82.400	Gambusia_affinis
ENSCLAG00000010247	SRSF6	98	61.194	ENSGACG00000006084	srsf6a	53	83.871	Gasterosteus_aculeatus
ENSCLAG00000010247	SRSF6	58	97.436	ENSGAGG00000003238	SRSF6	94	85.410	Gopherus_agassizii
ENSCLAG00000010247	SRSF6	100	100.000	ENSGGOG00000009808	SRSF6	100	100.000	Gorilla_gorilla
ENSCLAG00000010247	SRSF6	88	79.538	ENSHGLG00000007701	-	58	79.679	Heterocephalus_glaber_female
ENSCLAG00000010247	SRSF6	100	100.000	ENSHGLG00000007348	SRSF6	100	100.000	Heterocephalus_glaber_female
ENSCLAG00000010247	SRSF6	100	85.131	ENSHGLG00100005043	SRSF6	100	85.131	Heterocephalus_glaber_male
ENSCLAG00000010247	SRSF6	58	89.744	ENSHCOG00000002740	srsf6a	57	83.152	Hippocampus_comes
ENSCLAG00000010247	SRSF6	58	92.308	ENSIPUG00000004776	-	72	76.233	Ictalurus_punctatus
ENSCLAG00000010247	SRSF6	100	100.000	ENSSTOG00000010866	SRSF6	100	100.000	Ictidomys_tridecemlineatus
ENSCLAG00000010247	SRSF6	56	93.264	ENSJJAG00000020690	Srsf6	91	92.308	Jaculus_jaculus
ENSCLAG00000010247	SRSF6	54	93.151	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSCLAG00000010247	SRSF6	58	92.308	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSCLAG00000010247	SRSF6	89	82.692	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSCLAG00000010247	SRSF6	70	94.142	ENSLAFG00000006682	SRSF6	89	94.323	Loxodonta_africana
ENSCLAG00000010247	SRSF6	100	100.000	ENSMFAG00000036925	SRSF6	100	100.000	Macaca_fascicularis
ENSCLAG00000010247	SRSF6	100	100.000	ENSMMUG00000006742	SRSF6	100	100.000	Macaca_mulatta
ENSCLAG00000010247	SRSF6	100	98.519	ENSMNEG00000027392	-	100	98.519	Macaca_nemestrina
ENSCLAG00000010247	SRSF6	94	96.894	ENSMNEG00000038270	-	94	96.914	Macaca_nemestrina
ENSCLAG00000010247	SRSF6	62	96.296	ENSMLEG00000031524	SRSF6	100	96.296	Mandrillus_leucophaeus
ENSCLAG00000010247	SRSF6	63	87.059	ENSMAMG00000023477	-	89	87.059	Mastacembelus_armatus
ENSCLAG00000010247	SRSF6	98	61.871	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSCLAG00000010247	SRSF6	98	58.333	ENSMZEG00005020658	-	64	64.167	Maylandia_zebra
ENSCLAG00000010247	SRSF6	100	98.519	ENSMAUG00000019086	-	100	98.519	Mesocricetus_auratus
ENSCLAG00000010247	SRSF6	100	100.000	ENSMICG00000008537	SRSF6	100	100.000	Microcebus_murinus
ENSCLAG00000010247	SRSF6	62	95.327	ENSMOCG00000018738	Srsf6	100	95.327	Microtus_ochrogaster
ENSCLAG00000010247	SRSF6	58	92.308	ENSMMOG00000015241	-	78	90.361	Mola_mola
ENSCLAG00000010247	SRSF6	58	97.436	ENSMODG00000003107	SRSF6	95	89.297	Monodelphis_domestica
ENSCLAG00000010247	SRSF6	100	98.519	MGP_CAROLIEiJ_G0024606	Srsf6	100	98.519	Mus_caroli
ENSCLAG00000010247	SRSF6	100	98.519	ENSMUSG00000016921	Srsf6	100	98.519	Mus_musculus
ENSCLAG00000010247	SRSF6	100	98.519	MGP_PahariEiJ_G0026050	Srsf6	100	98.519	Mus_pahari
ENSCLAG00000010247	SRSF6	100	98.519	MGP_SPRETEiJ_G0025528	Srsf6	100	98.519	Mus_spretus
ENSCLAG00000010247	SRSF6	84	97.569	ENSMPUG00000017692	SRSF6	99	97.569	Mustela_putorius_furo
ENSCLAG00000010247	SRSF6	94	80.745	ENSMLUG00000016618	SRSF6	94	80.864	Myotis_lucifugus
ENSCLAG00000010247	SRSF6	100	100.000	ENSNGAG00000017560	Srsf6	100	100.000	Nannospalax_galili
ENSCLAG00000010247	SRSF6	58	93.590	ENSNBRG00000001846	-	52	87.634	Neolamprologus_brichardi
ENSCLAG00000010247	SRSF6	56	89.474	ENSNBRG00000014709	-	58	83.696	Neolamprologus_brichardi
ENSCLAG00000010247	SRSF6	100	100.000	ENSNLEG00000006524	SRSF6	100	100.000	Nomascus_leucogenys
ENSCLAG00000010247	SRSF6	58	97.436	ENSMEUG00000014615	SRSF6	62	96.277	Notamacropus_eugenii
ENSCLAG00000010247	SRSF6	75	96.512	ENSOPRG00000002017	-	100	96.512	Ochotona_princeps
ENSCLAG00000010247	SRSF6	100	100.000	ENSODEG00000016510	-	100	100.000	Octodon_degus
ENSCLAG00000010247	SRSF6	58	93.590	ENSONIG00000001925	-	52	88.172	Oreochromis_niloticus
ENSCLAG00000010247	SRSF6	61	86.585	ENSONIG00000020247	-	53	84.239	Oreochromis_niloticus
ENSCLAG00000010247	SRSF6	74	58.498	ENSOCUG00000023999	-	70	63.687	Oryctolagus_cuniculus
ENSCLAG00000010247	SRSF6	84	80.392	ENSOCUG00000009785	-	98	83.784	Oryctolagus_cuniculus
ENSCLAG00000010247	SRSF6	58	94.872	ENSORLG00020017506	srsf6a	90	70.323	Oryzias_latipes_hni
ENSCLAG00000010247	SRSF6	95	95.692	ENSOGAG00000014468	SRSF6	94	95.988	Otolemur_garnettii
ENSCLAG00000010247	SRSF6	94	92.857	ENSOARG00000003117	SRSF6	94	92.901	Ovis_aries
ENSCLAG00000010247	SRSF6	91	84.566	ENSPPAG00000043131	-	100	86.817	Pan_paniscus
ENSCLAG00000010247	SRSF6	100	96.532	ENSPPAG00000034327	-	100	96.532	Pan_paniscus
ENSCLAG00000010247	SRSF6	94	96.605	ENSPPRG00000008917	SRSF6	94	96.605	Panthera_pardus
ENSCLAG00000010247	SRSF6	57	95.385	ENSPTIG00000019153	SRSF6	90	95.385	Panthera_tigris_altaica
ENSCLAG00000010247	SRSF6	100	100.000	ENSPTRG00000044686	-	100	100.000	Pan_troglodytes
ENSCLAG00000010247	SRSF6	91	84.566	ENSPTRG00000046274	-	100	86.817	Pan_troglodytes
ENSCLAG00000010247	SRSF6	100	100.000	ENSPANG00000035224	SRSF6	100	100.000	Papio_anubis
ENSCLAG00000010247	SRSF6	59	77.500	ENSPKIG00000015703	-	95	61.745	Paramormyrops_kingsleyae
ENSCLAG00000010247	SRSF6	98	62.121	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSCLAG00000010247	SRSF6	58	93.590	ENSPKIG00000015603	-	88	84.252	Paramormyrops_kingsleyae
ENSCLAG00000010247	SRSF6	88	72.131	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSCLAG00000010247	SRSF6	85	87.931	ENSPEMG00000022405	-	96	87.931	Peromyscus_maniculatus_bairdii
ENSCLAG00000010247	SRSF6	100	98.519	ENSPCIG00000003820	SRSF6	100	98.519	Phascolarctos_cinereus
ENSCLAG00000010247	SRSF6	58	92.308	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSCLAG00000010247	SRSF6	88	64.780	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSCLAG00000010247	SRSF6	58	92.308	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSCLAG00000010247	SRSF6	59	91.139	ENSPREG00000001040	srsf6a	87	83.846	Poecilia_reticulata
ENSCLAG00000010247	SRSF6	100	96.821	ENSPPYG00000011019	SRSF6	100	96.821	Pongo_abelii
ENSCLAG00000010247	SRSF6	58	98.718	ENSPCAG00000010954	SRSF6	96	92.593	Procavia_capensis
ENSCLAG00000010247	SRSF6	100	100.000	ENSPCOG00000026364	SRSF6	100	100.000	Propithecus_coquereli
ENSCLAG00000010247	SRSF6	94	94.136	ENSPVAG00000015232	SRSF6	94	94.136	Pteropus_vampyrus
ENSCLAG00000010247	SRSF6	58	93.590	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSCLAG00000010247	SRSF6	59	95.000	ENSPNAG00000023179	-	94	84.252	Pygocentrus_nattereri
ENSCLAG00000010247	SRSF6	100	95.918	ENSRNOG00000006380	Srsf6	100	95.918	Rattus_norvegicus
ENSCLAG00000010247	SRSF6	100	96.296	ENSRBIG00000041414	SRSF6	100	96.296	Rhinopithecus_bieti
ENSCLAG00000010247	SRSF6	100	100.000	ENSRROG00000029989	SRSF6	100	100.000	Rhinopithecus_roxellana
ENSCLAG00000010247	SRSF6	94	71.340	ENSSBOG00000034078	-	54	77.348	Saimiri_boliviensis_boliviensis
ENSCLAG00000010247	SRSF6	100	100.000	ENSSBOG00000033708	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCLAG00000010247	SRSF6	58	97.436	ENSSHAG00000012805	SRSF6	95	89.602	Sarcophilus_harrisii
ENSCLAG00000010247	SRSF6	56	94.737	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSCLAG00000010247	SRSF6	55	93.243	ENSSFOG00015015169	SRSF6	60	89.130	Scleropages_formosus
ENSCLAG00000010247	SRSF6	56	88.158	ENSSMAG00000017447	-	55	79.891	Scophthalmus_maximus
ENSCLAG00000010247	SRSF6	59	92.500	ENSSMAG00000014861	-	95	67.969	Scophthalmus_maximus
ENSCLAG00000010247	SRSF6	98	61.151	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSCLAG00000010247	SRSF6	63	87.059	ENSSDUG00000011036	-	90	87.059	Seriola_dumerili
ENSCLAG00000010247	SRSF6	63	87.059	ENSSLDG00000014858	-	90	87.059	Seriola_lalandi_dorsalis
ENSCLAG00000010247	SRSF6	98	61.871	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSCLAG00000010247	SRSF6	69	95.378	ENSSARG00000001602	SRSF6	88	94.760	Sorex_araneus
ENSCLAG00000010247	SRSF6	100	97.037	ENSSPUG00000004967	SRSF6	100	97.037	Sphenodon_punctatus
ENSCLAG00000010247	SRSF6	63	84.706	ENSSPAG00000021913	-	86	84.706	Stegastes_partitus
ENSCLAG00000010247	SRSF6	98	61.871	ENSSPAG00000002362	srsf6a	67	86.243	Stegastes_partitus
ENSCLAG00000010247	SRSF6	94	96.605	ENSSSCG00000007362	SRSF6	96	97.578	Sus_scrofa
ENSCLAG00000010247	SRSF6	93	84.308	ENSTGUG00000003455	SRSF6	94	84.802	Taeniopygia_guttata
ENSCLAG00000010247	SRSF6	59	92.500	ENSTRUG00000021397	-	87	92.500	Takifugu_rubripes
ENSCLAG00000010247	SRSF6	88	69.967	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSCLAG00000010247	SRSF6	85	92.123	ENSTBEG00000013448	SRSF6	92	92.440	Tupaia_belangeri
ENSCLAG00000010247	SRSF6	69	96.596	ENSTTRG00000015410	SRSF6	88	96.507	Tursiops_truncatus
ENSCLAG00000010247	SRSF6	100	99.259	ENSUAMG00000003559	SRSF6	100	99.259	Ursus_americanus
ENSCLAG00000010247	SRSF6	57	95.385	ENSUMAG00000001154	SRSF6	90	95.385	Ursus_maritimus
ENSCLAG00000010247	SRSF6	76	100.000	ENSVPAG00000003016	SRSF6	74	100.000	Vicugna_pacos
ENSCLAG00000010247	SRSF6	100	78.519	ENSVVUG00000019276	-	100	78.519	Vulpes_vulpes
ENSCLAG00000010247	SRSF6	58	92.308	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus