EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000010261 (Gene tree)
Gene ID: 102022093
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 28401 bases
Position: chrJH721953.1:8542058-8570458
Accession: 102022093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000014881	KH_1	PF00013.29	1.1e-13	1	1
ENSCLAP00000014881	DEAD	PF00270.29	1.6e-29	1	2
ENSCLAP00000014881	DEAD	PF00270.29	1.6e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000015040	-	1836	XM_013504889	ENSCLAP00000014881	611 (aa)	XP_013360343	-

Gene Model

Click here to download ENSCLAG00000010261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000010261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000010261	-	54	34.715	ENSCLAG00000000993	DDX3X	58	35.401
ENSCLAG00000010261	-	57	30.513	ENSCLAG00000012844	DDX49	82	30.513
ENSCLAG00000010261	-	66	41.295	ENSCLAG00000017294	DDX17	88	40.849
ENSCLAG00000010261	-	56	31.105	ENSCLAG00000006786	-	90	31.105
ENSCLAG00000010261	-	66	35.430	ENSCLAG00000002986	DDX23	55	35.220
ENSCLAG00000010261	-	57	35.696	ENSCLAG00000015404	DDX41	63	35.696
ENSCLAG00000010261	-	66	42.000	ENSCLAG00000006874	DDX5	71	42.000
ENSCLAG00000010261	-	52	31.405	ENSCLAG00000004684	DDX18	54	31.405
ENSCLAG00000010261	-	90	62.748	ENSCLAG00000017424	-	89	62.852
ENSCLAG00000010261	-	57	32.737	ENSCLAG00000015856	DDX47	85	32.737
ENSCLAG00000010261	-	57	35.696	ENSCLAG00000005386	DDX4	56	35.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000010261	-	100	75.115	ENSAMEG00000007851	-	100	74.501	Ailuropoda_melanoleuca
ENSCLAG00000010261	-	100	71.163	ENSBTAG00000021814	-	99	71.163	Bos_taurus
ENSCLAG00000010261	-	99	68.576	ENSCAFG00020002717	-	99	68.576	Canis_lupus_dingo
ENSCLAG00000010261	-	100	73.765	ENSCAFG00020010029	-	100	73.765	Canis_lupus_dingo
ENSCLAG00000010261	-	100	71.473	ENSCHIG00000017351	-	99	71.473	Capra_hircus
ENSCLAG00000010261	-	76	78.884	ENSCAPG00000004247	-	100	78.884	Cavia_aperea
ENSCLAG00000010261	-	100	86.574	ENSCPOG00000003991	-	100	86.574	Cavia_porcellus
ENSCLAG00000010261	-	58	80.000	ENSCHOG00000003450	-	63	78.846	Choloepus_hoffmanni
ENSCLAG00000010261	-	100	78.858	ENSCGRG00001001145	Ddx43	100	78.395	Cricetulus_griseus_chok1gshd
ENSCLAG00000010261	-	86	81.883	ENSCGRG00000010217	Ddx43	99	81.786	Cricetulus_griseus_crigri
ENSCLAG00000010261	-	100	75.422	ENSDNOG00000017589	-	99	74.962	Dasypus_novemcinctus
ENSCLAG00000010261	-	100	77.932	ENSDORG00000030010	Ddx43	100	77.932	Dipodomys_ordii
ENSCLAG00000010261	-	79	87.748	ENSETEG00000001887	-	76	87.748	Echinops_telfairi
ENSCLAG00000010261	-	100	75.347	ENSEASG00005004346	-	89	74.730	Equus_asinus_asinus
ENSCLAG00000010261	-	100	75.347	ENSECAG00000017971	DDX43	98	74.730	Equus_caballus
ENSCLAG00000010261	-	100	73.302	ENSFCAG00000031631	-	99	73.302	Felis_catus
ENSCLAG00000010261	-	86	85.080	ENSHGLG00000001118	-	99	85.000	Heterocephalus_glaber_female
ENSCLAG00000010261	-	96	83.200	ENSHGLG00100011895	-	99	81.804	Heterocephalus_glaber_male
ENSCLAG00000010261	-	86	82.319	ENSSTOG00000032538	-	99	82.218	Ictidomys_tridecemlineatus
ENSCLAG00000010261	-	100	78.086	ENSJJAG00000014184	Ddx43	100	78.086	Jaculus_jaculus
ENSCLAG00000010261	-	92	77.888	ENSLAFG00000012755	-	99	77.129	Loxodonta_africana
ENSCLAG00000010261	-	100	78.395	ENSMAUG00000001441	Ddx43	100	77.932	Mesocricetus_auratus
ENSCLAG00000010261	-	100	76.615	ENSMOCG00000012956	Ddx43	100	76.923	Microtus_ochrogaster
ENSCLAG00000010261	-	100	78.241	MGP_CAROLIEiJ_G0032467	Ddx43	100	77.932	Mus_caroli
ENSCLAG00000010261	-	100	78.549	ENSMUSG00000070291	Ddx43	100	78.241	Mus_musculus
ENSCLAG00000010261	-	90	81.349	MGP_PahariEiJ_G0015333	Ddx43	99	81.349	Mus_pahari
ENSCLAG00000010261	-	100	78.549	MGP_SPRETEiJ_G0033607	Ddx43	100	78.241	Mus_spretus
ENSCLAG00000010261	-	100	76.117	ENSMPUG00000004342	-	99	76.117	Mustela_putorius_furo
ENSCLAG00000010261	-	100	75.307	ENSMLUG00000017604	-	100	75.000	Myotis_lucifugus
ENSCLAG00000010261	-	100	77.932	ENSNGAG00000015102	Ddx43	100	78.086	Nannospalax_galili
ENSCLAG00000010261	-	73	90.179	ENSOPRG00000013523	-	85	90.179	Ochotona_princeps
ENSCLAG00000010261	-	83	85.294	ENSODEG00000016207	-	99	85.294	Octodon_degus
ENSCLAG00000010261	-	100	72.377	ENSOCUG00000006338	-	100	72.377	Oryctolagus_cuniculus
ENSCLAG00000010261	-	99	61.801	ENSOCUG00000025811	-	98	62.816	Oryctolagus_cuniculus
ENSCLAG00000010261	-	100	71.008	ENSOARG00000010873	-	99	71.008	Ovis_aries
ENSCLAG00000010261	-	100	73.457	ENSPTIG00000017842	-	99	73.457	Panthera_tigris_altaica
ENSCLAG00000010261	-	86	82.060	ENSPEMG00000023986	Ddx43	99	81.964	Peromyscus_maniculatus_bairdii
ENSCLAG00000010261	-	99	72.488	ENSPCAG00000005962	-	99	72.334	Procavia_capensis
ENSCLAG00000010261	-	86	80.319	ENSPVAG00000012718	-	99	80.214	Pteropus_vampyrus
ENSCLAG00000010261	-	100	78.858	ENSRNOG00000050868	Ddx43	100	78.395	Rattus_norvegicus
ENSCLAG00000010261	-	83	77.331	ENSSARG00000013493	-	99	77.331	Sorex_araneus
ENSCLAG00000010261	-	100	71.008	ENSSSCG00000004287	-	99	71.008	Sus_scrofa
ENSCLAG00000010261	-	86	68.941	ENSTTRG00000001488	-	99	68.773	Tursiops_truncatus
ENSCLAG00000010261	-	82	70.275	ENSUAMG00000012894	-	83	70.000	Ursus_americanus
ENSCLAG00000010261	-	100	75.193	ENSUMAG00000012291	-	99	75.193	Ursus_maritimus
ENSCLAG00000010261	-	94	67.492	ENSVPAG00000004969	-	100	67.492	Vicugna_pacos
ENSCLAG00000010261	-	100	73.302	ENSVVUG00000013908	-	100	73.302	Vulpes_vulpes