EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000010476 (Gene tree)
Gene ID: 102026004
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 88556 bases
Position: chrJH721877.1:10597450-10686005
Accession: 102026004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000015212	ResIII	PF04851.15	2.6e-12	1	1
ENSCLAP00000015211	ResIII	PF04851.15	2.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000015371	-	3857	XM_013512842	ENSCLAP00000015211	906 (aa)	XP_013368296	-
ENSCLAT00000015372	-	2664	-	ENSCLAP00000015212	887 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000010476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000010476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000010476	-	56	32.544	ENSCLAG00000000880	CHD1L	50	32.677
ENSCLAG00000010476	-	63	31.401	ENSCLAG00000016395	-	84	31.765
ENSCLAG00000010476	-	65	47.789	ENSCLAG00000004645	RAD54L	76	47.109
ENSCLAG00000010476	-	62	31.250	ENSCLAG00000006153	SMARCA5	51	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000010476	-	82	88.705	ENSG00000265817	FSBP	100	88.705	Homo_sapiens
ENSCLAG00000010476	-	100	85.071	ENSG00000197275	RAD54B	100	85.071	Homo_sapiens
ENSCLAG00000010476	-	99	83.516	ENSAMEG00000005834	-	99	83.516	Ailuropoda_melanoleuca
ENSCLAG00000010476	-	99	56.013	ENSACIG00000013005	rad54b	99	56.013	Amphilophus_citrinellus
ENSCLAG00000010476	-	99	54.478	ENSAOCG00000008523	rad54b	99	54.478	Amphiprion_ocellaris
ENSCLAG00000010476	-	99	55.357	ENSAPEG00000001673	rad54b	99	55.357	Amphiprion_percula
ENSCLAG00000010476	-	99	55.196	ENSATEG00000001527	rad54b	99	55.196	Anabas_testudineus
ENSCLAG00000010476	-	99	68.777	ENSAPLG00000014366	-	99	68.777	Anas_platyrhynchos
ENSCLAG00000010476	-	90	70.588	ENSACAG00000003671	-	99	70.588	Anolis_carolinensis
ENSCLAG00000010476	-	73	87.211	ENSANAG00000019528	-	100	87.211	Aotus_nancymaae
ENSCLAG00000010476	-	99	56.040	ENSACLG00000007826	rad54b	99	55.978	Astatotilapia_calliptera
ENSCLAG00000010476	-	88	57.323	ENSAMXG00000039985	rad54b	94	57.071	Astyanax_mexicanus
ENSCLAG00000010476	-	99	81.848	ENSBTAG00000000632	RAD54B	99	81.848	Bos_taurus
ENSCLAG00000010476	-	80	34.893	WBGene00013792	Y116A8C.13	97	33.060	Caenorhabditis_elegans
ENSCLAG00000010476	-	100	83.425	ENSCJAG00000000080	-	100	86.777	Callithrix_jacchus
ENSCLAG00000010476	-	99	81.868	ENSCAFG00000009179	RAD54B	99	81.868	Canis_familiaris
ENSCLAG00000010476	-	99	81.538	ENSCAFG00020012084	-	99	81.538	Canis_lupus_dingo
ENSCLAG00000010476	-	99	81.848	ENSCHIG00000008230	-	99	81.848	Capra_hircus
ENSCLAG00000010476	-	99	84.708	ENSTSYG00000013234	-	99	84.708	Carlito_syrichta
ENSCLAG00000010476	-	99	92.044	ENSCPOG00000011643	-	99	92.044	Cavia_porcellus
ENSCLAG00000010476	-	100	83.535	ENSCCAG00000011754	-	100	86.777	Cebus_capucinus
ENSCLAG00000010476	-	100	84.632	ENSCATG00000030661	-	100	88.154	Cercocebus_atys
ENSCLAG00000010476	-	100	84.303	ENSCSAG00000012712	-	100	84.303	Chlorocebus_sabaeus
ENSCLAG00000010476	-	100	69.156	ENSCPBG00000003204	-	99	69.637	Chrysemys_picta_bellii
ENSCLAG00000010476	-	100	84.303	ENSCANG00000017939	-	100	87.879	Colobus_angolensis_palliatus
ENSCLAG00000010476	-	99	81.603	ENSCGRG00001020184	Rad54b	99	81.603	Cricetulus_griseus_chok1gshd
ENSCLAG00000010476	-	99	80.158	ENSCGRG00000016752	Rad54b	99	80.158	Cricetulus_griseus_crigri
ENSCLAG00000010476	-	99	54.893	ENSCSEG00000001601	rad54b	99	54.893	Cynoglossus_semilaevis
ENSCLAG00000010476	-	99	57.559	ENSCVAG00000009200	rad54b	99	57.559	Cyprinodon_variegatus
ENSCLAG00000010476	-	99	53.587	ENSDARG00000092134	rad54b	99	59.601	Danio_rerio
ENSCLAG00000010476	-	99	81.559	ENSDNOG00000015535	-	99	81.559	Dasypus_novemcinctus
ENSCLAG00000010476	-	99	83.955	ENSDORG00000002492	Rad54b	99	83.955	Dipodomys_ordii
ENSCLAG00000010476	-	87	79.543	ENSETEG00000010605	-	100	79.543	Echinops_telfairi
ENSCLAG00000010476	-	99	48.276	ENSEBUG00000009104	rad54b	98	48.168	Eptatretus_burgeri
ENSCLAG00000010476	-	97	82.614	ENSEASG00005004021	-	99	82.614	Equus_asinus_asinus
ENSCLAG00000010476	-	99	82.599	ENSECAG00000021949	-	99	82.599	Equus_caballus
ENSCLAG00000010476	-	83	84.277	ENSEEUG00000008056	-	83	84.277	Erinaceus_europaeus
ENSCLAG00000010476	-	99	52.766	ENSELUG00000009287	rad54b	99	53.098	Esox_lucius
ENSCLAG00000010476	-	99	82.747	ENSFCAG00000015513	-	99	87.431	Felis_catus
ENSCLAG00000010476	-	99	67.101	ENSFALG00000005467	-	99	67.101	Ficedula_albicollis
ENSCLAG00000010476	-	99	90.308	ENSFDAG00000020541	-	100	90.308	Fukomys_damarensis
ENSCLAG00000010476	-	89	59.023	ENSFHEG00000014382	rad54b	89	57.875	Fundulus_heteroclitus
ENSCLAG00000010476	-	89	56.398	ENSGMOG00000014774	rad54b	99	56.398	Gadus_morhua
ENSCLAG00000010476	-	100	67.721	ENSGALG00000043597	RAD54B	99	67.721	Gallus_gallus
ENSCLAG00000010476	-	99	56.404	ENSGAFG00000007901	rad54b	99	56.404	Gambusia_affinis
ENSCLAG00000010476	-	99	53.863	ENSGACG00000009128	rad54b	99	53.863	Gasterosteus_aculeatus
ENSCLAG00000010476	-	100	68.553	ENSGAGG00000018747	-	99	68.553	Gopherus_agassizii
ENSCLAG00000010476	-	99	85.039	ENSGGOG00000023516	-	99	85.039	Gorilla_gorilla
ENSCLAG00000010476	-	99	54.439	ENSHBUG00000016017	rad54b	99	54.439	Haplochromis_burtoni
ENSCLAG00000010476	-	99	89.727	ENSHGLG00000008263	RAD54B	99	89.727	Heterocephalus_glaber_female
ENSCLAG00000010476	-	99	88.925	ENSHGLG00100008108	-	99	88.925	Heterocephalus_glaber_male
ENSCLAG00000010476	-	99	53.667	ENSHCOG00000004764	rad54b	99	55.247	Hippocampus_comes
ENSCLAG00000010476	-	99	52.615	ENSIPUG00000018531	rad54b	99	52.615	Ictalurus_punctatus
ENSCLAG00000010476	-	99	84.018	ENSSTOG00000010791	-	99	84.018	Ictidomys_tridecemlineatus
ENSCLAG00000010476	-	99	80.947	ENSJJAG00000010314	Rad54b	99	80.947	Jaculus_jaculus
ENSCLAG00000010476	-	99	54.372	ENSKMAG00000004744	rad54b	99	54.474	Kryptolebias_marmoratus
ENSCLAG00000010476	-	84	69.437	ENSLACG00000000859	-	100	69.437	Latimeria_chalumnae
ENSCLAG00000010476	-	99	57.585	ENSLOCG00000010100	rad54b	97	62.090	Lepisosteus_oculatus
ENSCLAG00000010476	-	91	83.955	ENSLAFG00000015315	-	99	83.995	Loxodonta_africana
ENSCLAG00000010476	-	100	84.523	ENSMFAG00000031629	-	100	88.017	Macaca_fascicularis
ENSCLAG00000010476	-	100	84.523	ENSMMUG00000005659	-	100	84.523	Macaca_mulatta
ENSCLAG00000010476	-	100	84.396	ENSMNEG00000016408	-	100	84.396	Macaca_nemestrina
ENSCLAG00000010476	-	100	84.523	ENSMLEG00000006946	-	100	84.523	Mandrillus_leucophaeus
ENSCLAG00000010476	-	99	55.605	ENSMAMG00000012269	rad54b	99	55.605	Mastacembelus_armatus
ENSCLAG00000010476	-	99	54.545	ENSMZEG00005005281	rad54b	97	58.171	Maylandia_zebra
ENSCLAG00000010476	-	100	67.176	ENSMGAG00000012024	-	99	67.176	Meleagris_gallopavo
ENSCLAG00000010476	-	99	80.405	ENSMAUG00000013586	Rad54b	99	80.405	Mesocricetus_auratus
ENSCLAG00000010476	-	99	82.373	ENSMICG00000000754	-	99	82.373	Microcebus_murinus
ENSCLAG00000010476	-	99	78.965	ENSMOCG00000020035	Rad54b	99	78.965	Microtus_ochrogaster
ENSCLAG00000010476	-	99	54.576	ENSMMOG00000003394	rad54b	99	54.576	Mola_mola
ENSCLAG00000010476	-	90	77.125	ENSMODG00000007343	-	99	77.125	Monodelphis_domestica
ENSCLAG00000010476	-	73	59.877	ENSMALG00000001520	rad54b	99	59.969	Monopterus_albus
ENSCLAG00000010476	-	99	81.081	MGP_CAROLIEiJ_G0025810	Rad54b	99	81.081	Mus_caroli
ENSCLAG00000010476	-	99	80.631	ENSMUSG00000078773	Rad54b	99	80.631	Mus_musculus
ENSCLAG00000010476	-	99	80.968	MGP_PahariEiJ_G0023933	Rad54b	99	80.968	Mus_pahari
ENSCLAG00000010476	-	99	81.532	MGP_SPRETEiJ_G0026758	Rad54b	99	81.532	Mus_spretus
ENSCLAG00000010476	-	91	84.969	ENSMPUG00000008878	-	99	85.130	Mustela_putorius_furo
ENSCLAG00000010476	-	99	81.099	ENSMLUG00000008953	-	99	81.099	Myotis_lucifugus
ENSCLAG00000010476	-	99	82.314	ENSNGAG00000017537	Rad54b	99	82.314	Nannospalax_galili
ENSCLAG00000010476	-	99	56.201	ENSNBRG00000013394	rad54b	99	56.201	Neolamprologus_brichardi
ENSCLAG00000010476	-	100	85.071	ENSNLEG00000003062	-	99	88.567	Nomascus_leucogenys
ENSCLAG00000010476	-	73	74.185	ENSMEUG00000012426	-	72	74.194	Notamacropus_eugenii
ENSCLAG00000010476	-	99	91.381	ENSODEG00000019564	-	99	91.381	Octodon_degus
ENSCLAG00000010476	-	91	84.969	ENSODEG00000002650	-	96	91.525	Octodon_degus
ENSCLAG00000010476	-	99	54.703	ENSONIG00000006067	rad54b	99	54.703	Oreochromis_niloticus
ENSCLAG00000010476	-	85	75.899	ENSOANG00000011348	-	99	75.899	Ornithorhynchus_anatinus
ENSCLAG00000010476	-	99	82.930	ENSOCUG00000016478	-	99	82.930	Oryctolagus_cuniculus
ENSCLAG00000010476	-	99	54.420	ENSORLG00000008918	rad54b	99	62.096	Oryzias_latipes
ENSCLAG00000010476	-	73	62.096	ENSORLG00020012171	rad54b	99	62.096	Oryzias_latipes_hni
ENSCLAG00000010476	-	99	54.942	ENSORLG00015018536	rad54b	99	54.942	Oryzias_latipes_hsok
ENSCLAG00000010476	-	87	59.692	ENSOMEG00000004345	rad54b	99	59.692	Oryzias_melastigma
ENSCLAG00000010476	-	99	83.278	ENSOGAG00000007854	-	99	83.278	Otolemur_garnettii
ENSCLAG00000010476	-	91	84.758	ENSOARG00000007691	-	99	84.796	Ovis_aries
ENSCLAG00000010476	-	100	83.205	ENSPPAG00000029572	-	100	83.205	Pan_paniscus
ENSCLAG00000010476	-	99	83.077	ENSPPRG00000007571	-	99	87.569	Panthera_pardus
ENSCLAG00000010476	-	82	87.707	ENSPTIG00000012670	-	99	87.707	Panthera_tigris_altaica
ENSCLAG00000010476	-	100	84.852	ENSPTRG00000020427	-	100	88.567	Pan_troglodytes
ENSCLAG00000010476	-	100	84.632	ENSPANG00000019566	-	100	84.632	Papio_anubis
ENSCLAG00000010476	-	99	56.972	ENSPKIG00000014974	rad54b	99	56.972	Paramormyrops_kingsleyae
ENSCLAG00000010476	-	100	68.152	ENSPSIG00000002383	-	98	73.540	Pelodiscus_sinensis
ENSCLAG00000010476	-	99	81.102	ENSPEMG00000012133	Rad54b	99	81.102	Peromyscus_maniculatus_bairdii
ENSCLAG00000010476	-	89	58.427	ENSPMAG00000002916	rad54b	99	58.427	Petromyzon_marinus
ENSCLAG00000010476	-	91	77.571	ENSPCIG00000020151	-	94	77.210	Phascolarctos_cinereus
ENSCLAG00000010476	-	99	55.074	ENSPFOG00000023411	rad54b	99	54.842	Poecilia_formosa
ENSCLAG00000010476	-	99	55.143	ENSPLAG00000010430	rad54b	99	54.910	Poecilia_latipinna
ENSCLAG00000010476	-	99	57.416	ENSPMEG00000016873	rad54b	99	57.416	Poecilia_mexicana
ENSCLAG00000010476	-	99	57.287	ENSPREG00000018443	rad54b	99	57.287	Poecilia_reticulata
ENSCLAG00000010476	-	100	84.962	ENSPPYG00000018750	-	100	84.962	Pongo_abelii
ENSCLAG00000010476	-	99	86.139	ENSPCOG00000026845	-	99	89.227	Propithecus_coquereli
ENSCLAG00000010476	-	88	86.757	ENSPVAG00000000261	-	92	86.757	Pteropus_vampyrus
ENSCLAG00000010476	-	88	59.212	ENSPNYG00000018303	rad54b	95	59.212	Pundamilia_nyererei
ENSCLAG00000010476	-	100	54.060	ENSPNAG00000000295	rad54b	99	54.060	Pygocentrus_nattereri
ENSCLAG00000010476	-	99	78.965	ENSRNOG00000039949	Rad54b	99	78.965	Rattus_norvegicus
ENSCLAG00000010476	-	100	83.754	ENSRBIG00000020419	-	100	83.754	Rhinopithecus_bieti
ENSCLAG00000010476	-	100	83.754	ENSRROG00000039897	-	100	83.754	Rhinopithecus_roxellana
ENSCLAG00000010476	-	80	37.327	YBR073W	RDH54	59	42.833	Saccharomyces_cerevisiae
ENSCLAG00000010476	-	100	83.535	ENSSBOG00000028501	-	100	83.535	Saimiri_boliviensis_boliviensis
ENSCLAG00000010476	-	100	72.727	ENSSHAG00000017038	-	100	72.727	Sarcophilus_harrisii
ENSCLAG00000010476	-	64	65.088	ENSSFOG00015008483	rad54b	88	65.088	Scleropages_formosus
ENSCLAG00000010476	-	99	54.343	ENSSMAG00000018659	rad54b	99	54.904	Scophthalmus_maximus
ENSCLAG00000010476	-	99	53.715	ENSSDUG00000001122	rad54b	98	53.781	Seriola_dumerili
ENSCLAG00000010476	-	99	53.911	ENSSLDG00000013787	rad54b	99	53.977	Seriola_lalandi_dorsalis
ENSCLAG00000010476	-	100	69.843	ENSSPUG00000016497	-	99	69.843	Sphenodon_punctatus
ENSCLAG00000010476	-	99	56.250	ENSSPAG00000012800	rad54b	99	56.250	Stegastes_partitus
ENSCLAG00000010476	-	100	81.518	ENSSSCG00000006101	-	99	85.607	Sus_scrofa
ENSCLAG00000010476	-	99	66.449	ENSTGUG00000011880	-	99	66.449	Taeniopygia_guttata
ENSCLAG00000010476	-	89	59.045	ENSTRUG00000010015	rad54b	99	53.333	Takifugu_rubripes
ENSCLAG00000010476	-	99	79.318	ENSTTRG00000006312	-	99	79.318	Tursiops_truncatus
ENSCLAG00000010476	-	99	83.516	ENSUMAG00000016401	-	99	83.516	Ursus_maritimus
ENSCLAG00000010476	-	99	82.178	ENSVPAG00000003157	-	99	82.178	Vicugna_pacos
ENSCLAG00000010476	-	99	56.215	ENSXETG00000025924	rad54b	99	59.352	Xenopus_tropicalis
ENSCLAG00000010476	-	99	56.902	ENSXMAG00000013141	rad54b	99	56.902	Xiphophorus_maculatus