EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000010479 (Gene tree)
Gene ID: 102017823
Gene Symbol: SALL4
Alias: ZNF797|dJ1112F19.1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 17418 bases
Position: chrJH721905.1:6824770-6842187
Accession: 102017823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000015218	zf-C2H2	PF00096.26	2.5e-27	1	6
ENSCLAP00000015218	zf-C2H2	PF00096.26	2.5e-27	2	6
ENSCLAP00000015218	zf-C2H2	PF00096.26	2.5e-27	3	6
ENSCLAP00000015218	zf-C2H2	PF00096.26	2.5e-27	4	6
ENSCLAP00000015218	zf-C2H2	PF00096.26	2.5e-27	5	6
ENSCLAP00000015218	zf-C2H2	PF00096.26	2.5e-27	6	6
ENSCLAP00000015219	zf-C2H2	PF00096.26	2.4e-12	1	2
ENSCLAP00000015219	zf-C2H2	PF00096.26	2.4e-12	2	2
ENSCLAP00000015218	zf-met	PF12874.7	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000015378	SALL4-201	5002	XM_005392290	ENSCLAP00000015218	1051 (aa)	XP_005392347	UPI00038EBFCE
ENSCLAT00000015379	SALL4-202	831	-	ENSCLAP00000015219	276 (aa)	-	UPI00038EE1AB

Gene Model

Click here to download ENSCLAG00000010479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000010479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000010479	SALL4	51	50.980	ENSCLAG00000003483	ZNF112	64	55.102
ENSCLAG00000010479	SALL4	51	51.852	ENSCLAG00000005392	PRDM5	76	50.000
ENSCLAG00000010479	SALL4	59	53.333	ENSCLAG00000007793	ZNF236	72	52.000
ENSCLAG00000010479	SALL4	51	47.059	ENSCLAG00000010195	-	77	47.059
ENSCLAG00000010479	SALL4	97	52.542	ENSCLAG00000007727	SALL3	89	63.462
ENSCLAG00000010479	SALL4	56	55.102	ENSCLAG00000012556	-	70	55.102
ENSCLAG00000010479	SALL4	100	63.462	ENSCLAG00000006380	SALL1	88	63.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000010479	SALL4	100	88.043	ENSG00000101115	SALL4	100	88.043	Homo_sapiens
ENSCLAG00000010479	SALL4	100	43.592	ENSAPOG00000002465	sall4	100	43.357	Acanthochromis_polyacanthus
ENSCLAG00000010479	SALL4	93	96.000	ENSAMEG00000013250	-	100	82.109	Ailuropoda_melanoleuca
ENSCLAG00000010479	SALL4	91	65.385	ENSACIG00000017298	sall4	100	42.583	Amphilophus_citrinellus
ENSCLAG00000010479	SALL4	100	43.896	ENSAOCG00000023678	sall4	100	43.576	Amphiprion_ocellaris
ENSCLAG00000010479	SALL4	100	43.478	ENSAPEG00000000751	sall4	100	43.156	Amphiprion_percula
ENSCLAG00000010479	SALL4	100	43.843	ENSATEG00000024480	sall4	100	43.368	Anabas_testudineus
ENSCLAG00000010479	SALL4	100	53.752	ENSAPLG00000006498	SALL4	100	53.886	Anas_platyrhynchos
ENSCLAG00000010479	SALL4	100	52.595	ENSACAG00000012748	SALL4	100	52.682	Anolis_carolinensis
ENSCLAG00000010479	SALL4	97	92.593	ENSANAG00000023352	SALL4	100	89.493	Aotus_nancymaae
ENSCLAG00000010479	SALL4	82	65.385	ENSACLG00000017851	sall4	100	43.406	Astatotilapia_calliptera
ENSCLAG00000010479	SALL4	99	44.138	ENSAMXG00000001254	sall4	99	44.658	Astyanax_mexicanus
ENSCLAG00000010479	SALL4	93	92.000	ENSBTAG00000003101	SALL4	100	77.413	Bos_taurus
ENSCLAG00000010479	SALL4	84	88.412	ENSCJAG00000000591	SALL4	99	84.390	Callithrix_jacchus
ENSCLAG00000010479	SALL4	100	87.124	ENSCAFG00000011738	-	100	82.170	Canis_familiaris
ENSCLAG00000010479	SALL4	100	87.124	ENSCAFG00020021870	SALL4	100	82.075	Canis_lupus_dingo
ENSCLAG00000010479	SALL4	93	92.000	ENSCHIG00000026270	SALL4	100	76.239	Capra_hircus
ENSCLAG00000010479	SALL4	100	86.266	ENSTSYG00000007359	SALL4	100	86.266	Carlito_syrichta
ENSCLAG00000010479	SALL4	99	81.981	ENSCAPG00000012135	SALL4	99	81.887	Cavia_aperea
ENSCLAG00000010479	SALL4	100	91.304	ENSCPOG00000036300	-	100	91.416	Cavia_porcellus
ENSCLAG00000010479	SALL4	100	78.281	ENSCCAG00000029512	-	100	81.481	Cebus_capucinus
ENSCLAG00000010479	SALL4	100	88.768	ENSCATG00000030757	SALL4	100	88.768	Cercocebus_atys
ENSCLAG00000010479	SALL4	100	87.983	ENSCSAG00000015269	SALL4	100	83.664	Chlorocebus_sabaeus
ENSCLAG00000010479	SALL4	100	55.439	ENSCPBG00000014995	SALL4	100	55.088	Chrysemys_picta_bellii
ENSCLAG00000010479	SALL4	100	87.983	ENSCANG00000036463	SALL4	100	83.569	Colobus_angolensis_palliatus
ENSCLAG00000010479	SALL4	100	81.034	ENSCGRG00001019569	Sall4	100	80.687	Cricetulus_griseus_chok1gshd
ENSCLAG00000010479	SALL4	100	81.034	ENSCGRG00000000462	Sall4	100	81.481	Cricetulus_griseus_crigri
ENSCLAG00000010479	SALL4	100	42.845	ENSCSEG00000014604	sall4	100	43.020	Cynoglossus_semilaevis
ENSCLAG00000010479	SALL4	92	65.385	ENSCVAG00000010815	sall4	100	43.821	Cyprinodon_variegatus
ENSCLAG00000010479	SALL4	99	45.117	ENSDARG00000044485	sall4	99	44.857	Danio_rerio
ENSCLAG00000010479	SALL4	100	84.681	ENSDNOG00000040633	SALL4	100	80.867	Dasypus_novemcinctus
ENSCLAG00000010479	SALL4	100	70.142	ENSDORG00000012841	Sall4	100	90.698	Dipodomys_ordii
ENSCLAG00000010479	SALL4	84	78.723	ENSETEG00000012475	-	65	73.277	Echinops_telfairi
ENSCLAG00000010479	SALL4	93	96.000	ENSECAG00000018533	SALL4	100	82.642	Equus_caballus
ENSCLAG00000010479	SALL4	100	77.462	ENSEEUG00000003649	SALL4	99	77.083	Erinaceus_europaeus
ENSCLAG00000010479	SALL4	86	65.385	ENSELUG00000005696	sall4	100	43.089	Esox_lucius
ENSCLAG00000010479	SALL4	100	85.507	ENSFCAG00000002822	SALL4	100	85.507	Felis_catus
ENSCLAG00000010479	SALL4	100	54.348	ENSFALG00000013149	SALL4	100	55.091	Ficedula_albicollis
ENSCLAG00000010479	SALL4	100	91.304	ENSFDAG00000017812	SALL4	100	91.304	Fukomys_damarensis
ENSCLAG00000010479	SALL4	100	44.425	ENSFHEG00000014187	sall4	100	44.084	Fundulus_heteroclitus
ENSCLAG00000010479	SALL4	100	42.932	ENSGMOG00000003822	sall4	100	42.647	Gadus_morhua
ENSCLAG00000010479	SALL4	100	53.705	ENSGALG00000041365	SALL4	100	53.799	Gallus_gallus
ENSCLAG00000010479	SALL4	86	65.385	ENSGAFG00000019925	sall4	100	44.035	Gambusia_affinis
ENSCLAG00000010479	SALL4	91	51.667	ENSGACG00000011124	sall4	100	42.284	Gasterosteus_aculeatus
ENSCLAG00000010479	SALL4	100	55.565	ENSGAGG00000002297	SALL4	100	55.215	Gopherus_agassizii
ENSCLAG00000010479	SALL4	100	88.406	ENSGGOG00000001832	SALL4	100	88.406	Gorilla_gorilla
ENSCLAG00000010479	SALL4	82	65.385	ENSHBUG00000007327	sall4	100	42.994	Haplochromis_burtoni
ENSCLAG00000010479	SALL4	96	87.598	ENSHGLG00000009043	SALL4	96	87.598	Heterocephalus_glaber_female
ENSCLAG00000010479	SALL4	96	87.598	ENSHGLG00100002722	SALL4	96	87.598	Heterocephalus_glaber_male
ENSCLAG00000010479	SALL4	91	65.385	ENSHCOG00000008519	sall4	100	42.770	Hippocampus_comes
ENSCLAG00000010479	SALL4	85	62.500	ENSIPUG00000019170	sall4	99	44.031	Ictalurus_punctatus
ENSCLAG00000010479	SALL4	94	92.593	ENSSTOG00000025002	SALL4	100	91.549	Ictidomys_tridecemlineatus
ENSCLAG00000010479	SALL4	100	85.408	ENSJJAG00000020688	Sall4	99	92.958	Jaculus_jaculus
ENSCLAG00000010479	SALL4	100	44.154	ENSKMAG00000002501	sall4	100	44.308	Kryptolebias_marmoratus
ENSCLAG00000010479	SALL4	100	44.348	ENSLBEG00000019951	sall4	100	43.864	Labrus_bergylta
ENSCLAG00000010479	SALL4	94	45.624	ENSLACG00000013898	SALL4	100	60.638	Latimeria_chalumnae
ENSCLAG00000010479	SALL4	100	47.084	ENSLOCG00000002427	sall4	100	47.336	Lepisosteus_oculatus
ENSCLAG00000010479	SALL4	100	86.695	ENSLAFG00000004309	SALL4	100	80.490	Loxodonta_africana
ENSCLAG00000010479	SALL4	100	87.983	ENSMFAG00000027169	SALL4	100	83.569	Macaca_fascicularis
ENSCLAG00000010479	SALL4	100	88.768	ENSMMUG00000003870	SALL4	100	88.768	Macaca_mulatta
ENSCLAG00000010479	SALL4	100	88.768	ENSMNEG00000035995	SALL4	100	88.768	Macaca_nemestrina
ENSCLAG00000010479	SALL4	100	87.554	ENSMLEG00000030467	SALL4	100	83.475	Mandrillus_leucophaeus
ENSCLAG00000010479	SALL4	100	43.396	ENSMAMG00000005223	sall4	100	43.336	Mastacembelus_armatus
ENSCLAG00000010479	SALL4	82	65.385	ENSMZEG00005023418	sall4	100	43.231	Maylandia_zebra
ENSCLAG00000010479	SALL4	78	63.462	ENSMGAG00000009344	SALL4	99	63.462	Meleagris_gallopavo
ENSCLAG00000010479	SALL4	100	79.310	ENSMAUG00000015814	Sall4	100	78.970	Mesocricetus_auratus
ENSCLAG00000010479	SALL4	100	88.406	ENSMICG00000000027	SALL4	100	89.270	Microcebus_murinus
ENSCLAG00000010479	SALL4	100	84.615	ENSMOCG00000018245	Sall4	100	90.411	Microtus_ochrogaster
ENSCLAG00000010479	SALL4	91	65.385	ENSMMOG00000014929	sall4	100	42.732	Mola_mola
ENSCLAG00000010479	SALL4	100	58.951	ENSMODG00000016387	SALL4	97	58.702	Monodelphis_domestica
ENSCLAG00000010479	SALL4	100	43.734	ENSMALG00000018709	sall4	99	44.548	Monopterus_albus
ENSCLAG00000010479	SALL4	100	82.008	MGP_CAROLIEiJ_G0024723	Sall4	100	91.667	Mus_caroli
ENSCLAG00000010479	SALL4	100	81.590	ENSMUSG00000027547	Sall4	100	91.667	Mus_musculus
ENSCLAG00000010479	SALL4	100	71.284	MGP_PahariEiJ_G0026164	Sall4	100	91.667	Mus_pahari
ENSCLAG00000010479	SALL4	100	80.142	MGP_SPRETEiJ_G0025643	Sall4	100	91.667	Mus_spretus
ENSCLAG00000010479	SALL4	95	86.667	ENSMPUG00000017543	SALL4	96	81.579	Mustela_putorius_furo
ENSCLAG00000010479	SALL4	96	79.154	ENSMLUG00000007060	-	100	78.761	Myotis_lucifugus
ENSCLAG00000010479	SALL4	100	71.065	ENSMLUG00000008405	-	100	70.688	Myotis_lucifugus
ENSCLAG00000010479	SALL4	91	88.000	ENSMLUG00000028073	-	99	58.263	Myotis_lucifugus
ENSCLAG00000010479	SALL4	100	85.199	ENSNGAG00000017833	Sall4	100	87.607	Nannospalax_galili
ENSCLAG00000010479	SALL4	86	65.385	ENSNBRG00000001829	sall4	100	43.293	Neolamprologus_brichardi
ENSCLAG00000010479	SALL4	100	86.695	ENSNLEG00000007013	SALL4	100	83.286	Nomascus_leucogenys
ENSCLAG00000010479	SALL4	83	63.462	ENSMEUG00000005793	-	99	63.462	Notamacropus_eugenii
ENSCLAG00000010479	SALL4	100	85.532	ENSOPRG00000011640	SALL4	100	78.873	Ochotona_princeps
ENSCLAG00000010479	SALL4	82	65.385	ENSONIG00000016557	sall4	100	43.668	Oreochromis_niloticus
ENSCLAG00000010479	SALL4	100	59.002	ENSOANG00000008667	SALL4	97	59.342	Ornithorhynchus_anatinus
ENSCLAG00000010479	SALL4	96	79.608	ENSOCUG00000011797	SALL4	100	79.216	Oryctolagus_cuniculus
ENSCLAG00000010479	SALL4	100	43.608	ENSORLG00000016130	sall4	100	43.972	Oryzias_latipes
ENSCLAG00000010479	SALL4	100	44.591	ENSORLG00020007339	sall4	100	44.007	Oryzias_latipes_hni
ENSCLAG00000010479	SALL4	100	44.084	ENSORLG00015002265	sall4	100	43.947	Oryzias_latipes_hsok
ENSCLAG00000010479	SALL4	100	44.046	ENSOMEG00000017344	sall4	100	44.209	Oryzias_melastigma
ENSCLAG00000010479	SALL4	94	80.841	ENSOGAG00000013799	SALL4	99	80.450	Otolemur_garnettii
ENSCLAG00000010479	SALL4	100	78.112	ENSOARG00000014570	SALL4	100	72.332	Ovis_aries
ENSCLAG00000010479	SALL4	100	88.406	ENSPPAG00000038064	SALL4	100	88.406	Pan_paniscus
ENSCLAG00000010479	SALL4	100	85.507	ENSPPRG00000008677	SALL4	100	85.507	Panthera_pardus
ENSCLAG00000010479	SALL4	100	88.406	ENSPTRG00000013631	SALL4	100	88.406	Pan_troglodytes
ENSCLAG00000010479	SALL4	100	88.768	ENSPANG00000021792	SALL4	100	88.768	Papio_anubis
ENSCLAG00000010479	SALL4	100	43.330	ENSPKIG00000007074	sall4	100	43.501	Paramormyrops_kingsleyae
ENSCLAG00000010479	SALL4	100	54.777	ENSPSIG00000009066	SALL4	100	55.039	Pelodiscus_sinensis
ENSCLAG00000010479	SALL4	91	51.667	ENSPMGG00000022551	sall4	100	42.561	Periophthalmus_magnuspinnatus
ENSCLAG00000010479	SALL4	100	84.615	ENSPEMG00000022706	Sall4	100	90.278	Peromyscus_maniculatus_bairdii
ENSCLAG00000010479	SALL4	100	57.496	ENSPCIG00000022838	SALL4	97	57.269	Phascolarctos_cinereus
ENSCLAG00000010479	SALL4	100	44.405	ENSPFOG00000001442	sall4	100	44.074	Poecilia_formosa
ENSCLAG00000010479	SALL4	100	44.317	ENSPLAG00000008760	sall4	100	43.986	Poecilia_latipinna
ENSCLAG00000010479	SALL4	100	44.395	ENSPMEG00000008497	sall4	100	44.063	Poecilia_mexicana
ENSCLAG00000010479	SALL4	100	44.356	ENSPREG00000021140	sall4	100	43.712	Poecilia_reticulata
ENSCLAG00000010479	SALL4	100	83.569	ENSPPYG00000011138	SALL4	100	83.286	Pongo_abelii
ENSCLAG00000010479	SALL4	100	75.354	ENSPCAG00000004726	SALL4	99	75.071	Procavia_capensis
ENSCLAG00000010479	SALL4	100	87.319	ENSPCOG00000016321	SALL4	100	87.554	Propithecus_coquereli
ENSCLAG00000010479	SALL4	94	79.899	ENSPVAG00000002075	SALL4	94	79.799	Pteropus_vampyrus
ENSCLAG00000010479	SALL4	86	65.385	ENSPNYG00000021738	sall4	100	43.118	Pundamilia_nyererei
ENSCLAG00000010479	SALL4	84	62.500	ENSPNAG00000020929	sall4	99	44.338	Pygocentrus_nattereri
ENSCLAG00000010479	SALL4	100	81.481	ENSRNOG00000050035	Sall4	100	86.667	Rattus_norvegicus
ENSCLAG00000010479	SALL4	100	87.124	ENSRBIG00000039876	SALL4	100	83.595	Rhinopithecus_bieti
ENSCLAG00000010479	SALL4	100	87.124	ENSRROG00000036585	SALL4	100	83.381	Rhinopithecus_roxellana
ENSCLAG00000010479	SALL4	100	87.554	ENSSBOG00000030011	SALL4	100	86.957	Saimiri_boliviensis_boliviensis
ENSCLAG00000010479	SALL4	100	67.773	ENSSHAG00000018013	SALL4	95	67.773	Sarcophilus_harrisii
ENSCLAG00000010479	SALL4	100	44.279	ENSSFOG00015021075	sall4	100	44.035	Scleropages_formosus
ENSCLAG00000010479	SALL4	100	43.585	ENSSMAG00000019218	sall4	99	43.673	Scophthalmus_maximus
ENSCLAG00000010479	SALL4	100	44.066	ENSSDUG00000004657	sall4	100	43.527	Seriola_dumerili
ENSCLAG00000010479	SALL4	100	44.146	ENSSLDG00000004973	sall4	100	43.847	Seriola_lalandi_dorsalis
ENSCLAG00000010479	SALL4	100	42.646	ENSSPAG00000001978	sall4	100	42.585	Stegastes_partitus
ENSCLAG00000010479	SALL4	100	86.638	ENSSSCG00000007479	SALL4	100	80.396	Sus_scrofa
ENSCLAG00000010479	SALL4	100	58.741	ENSTGUG00000018244	-	100	60.279	Taeniopygia_guttata
ENSCLAG00000010479	SALL4	82	65.385	ENSTRUG00000007410	sall4	100	43.849	Takifugu_rubripes
ENSCLAG00000010479	SALL4	100	42.709	ENSTNIG00000012460	sall4	100	42.982	Tetraodon_nigroviridis
ENSCLAG00000010479	SALL4	96	77.241	ENSTTRG00000007753	SALL4	100	77.241	Tursiops_truncatus
ENSCLAG00000010479	SALL4	93	96.000	ENSUAMG00000010113	SALL4	100	81.921	Ursus_americanus
ENSCLAG00000010479	SALL4	96	80.175	ENSUMAG00000024274	SALL4	99	80.528	Ursus_maritimus
ENSCLAG00000010479	SALL4	100	48.046	ENSXETG00000012326	sall4	100	47.760	Xenopus_tropicalis
ENSCLAG00000010479	SALL4	100	42.029	ENSXCOG00000015467	sall4	100	41.516	Xiphophorus_couchianus
ENSCLAG00000010479	SALL4	100	41.833	ENSXMAG00000012692	sall4	100	41.320	Xiphophorus_maculatus