EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000010589 (Gene tree)
Gene ID: 102014675
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 48686 bases
Position: chrJH721946.1:6320380-6369065
Accession: 102014675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000015386	ResIII	PF04851.15	6.7e-08	1	1
ENSCLAP00000015384	ResIII	PF04851.15	8.2e-08	1	1
ENSCLAP00000015385	ResIII	PF04851.15	8.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000015547	CHD5-203	5673	-	ENSCLAP00000015386	1890 (aa)	-	-
ENSCLAT00000015546	CHD5-202	8305	XM_005404102	ENSCLAP00000015385	1949 (aa)	XP_005404159	UPI00038EA9DA
ENSCLAT00000015545	CHD5-201	8467	XM_005404104	ENSCLAP00000015384	1937 (aa)	XP_005404161	-

Gene Model

Click here to download ENSCLAG00000010589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000010589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000010589	CHD5	98	70.279	ENSCLAG00000010523	CHD3	93	71.530
ENSCLAG00000010589	CHD5	94	72.727	ENSCLAG00000012244	-	95	72.210

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000010589	CHD5	99	95.062	ENSG00000116254	CHD5	99	95.267	Homo_sapiens
ENSCLAG00000010589	CHD5	99	94.655	ENSAMEG00000009880	CHD5	99	94.655	Ailuropoda_melanoleuca
ENSCLAG00000010589	CHD5	95	79.042	ENSACIG00000012582	chd5	98	79.121	Amphilophus_citrinellus
ENSCLAG00000010589	CHD5	95	80.273	ENSAOCG00000020356	chd5	90	79.869	Amphiprion_ocellaris
ENSCLAG00000010589	CHD5	96	82.087	ENSAPLG00000015475	CHD5	98	82.229	Anas_platyrhynchos
ENSCLAG00000010589	CHD5	100	81.487	ENSACAG00000002441	CHD5	99	82.172	Anolis_carolinensis
ENSCLAG00000010589	CHD5	87	95.742	ENSANAG00000001078	CHD5	91	95.742	Aotus_nancymaae
ENSCLAG00000010589	CHD5	95	76.227	ENSACLG00000003012	chd5	96	75.567	Astatotilapia_calliptera
ENSCLAG00000010589	CHD5	92	78.555	ENSAMXG00000008921	chd5	99	77.803	Astyanax_mexicanus
ENSCLAG00000010589	CHD5	94	96.150	ENSBTAG00000040477	CHD5	100	96.150	Bos_taurus
ENSCLAG00000010589	CHD5	99	94.856	ENSCJAG00000000101	CHD5	99	95.062	Callithrix_jacchus
ENSCLAG00000010589	CHD5	94	96.258	ENSCAFG00000019545	CHD5	100	96.258	Canis_familiaris
ENSCLAG00000010589	CHD5	99	95.703	ENSCAFG00020008689	CHD5	96	95.710	Canis_lupus_dingo
ENSCLAG00000010589	CHD5	99	94.136	ENSCHIG00000015027	CHD5	97	94.136	Capra_hircus
ENSCLAG00000010589	CHD5	99	91.031	ENSTSYG00000033991	CHD5	99	90.900	Carlito_syrichta
ENSCLAG00000010589	CHD5	100	97.778	ENSCAPG00000009294	CHD5	100	97.778	Cavia_aperea
ENSCLAG00000010589	CHD5	100	97.725	ENSCPOG00000025080	CHD5	100	97.725	Cavia_porcellus
ENSCLAG00000010589	CHD5	99	94.907	ENSCCAG00000024756	CHD5	99	95.113	Cebus_capucinus
ENSCLAG00000010589	CHD5	99	94.136	ENSCATG00000043011	CHD5	99	94.342	Cercocebus_atys
ENSCLAG00000010589	CHD5	99	95.267	ENSCSAG00000000733	CHD5	99	95.473	Chlorocebus_sabaeus
ENSCLAG00000010589	CHD5	94	90.565	ENSCPBG00000019363	CHD5	100	90.455	Chrysemys_picta_bellii
ENSCLAG00000010589	CHD5	99	95.753	ENSCANG00000032302	CHD5	99	95.753	Colobus_angolensis_palliatus
ENSCLAG00000010589	CHD5	56	96.981	ENSCGRG00001011042	Chd5	100	96.981	Cricetulus_griseus_chok1gshd
ENSCLAG00000010589	CHD5	100	95.238	ENSCGRG00000011341	Chd5	100	94.603	Cricetulus_griseus_crigri
ENSCLAG00000010589	CHD5	98	78.950	ENSDARG00000105083	chd5	97	81.120	Danio_rerio
ENSCLAG00000010589	CHD5	95	68.002	ENSDARG00000025789	chd4b	93	69.126	Danio_rerio
ENSCLAG00000010589	CHD5	99	90.329	ENSDNOG00000046342	CHD5	99	90.226	Dasypus_novemcinctus
ENSCLAG00000010589	CHD5	100	95.666	ENSDORG00000005923	Chd5	100	95.697	Dipodomys_ordii
ENSCLAG00000010589	CHD5	99	93.913	ENSEASG00005021464	CHD5	99	95.951	Equus_asinus_asinus
ENSCLAG00000010589	CHD5	99	93.496	ENSECAG00000025043	CHD5	98	97.917	Equus_caballus
ENSCLAG00000010589	CHD5	78	98.605	ENSEEUG00000002772	CHD5	77	98.605	Erinaceus_europaeus
ENSCLAG00000010589	CHD5	95	77.593	ENSELUG00000010742	chd5	95	78.409	Esox_lucius
ENSCLAG00000010589	CHD5	99	95.216	ENSFCAG00000006319	CHD5	99	94.702	Felis_catus
ENSCLAG00000010589	CHD5	99	88.184	ENSFALG00000009740	CHD5	99	87.771	Ficedula_albicollis
ENSCLAG00000010589	CHD5	99	97.205	ENSFDAG00000012881	CHD5	96	96.840	Fukomys_damarensis
ENSCLAG00000010589	CHD5	99	88.372	ENSGALG00000000747	CHD5	99	87.907	Gallus_gallus
ENSCLAG00000010589	CHD5	57	83.088	ENSGACG00000004389	chd5	93	83.180	Gasterosteus_aculeatus
ENSCLAG00000010589	CHD5	96	87.673	ENSGAGG00000001590	CHD5	99	95.610	Gopherus_agassizii
ENSCLAG00000010589	CHD5	99	95.745	ENSGGOG00000000708	CHD5	100	95.745	Gorilla_gorilla
ENSCLAG00000010589	CHD5	95	76.978	ENSHBUG00000013453	chd5	96	76.377	Haplochromis_burtoni
ENSCLAG00000010589	CHD5	100	97.302	ENSHGLG00000018184	CHD5	100	97.225	Heterocephalus_glaber_female
ENSCLAG00000010589	CHD5	99	90.427	ENSHGLG00100013261	CHD5	99	89.059	Heterocephalus_glaber_male
ENSCLAG00000010589	CHD5	95	78.780	ENSIPUG00000005446	chd5	98	79.160	Ictalurus_punctatus
ENSCLAG00000010589	CHD5	100	96.825	ENSSTOG00000002778	CHD5	100	96.825	Ictidomys_tridecemlineatus
ENSCLAG00000010589	CHD5	99	95.654	ENSJJAG00000019072	Chd5	99	94.974	Jaculus_jaculus
ENSCLAG00000010589	CHD5	98	82.859	ENSLOCG00000004944	chd5	94	82.634	Lepisosteus_oculatus
ENSCLAG00000010589	CHD5	99	95.691	ENSLAFG00000006348	CHD5	99	95.691	Loxodonta_africana
ENSCLAG00000010589	CHD5	100	95.612	ENSMFAG00000033993	CHD5	100	96.092	Macaca_fascicularis
ENSCLAG00000010589	CHD5	99	95.851	ENSMMUG00000016838	CHD5	99	95.851	Macaca_mulatta
ENSCLAG00000010589	CHD5	99	95.216	ENSMNEG00000040044	CHD5	99	95.422	Macaca_nemestrina
ENSCLAG00000010589	CHD5	99	92.524	ENSMLEG00000039166	CHD5	100	92.524	Mandrillus_leucophaeus
ENSCLAG00000010589	CHD5	90	81.541	ENSMZEG00005000841	chd5	91	81.124	Maylandia_zebra
ENSCLAG00000010589	CHD5	99	87.635	ENSMGAG00000001055	CHD5	99	87.378	Meleagris_gallopavo
ENSCLAG00000010589	CHD5	99	92.031	ENSMICG00000017862	CHD5	99	91.979	Microcebus_murinus
ENSCLAG00000010589	CHD5	99	95.236	ENSMOCG00000011049	Chd5	99	94.550	Microtus_ochrogaster
ENSCLAG00000010589	CHD5	87	79.908	ENSMODG00000006294	CHD5	78	94.226	Monodelphis_domestica
ENSCLAG00000010589	CHD5	95	79.235	ENSMALG00000002831	chd5	96	78.010	Monopterus_albus
ENSCLAG00000010589	CHD5	100	93.724	MGP_CAROLIEiJ_G0026857	Chd5	99	94.650	Mus_caroli
ENSCLAG00000010589	CHD5	99	94.870	ENSMUSG00000005045	Chd5	99	94.770	Mus_musculus
ENSCLAG00000010589	CHD5	99	95.074	MGP_PahariEiJ_G0029205	Chd5	99	95.079	Mus_pahari
ENSCLAG00000010589	CHD5	99	95.127	MGP_SPRETEiJ_G0027850	Chd5	99	95.132	Mus_spretus
ENSCLAG00000010589	CHD5	100	91.637	ENSMPUG00000007122	CHD5	100	91.637	Mustela_putorius_furo
ENSCLAG00000010589	CHD5	99	94.811	ENSNGAG00000019812	Chd5	96	94.811	Nannospalax_galili
ENSCLAG00000010589	CHD5	99	93.361	ENSNLEG00000010320	CHD5	100	93.150	Nomascus_leucogenys
ENSCLAG00000010589	CHD5	87	90.114	ENSOPRG00000004304	CHD5	87	90.038	Ochotona_princeps
ENSCLAG00000010589	CHD5	100	98.042	ENSODEG00000010262	CHD5	100	98.042	Octodon_degus
ENSCLAG00000010589	CHD5	95	78.829	ENSONIG00000000619	chd5	93	78.634	Oreochromis_niloticus
ENSCLAG00000010589	CHD5	97	73.101	ENSOANG00000001819	CHD5	98	72.880	Ornithorhynchus_anatinus
ENSCLAG00000010589	CHD5	99	92.949	ENSOGAG00000005703	CHD5	99	93.155	Otolemur_garnettii
ENSCLAG00000010589	CHD5	99	94.105	ENSOARG00000013425	CHD5	99	94.105	Ovis_aries
ENSCLAG00000010589	CHD5	99	95.695	ENSPPAG00000034048	CHD5	100	95.695	Pan_paniscus
ENSCLAG00000010589	CHD5	99	94.592	ENSPPRG00000009453	CHD5	99	94.084	Panthera_pardus
ENSCLAG00000010589	CHD5	99	87.487	ENSPTIG00000013926	CHD5	100	87.487	Panthera_tigris_altaica
ENSCLAG00000010589	CHD5	99	95.013	ENSPTRG00000000075	CHD5	99	95.219	Pan_troglodytes
ENSCLAG00000010589	CHD5	99	95.216	ENSPANG00000006765	CHD5	99	95.422	Papio_anubis
ENSCLAG00000010589	CHD5	95	78.930	ENSPKIG00000004282	chd5	98	78.306	Paramormyrops_kingsleyae
ENSCLAG00000010589	CHD5	96	82.729	ENSPSIG00000006414	CHD5	99	82.874	Pelodiscus_sinensis
ENSCLAG00000010589	CHD5	69	96.772	ENSPEMG00000014799	Chd5	100	96.772	Peromyscus_maniculatus_bairdii
ENSCLAG00000010589	CHD5	99	92.112	ENSPCIG00000028310	CHD5	98	91.163	Phascolarctos_cinereus
ENSCLAG00000010589	CHD5	95	77.129	ENSPLAG00000005343	chd5	92	85.000	Poecilia_latipinna
ENSCLAG00000010589	CHD5	96	97.536	ENSPPYG00000001952	CHD5	100	97.536	Pongo_abelii
ENSCLAG00000010589	CHD5	99	95.576	ENSPCOG00000022930	CHD5	99	95.782	Propithecus_coquereli
ENSCLAG00000010589	CHD5	95	78.242	ENSPNYG00000003183	chd5	98	78.280	Pundamilia_nyererei
ENSCLAG00000010589	CHD5	100	94.840	ENSRNOG00000011268	Chd5	100	94.169	Rattus_norvegicus
ENSCLAG00000010589	CHD5	95	96.877	ENSRBIG00000032140	CHD5	95	96.877	Rhinopithecus_bieti
ENSCLAG00000010589	CHD5	99	95.641	ENSRROG00000041146	CHD5	99	95.641	Rhinopithecus_roxellana
ENSCLAG00000010589	CHD5	99	91.096	ENSSBOG00000001955	CHD5	99	95.833	Saimiri_boliviensis_boliviensis
ENSCLAG00000010589	CHD5	97	86.167	ENSSHAG00000018641	CHD5	99	86.039	Sarcophilus_harrisii
ENSCLAG00000010589	CHD5	88	88.841	ENSSFOG00015006296	chd5	90	92.558	Scleropages_formosus
ENSCLAG00000010589	CHD5	95	78.950	ENSSDUG00000017526	chd5	98	80.176	Seriola_dumerili
ENSCLAG00000010589	CHD5	98	81.749	ENSSPUG00000010622	CHD5	98	80.777	Sphenodon_punctatus
ENSCLAG00000010589	CHD5	99	94.900	ENSSSCG00000003366	CHD5	100	96.037	Sus_scrofa
ENSCLAG00000010589	CHD5	94	84.887	ENSTGUG00000002634	-	100	84.666	Taeniopygia_guttata
ENSCLAG00000010589	CHD5	54	80.724	ENSTNIG00000004346	chd5	99	81.256	Tetraodon_nigroviridis
ENSCLAG00000010589	CHD5	99	94.345	ENSTTRG00000010468	CHD5	99	94.368	Tursiops_truncatus
ENSCLAG00000010589	CHD5	99	95.550	ENSUAMG00000024509	CHD5	98	95.550	Ursus_americanus
ENSCLAG00000010589	CHD5	99	90.414	ENSUMAG00000024173	CHD5	98	91.721	Ursus_maritimus
ENSCLAG00000010589	CHD5	99	94.648	ENSVVUG00000026480	CHD5	98	94.648	Vulpes_vulpes
ENSCLAG00000010589	CHD5	98	80.578	ENSXETG00000002904	chd5	99	79.756	Xenopus_tropicalis
ENSCLAG00000010589	CHD5	58	83.871	ENSXCOG00000014202	chd5	95	83.871	Xiphophorus_couchianus