EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000010751 (Gene tree)
Gene ID: 102022666
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 79485 bases
Position: chrJH721866.1:22273298-22352782
Accession: 102022666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000015650	EST1	PF10374.9	6.5e-25	1	1
ENSCLAP00000015649	EST1	PF10374.9	6.5e-25	1	1
ENSCLAP00000015651	EST1	PF10374.9	6.6e-25	1	1
ENSCLAP00000015652	EST1	PF10374.9	6.7e-25	1	1
ENSCLAP00000015650	EST1_DNA_bind	PF10373.9	6.5e-56	1	1
ENSCLAP00000015649	EST1_DNA_bind	PF10373.9	6.6e-56	1	1
ENSCLAP00000015651	EST1_DNA_bind	PF10373.9	6.6e-56	1	1
ENSCLAP00000015652	EST1_DNA_bind	PF10373.9	6.9e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000015814	SMG7-204	3682	XM_005375022	ENSCLAP00000015652	1170 (aa)	XP_005375079	UPI00038EFED1
ENSCLAT00000015811	SMG7-201	3949	XM_005375025	ENSCLAP00000015649	1141 (aa)	XP_005375082	UPI00038EB4C4
ENSCLAT00000015813	SMG7-203	4486	-	ENSCLAP00000015651	1149 (aa)	-	-
ENSCLAT00000015812	SMG7-202	3414	-	ENSCLAP00000015650	1137 (aa)	-	UPI00038EA450

Gene Model

Click here to download ENSCLAG00000010751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000010751's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000010751	SMG7	100	97.265	ENSG00000116698	SMG7	100	100.000	Homo_sapiens
ENSCLAG00000010751	SMG7	88	74.281	ENSAPOG00000009611	smg7	95	74.281	Acanthochromis_polyacanthus
ENSCLAG00000010751	SMG7	99	95.394	ENSAMEG00000002357	SMG7	99	95.306	Ailuropoda_melanoleuca
ENSCLAG00000010751	SMG7	97	63.993	ENSACIG00000015152	smg7	98	67.580	Amphilophus_citrinellus
ENSCLAG00000010751	SMG7	99	66.210	ENSAOCG00000013538	smg7	99	66.838	Amphiprion_ocellaris
ENSCLAG00000010751	SMG7	99	66.068	ENSAPEG00000007851	smg7	99	66.695	Amphiprion_percula
ENSCLAG00000010751	SMG7	99	65.874	ENSATEG00000006931	smg7	99	66.469	Anabas_testudineus
ENSCLAG00000010751	SMG7	100	88.101	ENSAPLG00000015811	SMG7	100	88.101	Anas_platyrhynchos
ENSCLAG00000010751	SMG7	100	84.043	ENSACAG00000014989	SMG7	100	84.378	Anolis_carolinensis
ENSCLAG00000010751	SMG7	100	96.394	ENSANAG00000028114	SMG7	100	96.394	Aotus_nancymaae
ENSCLAG00000010751	SMG7	99	65.081	ENSACLG00000022079	smg7	99	66.151	Astatotilapia_calliptera
ENSCLAG00000010751	SMG7	99	67.389	ENSAMXG00000020809	smg7	99	67.678	Astyanax_mexicanus
ENSCLAG00000010751	SMG7	100	95.897	ENSBTAG00000008003	SMG7	100	95.897	Bos_taurus
ENSCLAG00000010751	SMG7	100	96.780	ENSCJAG00000005135	SMG7	100	96.827	Callithrix_jacchus
ENSCLAG00000010751	SMG7	100	96.519	ENSCAFG00000013276	SMG7	100	96.496	Canis_familiaris
ENSCLAG00000010751	SMG7	100	96.519	ENSCAFG00020015475	SMG7	100	96.496	Canis_lupus_dingo
ENSCLAG00000010751	SMG7	99	96.028	ENSCHIG00000018192	SMG7	99	96.028	Capra_hircus
ENSCLAG00000010751	SMG7	100	96.258	ENSTSYG00000002667	SMG7	100	96.239	Carlito_syrichta
ENSCLAG00000010751	SMG7	100	98.259	ENSCPOG00000008906	SMG7	100	98.285	Cavia_porcellus
ENSCLAG00000010751	SMG7	100	96.482	ENSCCAG00000028596	SMG7	100	96.482	Cebus_capucinus
ENSCLAG00000010751	SMG7	100	97.436	ENSCATG00000011063	SMG7	100	97.436	Cercocebus_atys
ENSCLAG00000010751	SMG7	100	97.265	ENSCSAG00000012654	SMG7	100	97.265	Chlorocebus_sabaeus
ENSCLAG00000010751	SMG7	92	88.252	ENSCHOG00000010522	SMG7	93	88.634	Choloepus_hoffmanni
ENSCLAG00000010751	SMG7	100	90.798	ENSCPBG00000015724	SMG7	100	90.798	Chrysemys_picta_bellii
ENSCLAG00000010751	SMG7	99	96.720	ENSCANG00000015680	SMG7	99	96.720	Colobus_angolensis_palliatus
ENSCLAG00000010751	SMG7	100	95.474	ENSCGRG00001013705	Smg7	100	95.540	Cricetulus_griseus_chok1gshd
ENSCLAG00000010751	SMG7	100	95.474	ENSCGRG00000018401	Smg7	100	95.474	Cricetulus_griseus_crigri
ENSCLAG00000010751	SMG7	95	68.000	ENSCVAG00000011842	smg7	100	64.144	Cyprinodon_variegatus
ENSCLAG00000010751	SMG7	99	67.675	ENSDARG00000060767	smg7	99	67.584	Danio_rerio
ENSCLAG00000010751	SMG7	100	95.822	ENSDORG00000007331	Smg7	100	95.822	Dipodomys_ordii
ENSCLAG00000010751	SMG7	97	95.018	ENSETEG00000002654	SMG7	100	95.018	Echinops_telfairi
ENSCLAG00000010751	SMG7	100	97.020	ENSEASG00005006524	SMG7	100	97.020	Equus_asinus_asinus
ENSCLAG00000010751	SMG7	100	97.108	ENSECAG00000004313	SMG7	100	97.108	Equus_caballus
ENSCLAG00000010751	SMG7	97	94.842	ENSEEUG00000002024	SMG7	94	94.842	Erinaceus_europaeus
ENSCLAG00000010751	SMG7	99	64.769	ENSELUG00000010293	smg7	99	65.606	Esox_lucius
ENSCLAG00000010751	SMG7	100	96.757	ENSFCAG00000010900	SMG7	100	97.238	Felis_catus
ENSCLAG00000010751	SMG7	98	82.908	ENSFALG00000003047	SMG7	100	82.908	Ficedula_albicollis
ENSCLAG00000010751	SMG7	99	97.103	ENSFDAG00000012121	SMG7	99	97.504	Fukomys_damarensis
ENSCLAG00000010751	SMG7	99	64.469	ENSFHEG00000011073	smg7	99	63.891	Fundulus_heteroclitus
ENSCLAG00000010751	SMG7	89	67.883	ENSGMOG00000004916	smg7	92	67.883	Gadus_morhua
ENSCLAG00000010751	SMG7	100	88.462	ENSGALG00000004667	SMG7	100	88.462	Gallus_gallus
ENSCLAG00000010751	SMG7	99	64.666	ENSGAFG00000019000	smg7	99	64.580	Gambusia_affinis
ENSCLAG00000010751	SMG7	97	64.685	ENSGACG00000001634	smg7	99	65.240	Gasterosteus_aculeatus
ENSCLAG00000010751	SMG7	100	97.215	ENSGGOG00000002342	SMG7	100	97.179	Gorilla_gorilla
ENSCLAG00000010751	SMG7	99	64.847	ENSHBUG00000003726	smg7	97	72.081	Haplochromis_burtoni
ENSCLAG00000010751	SMG7	100	97.098	ENSHGLG00000009353	SMG7	100	97.683	Heterocephalus_glaber_female
ENSCLAG00000010751	SMG7	100	89.746	ENSHGLG00100004878	-	100	89.746	Heterocephalus_glaber_male
ENSCLAG00000010751	SMG7	100	97.186	ENSHGLG00100009637	-	100	97.186	Heterocephalus_glaber_male
ENSCLAG00000010751	SMG7	99	67.972	ENSIPUG00000016997	smg7	99	68.233	Ictalurus_punctatus
ENSCLAG00000010751	SMG7	100	97.389	ENSSTOG00000000401	SMG7	100	97.389	Ictidomys_tridecemlineatus
ENSCLAG00000010751	SMG7	100	94.917	ENSJJAG00000012351	Smg7	100	94.917	Jaculus_jaculus
ENSCLAG00000010751	SMG7	97	62.072	ENSKMAG00000004900	smg7	96	70.000	Kryptolebias_marmoratus
ENSCLAG00000010751	SMG7	52	62.500	ENSLBEG00000005220	-	75	64.448	Labrus_bergylta
ENSCLAG00000010751	SMG7	99	65.833	ENSLBEG00000002983	smg7	99	66.091	Labrus_bergylta
ENSCLAG00000010751	SMG7	99	75.260	ENSLACG00000000972	SMG7	99	75.326	Latimeria_chalumnae
ENSCLAG00000010751	SMG7	99	67.475	ENSLOCG00000002010	smg7	99	67.893	Lepisosteus_oculatus
ENSCLAG00000010751	SMG7	100	96.258	ENSLAFG00000008186	SMG7	100	96.258	Loxodonta_africana
ENSCLAG00000010751	SMG7	100	97.350	ENSMFAG00000031653	SMG7	100	97.350	Macaca_fascicularis
ENSCLAG00000010751	SMG7	100	97.436	ENSMMUG00000018458	SMG7	100	97.436	Macaca_mulatta
ENSCLAG00000010751	SMG7	100	96.834	ENSMNEG00000034798	SMG7	100	96.834	Macaca_nemestrina
ENSCLAG00000010751	SMG7	100	97.436	ENSMLEG00000037170	SMG7	100	97.436	Mandrillus_leucophaeus
ENSCLAG00000010751	SMG7	88	65.344	ENSMAMG00000018733	smg7	85	65.437	Mastacembelus_armatus
ENSCLAG00000010751	SMG7	99	65.556	ENSMZEG00005015247	smg7	99	66.065	Maylandia_zebra
ENSCLAG00000010751	SMG7	97	88.230	ENSMGAG00000001561	SMG7	98	88.230	Meleagris_gallopavo
ENSCLAG00000010751	SMG7	100	95.909	ENSMAUG00000019484	Smg7	100	95.909	Mesocricetus_auratus
ENSCLAG00000010751	SMG7	100	97.128	ENSMICG00000007145	SMG7	100	97.128	Microcebus_murinus
ENSCLAG00000010751	SMG7	100	95.822	ENSMOCG00000020748	Smg7	100	95.822	Microtus_ochrogaster
ENSCLAG00000010751	SMG7	99	64.385	ENSMMOG00000001524	smg7	99	64.675	Mola_mola
ENSCLAG00000010751	SMG7	92	91.841	ENSMODG00000007139	SMG7	99	91.841	Monodelphis_domestica
ENSCLAG00000010751	SMG7	99	65.550	ENSMALG00000000061	smg7	95	68.159	Monopterus_albus
ENSCLAG00000010751	SMG7	100	95.474	MGP_CAROLIEiJ_G0014704	Smg7	100	95.126	Mus_caroli
ENSCLAG00000010751	SMG7	100	95.387	ENSMUSG00000042772	Smg7	100	95.387	Mus_musculus
ENSCLAG00000010751	SMG7	100	95.387	MGP_PahariEiJ_G0027940	Smg7	100	95.387	Mus_pahari
ENSCLAG00000010751	SMG7	100	95.474	MGP_SPRETEiJ_G0015511	Smg7	100	95.474	Mus_spretus
ENSCLAG00000010751	SMG7	98	96.435	ENSMPUG00000011732	SMG7	97	96.435	Mustela_putorius_furo
ENSCLAG00000010751	SMG7	99	96.028	ENSMLUG00000015417	SMG7	99	96.028	Myotis_lucifugus
ENSCLAG00000010751	SMG7	100	95.822	ENSNGAG00000009836	Smg7	100	95.822	Nannospalax_galili
ENSCLAG00000010751	SMG7	98	61.130	ENSNBRG00000024343	smg7	98	70.000	Neolamprologus_brichardi
ENSCLAG00000010751	SMG7	100	97.436	ENSNLEG00000018018	SMG7	100	97.436	Nomascus_leucogenys
ENSCLAG00000010751	SMG7	77	85.431	ENSMEUG00000004681	SMG7	73	91.057	Notamacropus_eugenii
ENSCLAG00000010751	SMG7	96	84.658	ENSOPRG00000013942	SMG7	96	84.384	Ochotona_princeps
ENSCLAG00000010751	SMG7	100	98.433	ENSODEG00000010390	SMG7	100	98.433	Octodon_degus
ENSCLAG00000010751	SMG7	99	64.776	ENSONIG00000000277	smg7	99	65.839	Oreochromis_niloticus
ENSCLAG00000010751	SMG7	98	90.248	ENSOANG00000000994	SMG7	100	90.691	Ornithorhynchus_anatinus
ENSCLAG00000010751	SMG7	100	89.817	ENSOCUG00000005887	SMG7	95	89.829	Oryctolagus_cuniculus
ENSCLAG00000010751	SMG7	99	63.762	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSCLAG00000010751	SMG7	99	64.193	ENSORLG00020015779	smg7	99	64.021	Oryzias_latipes_hni
ENSCLAG00000010751	SMG7	99	64.858	ENSORLG00015012289	smg7	99	63.715	Oryzias_latipes_hsok
ENSCLAG00000010751	SMG7	99	63.009	ENSOMEG00000002328	smg7	99	62.926	Oryzias_melastigma
ENSCLAG00000010751	SMG7	97	94.832	ENSOGAG00000003107	SMG7	94	94.742	Otolemur_garnettii
ENSCLAG00000010751	SMG7	100	95.897	ENSOARG00000001352	SMG7	100	95.897	Ovis_aries
ENSCLAG00000010751	SMG7	100	96.834	ENSPPAG00000031619	SMG7	100	96.834	Pan_paniscus
ENSCLAG00000010751	SMG7	100	96.867	ENSPPRG00000011222	SMG7	100	96.920	Panthera_pardus
ENSCLAG00000010751	SMG7	96	96.718	ENSPTIG00000007242	SMG7	100	92.926	Panthera_tigris_altaica
ENSCLAG00000010751	SMG7	100	96.834	ENSPTRG00000001764	SMG7	100	96.834	Pan_troglodytes
ENSCLAG00000010751	SMG7	100	97.436	ENSPANG00000004520	SMG7	100	97.436	Papio_anubis
ENSCLAG00000010751	SMG7	99	64.912	ENSPKIG00000007242	smg7	99	69.802	Paramormyrops_kingsleyae
ENSCLAG00000010751	SMG7	99	91.174	ENSPSIG00000012201	SMG7	99	91.086	Pelodiscus_sinensis
ENSCLAG00000010751	SMG7	71	43.349	ENSPMGG00000021833	smg7	89	57.653	Periophthalmus_magnuspinnatus
ENSCLAG00000010751	SMG7	100	94.778	ENSPEMG00000011315	Smg7	100	94.778	Peromyscus_maniculatus_bairdii
ENSCLAG00000010751	SMG7	100	92.179	ENSPCIG00000003786	SMG7	100	92.179	Phascolarctos_cinereus
ENSCLAG00000010751	SMG7	99	63.336	ENSPFOG00000019219	smg7	99	63.366	Poecilia_formosa
ENSCLAG00000010751	SMG7	99	64.655	ENSPLAG00000001446	smg7	99	64.397	Poecilia_latipinna
ENSCLAG00000010751	SMG7	96	64.039	ENSPMEG00000005218	smg7	99	63.773	Poecilia_mexicana
ENSCLAG00000010751	SMG7	87	61.622	ENSPREG00000019039	smg7	91	61.561	Poecilia_reticulata
ENSCLAG00000010751	SMG7	100	96.922	ENSPPYG00000000427	SMG7	100	96.922	Pongo_abelii
ENSCLAG00000010751	SMG7	95	84.502	ENSPCAG00000008360	SMG7	94	84.502	Procavia_capensis
ENSCLAG00000010751	SMG7	100	97.215	ENSPCOG00000011996	SMG7	100	97.179	Propithecus_coquereli
ENSCLAG00000010751	SMG7	92	90.918	ENSPVAG00000000851	SMG7	89	91.250	Pteropus_vampyrus
ENSCLAG00000010751	SMG7	99	65.663	ENSPNYG00000007643	smg7	99	66.007	Pundamilia_nyererei
ENSCLAG00000010751	SMG7	99	68.021	ENSPNAG00000011374	smg7	98	71.717	Pygocentrus_nattereri
ENSCLAG00000010751	SMG7	100	95.478	ENSRNOG00000027962	Smg7	100	96.296	Rattus_norvegicus
ENSCLAG00000010751	SMG7	100	97.350	ENSRBIG00000036316	SMG7	100	97.350	Rhinopithecus_bieti
ENSCLAG00000010751	SMG7	100	97.350	ENSRROG00000035719	SMG7	100	97.350	Rhinopithecus_roxellana
ENSCLAG00000010751	SMG7	100	96.845	ENSSBOG00000023454	SMG7	100	96.845	Saimiri_boliviensis_boliviensis
ENSCLAG00000010751	SMG7	100	91.747	ENSSHAG00000013147	SMG7	100	91.747	Sarcophilus_harrisii
ENSCLAG00000010751	SMG7	99	69.110	ENSSFOG00015017252	smg7	99	76.316	Scleropages_formosus
ENSCLAG00000010751	SMG7	99	65.919	ENSSMAG00000006067	smg7	99	65.722	Scophthalmus_maximus
ENSCLAG00000010751	SMG7	95	71.905	ENSSDUG00000017543	smg7	99	65.850	Seriola_dumerili
ENSCLAG00000010751	SMG7	99	88.958	ENSSPUG00000002064	SMG7	99	88.958	Sphenodon_punctatus
ENSCLAG00000010751	SMG7	100	65.484	ENSSPAG00000008733	smg7	100	65.891	Stegastes_partitus
ENSCLAG00000010751	SMG7	100	96.845	ENSSSCG00000015558	SMG7	100	96.845	Sus_scrofa
ENSCLAG00000010751	SMG7	99	88.546	ENSTGUG00000003928	SMG7	100	88.546	Taeniopygia_guttata
ENSCLAG00000010751	SMG7	99	63.812	ENSTNIG00000002802	smg7	99	64.111	Tetraodon_nigroviridis
ENSCLAG00000010751	SMG7	77	93.348	ENSTBEG00000003220	SMG7	75	93.777	Tupaia_belangeri
ENSCLAG00000010751	SMG7	96	96.438	ENSTTRG00000014778	SMG7	94	96.438	Tursiops_truncatus
ENSCLAG00000010751	SMG7	96	92.603	ENSUAMG00000017473	SMG7	100	92.603	Ursus_americanus
ENSCLAG00000010751	SMG7	96	96.633	ENSUMAG00000016389	SMG7	100	96.633	Ursus_maritimus
ENSCLAG00000010751	SMG7	100	96.670	ENSVVUG00000008976	SMG7	100	97.123	Vulpes_vulpes
ENSCLAG00000010751	SMG7	100	70.996	ENSXETG00000012528	smg7	100	70.884	Xenopus_tropicalis
ENSCLAG00000010751	SMG7	99	64.605	ENSXMAG00000007123	smg7	99	64.691	Xiphophorus_maculatus