EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000011241 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Plus strand
Length: 18803 bases
Position: chrJH721887.1:1687694-1706496
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000016335	CMS1	PF14617.6	4.8e-32	1	1
ENSCLAP00000016335	DEAD	PF00270.29	9.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000016499	CMSS1-201	702	-	ENSCLAP00000016335	233 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000011241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000011241's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000011241	CMSS1	98	93.450	ENSG00000184220	CMSS1	99	96.296	Homo_sapiens
ENSCLAG00000011241	CMSS1	87	63.861	ENSAPOG00000010604	cmss1	81	63.500	Acanthochromis_polyacanthus
ENSCLAG00000011241	CMSS1	98	93.913	ENSAMEG00000004092	CMSS1	89	93.913	Ailuropoda_melanoleuca
ENSCLAG00000011241	CMSS1	87	54.950	ENSACIG00000021854	cmss1	74	54.500	Amphilophus_citrinellus
ENSCLAG00000011241	CMSS1	87	63.861	ENSAOCG00000013361	cmss1	69	63.500	Amphiprion_ocellaris
ENSCLAG00000011241	CMSS1	87	63.861	ENSAPEG00000005829	cmss1	69	63.500	Amphiprion_percula
ENSCLAG00000011241	CMSS1	97	61.404	ENSATEG00000008209	cmss1	80	60.345	Anabas_testudineus
ENSCLAG00000011241	CMSS1	98	69.565	ENSAPLG00000010542	CMSS1	100	69.565	Anas_platyrhynchos
ENSCLAG00000011241	CMSS1	98	68.240	ENSACAG00000011065	CMSS1	85	68.240	Anolis_carolinensis
ENSCLAG00000011241	CMSS1	98	93.013	ENSANAG00000023565	CMSS1	87	93.013	Aotus_nancymaae
ENSCLAG00000011241	CMSS1	87	60.891	ENSACLG00000027294	cmss1	69	60.500	Astatotilapia_calliptera
ENSCLAG00000011241	CMSS1	86	55.500	ENSAMXG00000002046	cmss1	68	55.500	Astyanax_mexicanus
ENSCLAG00000011241	CMSS1	98	91.667	ENSBTAG00000013663	CMSS1	83	91.667	Bos_taurus
ENSCLAG00000011241	CMSS1	98	92.576	ENSCJAG00000000610	CMSS1	87	92.576	Callithrix_jacchus
ENSCLAG00000011241	CMSS1	98	93.886	ENSCAFG00000009230	CMSS1	83	93.886	Canis_familiaris
ENSCLAG00000011241	CMSS1	97	87.611	ENSCAFG00020024156	-	71	87.611	Canis_lupus_dingo
ENSCLAG00000011241	CMSS1	98	93.886	ENSCAFG00020009464	-	84	93.886	Canis_lupus_dingo
ENSCLAG00000011241	CMSS1	98	92.105	ENSCHIG00000013003	CMSS1	83	92.105	Capra_hircus
ENSCLAG00000011241	CMSS1	98	90.393	ENSTSYG00000009266	CMSS1	88	90.393	Carlito_syrichta
ENSCLAG00000011241	CMSS1	96	75.546	ENSCAPG00000013584	CMSS1	100	71.368	Cavia_aperea
ENSCLAG00000011241	CMSS1	98	94.323	ENSCPOG00000014680	CMSS1	82	94.323	Cavia_porcellus
ENSCLAG00000011241	CMSS1	98	93.450	ENSCCAG00000034685	CMSS1	87	93.450	Cebus_capucinus
ENSCLAG00000011241	CMSS1	98	93.886	ENSCATG00000031980	CMSS1	88	93.886	Cercocebus_atys
ENSCLAG00000011241	CMSS1	98	93.886	ENSCSAG00000006024	CMSS1	93	93.886	Chlorocebus_sabaeus
ENSCLAG00000011241	CMSS1	98	69.432	ENSCHOG00000012098	CMSS1	83	69.432	Choloepus_hoffmanni
ENSCLAG00000011241	CMSS1	84	40.500	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSCLAG00000011241	CMSS1	54	40.476	ENSCSAVG00000002309	-	99	40.476	Ciona_savignyi
ENSCLAG00000011241	CMSS1	98	93.450	ENSCANG00000031337	CMSS1	88	93.450	Colobus_angolensis_palliatus
ENSCLAG00000011241	CMSS1	98	83.406	ENSCGRG00001014305	Cmss1	82	83.406	Cricetulus_griseus_chok1gshd
ENSCLAG00000011241	CMSS1	98	83.843	ENSCGRG00000006722	Cmss1	89	83.843	Cricetulus_griseus_crigri
ENSCLAG00000011241	CMSS1	87	62.871	ENSCSEG00000004958	cmss1	68	62.500	Cynoglossus_semilaevis
ENSCLAG00000011241	CMSS1	87	60.891	ENSCVAG00000005039	cmss1	69	61.000	Cyprinodon_variegatus
ENSCLAG00000011241	CMSS1	97	52.814	ENSDARG00000112579	cmss1	79	52.155	Danio_rerio
ENSCLAG00000011241	CMSS1	98	90.393	ENSDNOG00000040418	CMSS1	83	90.393	Dasypus_novemcinctus
ENSCLAG00000011241	CMSS1	98	91.703	ENSDORG00000010461	Cmss1	82	91.703	Dipodomys_ordii
ENSCLAG00000011241	CMSS1	57	50.758	ENSEBUG00000002156	-	96	50.758	Eptatretus_burgeri
ENSCLAG00000011241	CMSS1	98	92.544	ENSEASG00005010966	CMSS1	99	92.237	Equus_asinus_asinus
ENSCLAG00000011241	CMSS1	98	92.576	ENSECAG00000015662	CMSS1	99	92.035	Equus_caballus
ENSCLAG00000011241	CMSS1	98	60.526	ENSEEUG00000007624	-	82	60.526	Erinaceus_europaeus
ENSCLAG00000011241	CMSS1	87	62.871	ENSELUG00000019459	cmss1	75	60.177	Esox_lucius
ENSCLAG00000011241	CMSS1	98	95.197	ENSFCAG00000044577	CMSS1	82	95.197	Felis_catus
ENSCLAG00000011241	CMSS1	100	66.524	ENSFALG00000005816	CMSS1	98	66.524	Ficedula_albicollis
ENSCLAG00000011241	CMSS1	98	93.860	ENSFDAG00000012577	CMSS1	100	93.860	Fukomys_damarensis
ENSCLAG00000011241	CMSS1	97	60.173	ENSFHEG00000012008	cmss1	95	60.173	Fundulus_heteroclitus
ENSCLAG00000011241	CMSS1	94	61.009	ENSGMOG00000016729	cmss1	72	62.000	Gadus_morhua
ENSCLAG00000011241	CMSS1	98	68.996	ENSGALG00000015267	CMSS1	88	68.996	Gallus_gallus
ENSCLAG00000011241	CMSS1	89	63.768	ENSGAFG00000021217	cmss1	76	63.500	Gambusia_affinis
ENSCLAG00000011241	CMSS1	87	56.436	ENSGACG00000002798	cmss1	84	53.191	Gasterosteus_aculeatus
ENSCLAG00000011241	CMSS1	98	72.489	ENSGAGG00000019861	CMSS1	89	72.489	Gopherus_agassizii
ENSCLAG00000011241	CMSS1	98	93.886	ENSGGOG00000014125	CMSS1	88	93.886	Gorilla_gorilla
ENSCLAG00000011241	CMSS1	87	60.891	ENSHBUG00000008431	cmss1	71	60.500	Haplochromis_burtoni
ENSCLAG00000011241	CMSS1	97	94.714	ENSHGLG00000019481	CMSS1	93	94.714	Heterocephalus_glaber_female
ENSCLAG00000011241	CMSS1	97	94.714	ENSHGLG00100010314	CMSS1	91	94.714	Heterocephalus_glaber_male
ENSCLAG00000011241	CMSS1	94	63.927	ENSHCOG00000003222	cmss1	74	63.927	Hippocampus_comes
ENSCLAG00000011241	CMSS1	95	56.109	ENSIPUG00000011591	cmss1	76	56.109	Ictalurus_punctatus
ENSCLAG00000011241	CMSS1	98	93.886	ENSSTOG00000019366	CMSS1	82	93.886	Ictidomys_tridecemlineatus
ENSCLAG00000011241	CMSS1	98	89.520	ENSJJAG00000014894	Cmss1	89	91.500	Jaculus_jaculus
ENSCLAG00000011241	CMSS1	87	54.950	ENSKMAG00000002390	cmss1	80	54.500	Kryptolebias_marmoratus
ENSCLAG00000011241	CMSS1	95	51.667	ENSLBEG00000006298	cmss1	82	57.214	Labrus_bergylta
ENSCLAG00000011241	CMSS1	98	64.348	ENSLACG00000009293	CMSS1	100	64.348	Latimeria_chalumnae
ENSCLAG00000011241	CMSS1	97	56.828	ENSLOCG00000009391	cmss1	80	56.828	Lepisosteus_oculatus
ENSCLAG00000011241	CMSS1	98	90.351	ENSLAFG00000017509	CMSS1	100	90.351	Loxodonta_africana
ENSCLAG00000011241	CMSS1	98	94.323	ENSMFAG00000045006	CMSS1	88	94.323	Macaca_fascicularis
ENSCLAG00000011241	CMSS1	98	93.886	ENSMMUG00000002939	CMSS1	97	93.607	Macaca_mulatta
ENSCLAG00000011241	CMSS1	98	93.886	ENSMNEG00000031315	CMSS1	88	93.886	Macaca_nemestrina
ENSCLAG00000011241	CMSS1	98	93.450	ENSMLEG00000033660	CMSS1	88	93.450	Mandrillus_leucophaeus
ENSCLAG00000011241	CMSS1	87	62.376	ENSMAMG00000017176	cmss1	69	62.000	Mastacembelus_armatus
ENSCLAG00000011241	CMSS1	87	60.891	ENSMZEG00005021886	cmss1	69	60.500	Maylandia_zebra
ENSCLAG00000011241	CMSS1	98	68.421	ENSMGAG00000014360	CMSS1	100	68.421	Meleagris_gallopavo
ENSCLAG00000011241	CMSS1	98	56.332	ENSMAUG00000020609	Cmss1	78	56.332	Mesocricetus_auratus
ENSCLAG00000011241	CMSS1	98	93.450	ENSMICG00000048977	CMSS1	88	93.450	Microcebus_murinus
ENSCLAG00000011241	CMSS1	98	83.843	ENSMOCG00000021937	Cmss1	83	83.843	Microtus_ochrogaster
ENSCLAG00000011241	CMSS1	87	61.386	ENSMMOG00000019794	cmss1	83	61.000	Mola_mola
ENSCLAG00000011241	CMSS1	99	77.826	ENSMODG00000002275	CMSS1	87	77.826	Monodelphis_domestica
ENSCLAG00000011241	CMSS1	97	60.965	ENSMALG00000004250	cmss1	78	60.088	Monopterus_albus
ENSCLAG00000011241	CMSS1	98	84.348	MGP_CAROLIEiJ_G0020824	Cmss1	83	84.348	Mus_caroli
ENSCLAG00000011241	CMSS1	98	85.652	ENSMUSG00000022748	Cmss1	83	85.652	Mus_musculus
ENSCLAG00000011241	CMSS1	98	84.348	MGP_PahariEiJ_G0016524	Cmss1	83	84.348	Mus_pahari
ENSCLAG00000011241	CMSS1	98	85.652	MGP_SPRETEiJ_G0021724	Cmss1	83	85.652	Mus_spretus
ENSCLAG00000011241	CMSS1	98	96.053	ENSMPUG00000011324	CMSS1	88	96.053	Mustela_putorius_furo
ENSCLAG00000011241	CMSS1	98	91.775	ENSMLUG00000001131	CMSS1	88	91.775	Myotis_lucifugus
ENSCLAG00000011241	CMSS1	98	89.083	ENSNGAG00000020316	Cmss1	82	89.083	Nannospalax_galili
ENSCLAG00000011241	CMSS1	87	60.891	ENSNBRG00000003095	cmss1	69	60.500	Neolamprologus_brichardi
ENSCLAG00000011241	CMSS1	98	95.197	ENSNLEG00000034172	CMSS1	88	95.197	Nomascus_leucogenys
ENSCLAG00000011241	CMSS1	98	66.667	ENSMEUG00000014505	CMSS1	100	66.667	Notamacropus_eugenii
ENSCLAG00000011241	CMSS1	98	92.140	ENSOPRG00000002986	CMSS1	82	92.140	Ochotona_princeps
ENSCLAG00000011241	CMSS1	94	82.110	ENSODEG00000009446	-	85	82.110	Octodon_degus
ENSCLAG00000011241	CMSS1	98	92.576	ENSODEG00000005226	-	82	92.576	Octodon_degus
ENSCLAG00000011241	CMSS1	99	89.610	ENSODEG00000003558	-	85	89.610	Octodon_degus
ENSCLAG00000011241	CMSS1	98	80.786	ENSODEG00000001853	-	82	80.786	Octodon_degus
ENSCLAG00000011241	CMSS1	87	60.891	ENSONIG00000006678	cmss1	77	60.500	Oreochromis_niloticus
ENSCLAG00000011241	CMSS1	98	76.419	ENSOANG00000007529	CMSS1	100	74.678	Ornithorhynchus_anatinus
ENSCLAG00000011241	CMSS1	98	90.830	ENSOCUG00000025366	CMSS1	83	90.830	Oryctolagus_cuniculus
ENSCLAG00000011241	CMSS1	98	58.952	ENSORLG00000020340	cmss1	78	59.389	Oryzias_latipes
ENSCLAG00000011241	CMSS1	98	53.712	ENSORLG00020012235	cmss1	85	56.500	Oryzias_latipes_hni
ENSCLAG00000011241	CMSS1	87	55.941	ENSORLG00015015551	cmss1	75	55.500	Oryzias_latipes_hsok
ENSCLAG00000011241	CMSS1	99	59.914	ENSOMEG00000012555	cmss1	69	63.500	Oryzias_melastigma
ENSCLAG00000011241	CMSS1	98	92.105	ENSOGAG00000002045	CMSS1	100	92.105	Otolemur_garnettii
ENSCLAG00000011241	CMSS1	98	92.140	ENSOARG00000017899	CMSS1	79	92.140	Ovis_aries
ENSCLAG00000011241	CMSS1	98	93.886	ENSPPAG00000038515	CMSS1	84	93.886	Pan_paniscus
ENSCLAG00000011241	CMSS1	98	95.197	ENSPPRG00000016767	CMSS1	82	95.197	Panthera_pardus
ENSCLAG00000011241	CMSS1	98	94.760	ENSPTIG00000018274	CMSS1	82	94.760	Panthera_tigris_altaica
ENSCLAG00000011241	CMSS1	98	93.450	ENSPTRG00000015157	CMSS1	93	93.450	Pan_troglodytes
ENSCLAG00000011241	CMSS1	98	93.860	ENSPANG00000019980	CMSS1	91	93.860	Papio_anubis
ENSCLAG00000011241	CMSS1	97	60.870	ENSPKIG00000012609	cmss1	85	61.039	Paramormyrops_kingsleyae
ENSCLAG00000011241	CMSS1	98	72.926	ENSPSIG00000003849	CMSS1	100	72.926	Pelodiscus_sinensis
ENSCLAG00000011241	CMSS1	87	60.591	ENSPMGG00000010286	cmss1	86	60.199	Periophthalmus_magnuspinnatus
ENSCLAG00000011241	CMSS1	98	84.716	ENSPEMG00000016384	Cmss1	82	84.716	Peromyscus_maniculatus_bairdii
ENSCLAG00000011241	CMSS1	88	52.941	ENSPMAG00000001146	cmss1	98	53.000	Petromyzon_marinus
ENSCLAG00000011241	CMSS1	98	77.729	ENSPCIG00000015656	CMSS1	87	77.729	Phascolarctos_cinereus
ENSCLAG00000011241	CMSS1	87	62.871	ENSPFOG00000016849	cmss1	70	62.500	Poecilia_formosa
ENSCLAG00000011241	CMSS1	87	62.376	ENSPLAG00000008323	cmss1	70	62.000	Poecilia_latipinna
ENSCLAG00000011241	CMSS1	87	62.871	ENSPMEG00000021020	cmss1	69	62.500	Poecilia_mexicana
ENSCLAG00000011241	CMSS1	97	58.621	ENSPREG00000007618	cmss1	68	62.000	Poecilia_reticulata
ENSCLAG00000011241	CMSS1	98	93.013	ENSPPYG00000013606	CMSS1	84	93.013	Pongo_abelii
ENSCLAG00000011241	CMSS1	98	94.323	ENSPCOG00000020035	CMSS1	88	94.323	Propithecus_coquereli
ENSCLAG00000011241	CMSS1	98	79.476	ENSPVAG00000017031	CMSS1	82	79.476	Pteropus_vampyrus
ENSCLAG00000011241	CMSS1	76	63.068	ENSPNYG00000013428	cmss1	64	62.644	Pundamilia_nyererei
ENSCLAG00000011241	CMSS1	97	53.247	ENSPNAG00000007912	cmss1	79	54.545	Pygocentrus_nattereri
ENSCLAG00000011241	CMSS1	98	83.913	ENSRNOG00000027888	Cmss1	89	83.913	Rattus_norvegicus
ENSCLAG00000011241	CMSS1	98	93.450	ENSRBIG00000037931	CMSS1	88	93.450	Rhinopithecus_bieti
ENSCLAG00000011241	CMSS1	98	93.450	ENSRROG00000042910	CMSS1	88	93.450	Rhinopithecus_roxellana
ENSCLAG00000011241	CMSS1	98	92.576	ENSSBOG00000030980	CMSS1	87	92.576	Saimiri_boliviensis_boliviensis
ENSCLAG00000011241	CMSS1	99	77.922	ENSSHAG00000009321	CMSS1	91	77.922	Sarcophilus_harrisii
ENSCLAG00000011241	CMSS1	97	61.304	ENSSFOG00015001509	cmss1	80	61.472	Scleropages_formosus
ENSCLAG00000011241	CMSS1	87	63.861	ENSSMAG00000001653	cmss1	69	63.500	Scophthalmus_maximus
ENSCLAG00000011241	CMSS1	97	58.952	ENSSDUG00000007719	cmss1	80	58.515	Seriola_dumerili
ENSCLAG00000011241	CMSS1	89	62.802	ENSSLDG00000012300	cmss1	72	59.538	Seriola_lalandi_dorsalis
ENSCLAG00000011241	CMSS1	98	76.419	ENSSARG00000003584	CMSS1	82	76.419	Sorex_araneus
ENSCLAG00000011241	CMSS1	97	70.796	ENSSPUG00000003865	CMSS1	100	70.796	Sphenodon_punctatus
ENSCLAG00000011241	CMSS1	89	62.802	ENSSPAG00000019182	cmss1	62	63.000	Stegastes_partitus
ENSCLAG00000011241	CMSS1	98	94.323	ENSSSCG00000011970	CMSS1	82	94.323	Sus_scrofa
ENSCLAG00000011241	CMSS1	98	66.812	ENSTGUG00000013635	CMSS1	100	66.812	Taeniopygia_guttata
ENSCLAG00000011241	CMSS1	87	61.386	ENSTRUG00000015265	cmss1	71	61.000	Takifugu_rubripes
ENSCLAG00000011241	CMSS1	87	55.446	ENSTNIG00000002880	cmss1	72	55.000	Tetraodon_nigroviridis
ENSCLAG00000011241	CMSS1	98	69.737	ENSTBEG00000016722	CMSS1	81	69.737	Tupaia_belangeri
ENSCLAG00000011241	CMSS1	98	90.393	ENSTTRG00000001562	CMSS1	82	90.393	Tursiops_truncatus
ENSCLAG00000011241	CMSS1	98	95.197	ENSUAMG00000024209	CMSS1	100	95.067	Ursus_americanus
ENSCLAG00000011241	CMSS1	98	95.197	ENSUMAG00000001983	CMSS1	88	95.197	Ursus_maritimus
ENSCLAG00000011241	CMSS1	98	75.000	ENSVPAG00000000263	CMSS1	82	75.000	Vicugna_pacos
ENSCLAG00000011241	CMSS1	98	93.450	ENSVVUG00000021647	-	93	93.450	Vulpes_vulpes
ENSCLAG00000011241	CMSS1	97	90.708	ENSVVUG00000007776	-	89	90.708	Vulpes_vulpes
ENSCLAG00000011241	CMSS1	97	62.009	ENSXETG00000011858	cmss1	81	62.009	Xenopus_tropicalis
ENSCLAG00000011241	CMSS1	89	62.500	ENSXCOG00000018724	cmss1	68	62.500	Xiphophorus_couchianus
ENSCLAG00000011241	CMSS1	89	62.500	ENSXMAG00000011243	cmss1	75	62.500	Xiphophorus_maculatus