EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000011639 (Gene tree)
Gene ID: 102004040
Gene Symbol: RRP1
Alias: D21S2056E|NNP-1|Nop52|RRP1A
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 10666 bases
Position: chrJH721867.1:41456191-41466856
Accession: 102004040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000016956	Nop52	PF05997.12	3.3e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000017122	RRP1-201	2625	XM_005375882	ENSCLAP00000016956	445 (aa)	XP_005375939	UPI00038F0416

Gene Model

Click here to download ENSCLAG00000011639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000011639's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000011639	RRP1	98	68.376	ENSG00000160214	RRP1	96	90.698	Homo_sapiens
ENSCLAG00000011639	RRP1	83	48.196	ENSG00000160208	RRP1B	55	45.035	Homo_sapiens
ENSCLAG00000011639	RRP1	99	67.538	ENSAMEG00000011448	RRP1	94	70.575	Ailuropoda_melanoleuca
ENSCLAG00000011639	RRP1	62	52.669	ENSACIG00000019121	rrp1	57	52.669	Amphilophus_citrinellus
ENSCLAG00000011639	RRP1	75	50.599	ENSAOCG00000017894	-	75	49.560	Amphiprion_ocellaris
ENSCLAG00000011639	RRP1	70	51.875	ENSAPLG00000004310	RRP1B	51	46.866	Anas_platyrhynchos
ENSCLAG00000011639	RRP1	75	75.652	ENSANAG00000037815	RRP1	76	77.746	Aotus_nancymaae
ENSCLAG00000011639	RRP1	99	42.562	ENSANAG00000034889	RRP1B	55	44.706	Aotus_nancymaae
ENSCLAG00000011639	RRP1	99	64.758	ENSBTAG00000003981	RRP1	94	66.204	Bos_taurus
ENSCLAG00000011639	RRP1	83	45.953	ENSCJAG00000017077	RRP1B	50	46.253	Callithrix_jacchus
ENSCLAG00000011639	RRP1	84	74.419	ENSCJAG00000043205	RRP1	84	71.360	Callithrix_jacchus
ENSCLAG00000011639	RRP1	99	66.740	ENSCAFG00000010646	RRP1	99	63.559	Canis_familiaris
ENSCLAG00000011639	RRP1	83	47.792	ENSCAFG00020018901	RRP1B	52	47.792	Canis_lupus_dingo
ENSCLAG00000011639	RRP1	99	66.740	ENSCAFG00020018979	RRP1	94	68.203	Canis_lupus_dingo
ENSCLAG00000011639	RRP1	80	47.838	ENSCHIG00000021519	RRP1B	50	47.838	Capra_hircus
ENSCLAG00000011639	RRP1	99	64.823	ENSCHIG00000020948	RRP1	94	65.972	Capra_hircus
ENSCLAG00000011639	RRP1	100	67.026	ENSTSYG00000012831	RRP1	99	67.457	Carlito_syrichta
ENSCLAG00000011639	RRP1	72	75.284	ENSCAPG00000008576	RRP1	88	76.989	Cavia_aperea
ENSCLAG00000011639	RRP1	76	47.293	ENSCPOG00000002396	RRP1B	51	45.430	Cavia_porcellus
ENSCLAG00000011639	RRP1	100	80.222	ENSCPOG00000038986	RRP1	100	80.667	Cavia_porcellus
ENSCLAG00000011639	RRP1	83	46.475	ENSCCAG00000029384	RRP1B	63	44.391	Cebus_capucinus
ENSCLAG00000011639	RRP1	92	71.831	ENSCCAG00000029828	RRP1	89	71.831	Cebus_capucinus
ENSCLAG00000011639	RRP1	99	67.904	ENSCATG00000015632	RRP1	98	69.099	Cercocebus_atys
ENSCLAG00000011639	RRP1	83	48.454	ENSCATG00000017423	RRP1B	55	46.226	Cercocebus_atys
ENSCLAG00000011639	RRP1	83	48.454	ENSCSAG00000007961	RRP1B	55	46.226	Chlorocebus_sabaeus
ENSCLAG00000011639	RRP1	72	77.946	ENSCSAG00000007936	RRP1	98	77.946	Chlorocebus_sabaeus
ENSCLAG00000011639	RRP1	74	43.333	ENSCHOG00000002426	-	55	43.333	Choloepus_hoffmanni
ENSCLAG00000011639	RRP1	75	56.851	ENSCPBG00000010310	RRP1B	50	50.990	Chrysemys_picta_bellii
ENSCLAG00000011639	RRP1	74	34.421	ENSCING00000003304	-	73	34.421	Ciona_intestinalis
ENSCLAG00000011639	RRP1	89	62.927	ENSCANG00000042611	RRP1	84	65.544	Colobus_angolensis_palliatus
ENSCLAG00000011639	RRP1	83	48.196	ENSCANG00000040952	RRP1B	55	45.755	Colobus_angolensis_palliatus
ENSCLAG00000011639	RRP1	99	68.584	ENSCGRG00001011920	Rrp1	99	68.584	Cricetulus_griseus_chok1gshd
ENSCLAG00000011639	RRP1	75	48.725	ENSCGRG00001010889	-	54	45.913	Cricetulus_griseus_chok1gshd
ENSCLAG00000011639	RRP1	75	48.851	ENSCGRG00001023882	-	62	66.667	Cricetulus_griseus_chok1gshd
ENSCLAG00000011639	RRP1	65	48.161	ENSCGRG00000001553	Rrp1b	50	44.236	Cricetulus_griseus_crigri
ENSCLAG00000011639	RRP1	99	68.584	ENSCGRG00000008915	Rrp1	99	68.584	Cricetulus_griseus_crigri
ENSCLAG00000011639	RRP1	80	48.219	ENSCSEG00000020711	-	65	50.000	Cynoglossus_semilaevis
ENSCLAG00000011639	RRP1	77	46.724	ENSCVAG00000017568	-	88	46.724	Cyprinodon_variegatus
ENSCLAG00000011639	RRP1	74	48.328	ENSDARG00000103337	rrp1	59	42.548	Danio_rerio
ENSCLAG00000011639	RRP1	99	66.161	ENSDNOG00000019880	RRP1	99	66.161	Dasypus_novemcinctus
ENSCLAG00000011639	RRP1	89	64.461	ENSDORG00000002104	Rrp1	93	67.532	Dipodomys_ordii
ENSCLAG00000011639	RRP1	73	62.848	ENSETEG00000002963	-	73	62.006	Echinops_telfairi
ENSCLAG00000011639	RRP1	98	68.293	ENSEASG00005001673	RRP1	96	69.585	Equus_asinus_asinus
ENSCLAG00000011639	RRP1	98	68.514	ENSECAG00000015703	RRP1	96	70.507	Equus_caballus
ENSCLAG00000011639	RRP1	78	48.011	ENSELUG00000015885	-	97	47.899	Esox_lucius
ENSCLAG00000011639	RRP1	100	68.293	ENSFCAG00000008434	RRP1	99	67.615	Felis_catus
ENSCLAG00000011639	RRP1	80	49.062	ENSFCAG00000010272	RRP1B	50	49.062	Felis_catus
ENSCLAG00000011639	RRP1	62	54.448	ENSFALG00000002024	RRP1B	55	45.897	Ficedula_albicollis
ENSCLAG00000011639	RRP1	100	79.642	ENSFDAG00000013728	RRP1	100	80.089	Fukomys_damarensis
ENSCLAG00000011639	RRP1	85	51.654	ENSGALG00000035696	RRP1B	54	50.238	Gallus_gallus
ENSCLAG00000011639	RRP1	75	48.503	ENSGACG00000001438	rrp1	52	48.503	Gasterosteus_aculeatus
ENSCLAG00000011639	RRP1	76	57.061	ENSGAGG00000000375	RRP1B	53	51.225	Gopherus_agassizii
ENSCLAG00000011639	RRP1	83	46.819	ENSGGOG00000012069	RRP1B	55	45.035	Gorilla_gorilla
ENSCLAG00000011639	RRP1	98	68.094	ENSGGOG00000000173	RRP1	94	70.089	Gorilla_gorilla
ENSCLAG00000011639	RRP1	75	45.977	ENSHBUG00000003766	-	50	45.663	Haplochromis_burtoni
ENSCLAG00000011639	RRP1	79	48.352	ENSHGLG00000004968	RRP1B	53	48.352	Heterocephalus_glaber_female
ENSCLAG00000011639	RRP1	100	79.911	ENSHGLG00000017085	RRP1	96	79.911	Heterocephalus_glaber_female
ENSCLAG00000011639	RRP1	76	43.836	ENSIPUG00000000673	-	68	44.693	Ictalurus_punctatus
ENSCLAG00000011639	RRP1	94	70.492	ENSSTOG00000011116	RRP1	98	70.492	Ictidomys_tridecemlineatus
ENSCLAG00000011639	RRP1	73	50.292	ENSSTOG00000011790	RRP1B	58	45.694	Ictidomys_tridecemlineatus
ENSCLAG00000011639	RRP1	99	70.787	ENSJJAG00000018886	Rrp1	99	70.787	Jaculus_jaculus
ENSCLAG00000011639	RRP1	73	47.041	ENSJJAG00000021279	Rrp1b	52	43.717	Jaculus_jaculus
ENSCLAG00000011639	RRP1	73	48.406	ENSKMAG00000005539	rrp1	51	48.415	Kryptolebias_marmoratus
ENSCLAG00000011639	RRP1	75	45.938	ENSLBEG00000021417	RRP1	94	46.400	Labrus_bergylta
ENSCLAG00000011639	RRP1	83	48.312	ENSLACG00000017332	-	55	45.894	Latimeria_chalumnae
ENSCLAG00000011639	RRP1	74	49.851	ENSLOCG00000004064	-	54	45.408	Lepisosteus_oculatus
ENSCLAG00000011639	RRP1	99	62.637	ENSLAFG00000022901	RRP1	98	63.496	Loxodonta_africana
ENSCLAG00000011639	RRP1	92	48.341	ENSLAFG00000000766	RRP1B	99	48.341	Loxodonta_africana
ENSCLAG00000011639	RRP1	83	48.454	ENSMFAG00000039152	RRP1B	55	46.226	Macaca_fascicularis
ENSCLAG00000011639	RRP1	98	68.455	ENSMFAG00000003202	RRP1	98	68.455	Macaca_fascicularis
ENSCLAG00000011639	RRP1	98	68.455	ENSMMUG00000012304	RRP1	98	68.376	Macaca_mulatta
ENSCLAG00000011639	RRP1	83	48.454	ENSMMUG00000000104	RRP1B	56	46.226	Macaca_mulatta
ENSCLAG00000011639	RRP1	98	68.240	ENSMNEG00000031210	RRP1	98	68.240	Macaca_nemestrina
ENSCLAG00000011639	RRP1	83	48.454	ENSMNEG00000034269	RRP1B	55	46.226	Macaca_nemestrina
ENSCLAG00000011639	RRP1	73	46.802	ENSMLEG00000040044	RRP1B	52	44.474	Mandrillus_leucophaeus
ENSCLAG00000011639	RRP1	90	66.204	ENSMLEG00000037797	RRP1	99	66.898	Mandrillus_leucophaeus
ENSCLAG00000011639	RRP1	76	54.896	ENSMGAG00000014591	RRP1B	54	48.175	Meleagris_gallopavo
ENSCLAG00000011639	RRP1	99	58.352	ENSMAUG00000017653	Rrp1	99	60.089	Mesocricetus_auratus
ENSCLAG00000011639	RRP1	83	46.530	ENSMICG00000004686	RRP1B	57	44.444	Microcebus_murinus
ENSCLAG00000011639	RRP1	99	67.982	ENSMICG00000004700	RRP1	99	67.609	Microcebus_murinus
ENSCLAG00000011639	RRP1	99	55.578	ENSMOCG00000015687	Rrp1	99	58.650	Microtus_ochrogaster
ENSCLAG00000011639	RRP1	75	43.220	ENSMMOG00000019175	rrp1	86	45.322	Mola_mola
ENSCLAG00000011639	RRP1	76	52.011	ENSMODG00000021033	RRP1B	51	49.620	Monodelphis_domestica
ENSCLAG00000011639	RRP1	98	51.592	ENSMODG00000021036	-	59	56.901	Monodelphis_domestica
ENSCLAG00000011639	RRP1	75	48.830	ENSMALG00000010310	rrp1	88	48.830	Monopterus_albus
ENSCLAG00000011639	RRP1	73	48.810	MGP_CAROLIEiJ_G0021376	Rrp1b	53	68.254	Mus_caroli
ENSCLAG00000011639	RRP1	98	60.600	MGP_CAROLIEiJ_G0015508	Rrp1	96	61.845	Mus_caroli
ENSCLAG00000011639	RRP1	98	60.000	ENSMUSG00000061032	Rrp1	96	61.845	Mus_musculus
ENSCLAG00000011639	RRP1	73	50.765	ENSMUSG00000058392	Rrp1b	53	69.841	Mus_musculus
ENSCLAG00000011639	RRP1	76	49.709	MGP_PahariEiJ_G0023695	Rrp1b	60	63.889	Mus_pahari
ENSCLAG00000011639	RRP1	99	60.792	MGP_PahariEiJ_G0030921	Rrp1	98	60.489	Mus_pahari
ENSCLAG00000011639	RRP1	98	59.118	MGP_SPRETEiJ_G0016321	Rrp1	98	59.754	Mus_spretus
ENSCLAG00000011639	RRP1	73	51.488	MGP_SPRETEiJ_G0022290	Rrp1b	53	69.841	Mus_spretus
ENSCLAG00000011639	RRP1	60	49.466	ENSMPUG00000009810	RRP1B	58	43.094	Mustela_putorius_furo
ENSCLAG00000011639	RRP1	87	65.695	ENSMPUG00000009826	RRP1	98	63.333	Mustela_putorius_furo
ENSCLAG00000011639	RRP1	80	86.026	ENSMLUG00000017788	RRP1	95	63.257	Myotis_lucifugus
ENSCLAG00000011639	RRP1	100	48.214	ENSNGAG00000022344	Rrp1	99	53.196	Nannospalax_galili
ENSCLAG00000011639	RRP1	98	67.880	ENSNLEG00000034734	RRP1	98	68.094	Nomascus_leucogenys
ENSCLAG00000011639	RRP1	83	47.074	ENSNLEG00000001490	RRP1B	57	45.035	Nomascus_leucogenys
ENSCLAG00000011639	RRP1	61	68.333	ENSMEUG00000003226	-	52	68.333	Notamacropus_eugenii
ENSCLAG00000011639	RRP1	80	67.507	ENSOPRG00000001319	RRP1	100	68.347	Ochotona_princeps
ENSCLAG00000011639	RRP1	67	49.832	ENSONIG00000004264	rrp1	50	44.875	Oreochromis_niloticus
ENSCLAG00000011639	RRP1	74	51.032	ENSOANG00000006470	RRP1B	52	46.482	Ornithorhynchus_anatinus
ENSCLAG00000011639	RRP1	73	61.162	ENSOANG00000006472	-	100	53.600	Ornithorhynchus_anatinus
ENSCLAG00000011639	RRP1	73	80.263	ENSOCUG00000022843	-	77	80.263	Oryctolagus_cuniculus
ENSCLAG00000011639	RRP1	99	67.544	ENSOGAG00000006105	RRP1	99	68.202	Otolemur_garnettii
ENSCLAG00000011639	RRP1	78	51.143	ENSOGAG00000009872	RRP1B	62	47.317	Otolemur_garnettii
ENSCLAG00000011639	RRP1	99	61.842	ENSOARG00000011434	RRP1	94	60.938	Ovis_aries
ENSCLAG00000011639	RRP1	98	68.590	ENSPPAG00000029050	RRP1	99	68.803	Pan_paniscus
ENSCLAG00000011639	RRP1	89	40.492	ENSPPAG00000035319	RRP1B	52	42.967	Pan_paniscus
ENSCLAG00000011639	RRP1	100	66.958	ENSPPRG00000010656	RRP1	99	67.615	Panthera_pardus
ENSCLAG00000011639	RRP1	80	49.333	ENSPPRG00000010356	RRP1B	56	46.462	Panthera_pardus
ENSCLAG00000011639	RRP1	83	61.458	ENSPTIG00000019473	RRP1	87	61.299	Panthera_tigris_altaica
ENSCLAG00000011639	RRP1	70	47.432	ENSPTIG00000016894	RRP1B	61	44.474	Panthera_tigris_altaica
ENSCLAG00000011639	RRP1	83	46.819	ENSPTRG00000013958	RRP1B	55	45.035	Pan_troglodytes
ENSCLAG00000011639	RRP1	98	68.376	ENSPTRG00000013962	RRP1	99	68.590	Pan_troglodytes
ENSCLAG00000011639	RRP1	83	48.454	ENSPANG00000011090	RRP1B	55	46.604	Papio_anubis
ENSCLAG00000011639	RRP1	91	70.773	ENSPANG00000015097	RRP1	98	68.308	Papio_anubis
ENSCLAG00000011639	RRP1	82	41.710	ENSPKIG00000003422	-	54	39.246	Paramormyrops_kingsleyae
ENSCLAG00000011639	RRP1	78	55.249	ENSPSIG00000008152	RRP1B	51	50.483	Pelodiscus_sinensis
ENSCLAG00000011639	RRP1	75	40.634	ENSPMGG00000007512	-	84	41.210	Periophthalmus_magnuspinnatus
ENSCLAG00000011639	RRP1	76	48.696	ENSPEMG00000022490	Rrp1b	52	45.865	Peromyscus_maniculatus_bairdii
ENSCLAG00000011639	RRP1	99	68.722	ENSPEMG00000018421	Rrp1	99	70.330	Peromyscus_maniculatus_bairdii
ENSCLAG00000011639	RRP1	77	60.399	ENSPCIG00000015523	-	76	60.399	Phascolarctos_cinereus
ENSCLAG00000011639	RRP1	84	48.586	ENSPCIG00000015513	RRP1B	59	46.838	Phascolarctos_cinereus
ENSCLAG00000011639	RRP1	88	44.175	ENSPFOG00000007424	-	51	46.437	Poecilia_formosa
ENSCLAG00000011639	RRP1	83	46.819	ENSPPYG00000011470	RRP1B	55	45.035	Pongo_abelii
ENSCLAG00000011639	RRP1	98	66.667	ENSPPYG00000011474	RRP1	99	67.521	Pongo_abelii
ENSCLAG00000011639	RRP1	80	53.239	ENSPCAG00000008370	-	100	51.892	Procavia_capensis
ENSCLAG00000011639	RRP1	83	47.815	ENSPCOG00000017927	RRP1B	57	45.626	Propithecus_coquereli
ENSCLAG00000011639	RRP1	99	65.502	ENSPCOG00000017706	RRP1	99	66.520	Propithecus_coquereli
ENSCLAG00000011639	RRP1	63	59.310	ENSPVAG00000009925	-	63	59.310	Pteropus_vampyrus
ENSCLAG00000011639	RRP1	76	49.275	ENSRNOG00000001194	Rrp1b	50	47.185	Rattus_norvegicus
ENSCLAG00000011639	RRP1	99	66.592	ENSRNOG00000001203	Rrp1	98	69.794	Rattus_norvegicus
ENSCLAG00000011639	RRP1	98	66.173	ENSRBIG00000032082	RRP1	98	68.884	Rhinopithecus_bieti
ENSCLAG00000011639	RRP1	83	42.010	ENSRBIG00000041689	RRP1B	54	40.515	Rhinopithecus_bieti
ENSCLAG00000011639	RRP1	98	67.097	ENSRROG00000039799	RRP1	98	68.884	Rhinopithecus_roxellana
ENSCLAG00000011639	RRP1	83	48.454	ENSRROG00000031499	RRP1B	60	45.991	Rhinopithecus_roxellana
ENSCLAG00000011639	RRP1	73	43.288	ENSSBOG00000034727	RRP1B	54	41.337	Saimiri_boliviensis_boliviensis
ENSCLAG00000011639	RRP1	92	74.510	ENSSBOG00000034689	RRP1	95	72.326	Saimiri_boliviensis_boliviensis
ENSCLAG00000011639	RRP1	70	56.966	ENSSHAG00000010304	-	96	57.500	Sarcophilus_harrisii
ENSCLAG00000011639	RRP1	76	50.852	ENSSHAG00000017789	RRP1B	55	45.902	Sarcophilus_harrisii
ENSCLAG00000011639	RRP1	68	46.224	ENSSFOG00015003932	-	51	45.045	Scleropages_formosus
ENSCLAG00000011639	RRP1	75	48.442	ENSSMAG00000016847	-	80	48.466	Scophthalmus_maximus
ENSCLAG00000011639	RRP1	76	52.841	ENSSPUG00000002834	RRP1B	53	49.048	Sphenodon_punctatus
ENSCLAG00000011639	RRP1	80	51.070	ENSSSCG00000021698	RRP1B	56	51.070	Sus_scrofa
ENSCLAG00000011639	RRP1	85	71.026	ENSSSCG00000037061	RRP1	94	69.655	Sus_scrofa
ENSCLAG00000011639	RRP1	67	52.769	ENSTGUG00000005926	RRP1B	52	47.467	Taeniopygia_guttata
ENSCLAG00000011639	RRP1	75	47.953	ENSTRUG00000017592	rrp1	97	47.953	Takifugu_rubripes
ENSCLAG00000011639	RRP1	97	42.664	ENSTNIG00000005053	rrp1	54	50.296	Tetraodon_nigroviridis
ENSCLAG00000011639	RRP1	73	46.291	ENSTBEG00000000422	RRP1B	58	46.450	Tupaia_belangeri
ENSCLAG00000011639	RRP1	71	76.510	ENSTBEG00000001260	-	57	76.510	Tupaia_belangeri
ENSCLAG00000011639	RRP1	97	42.794	ENSTTRG00000000723	RRP1B	59	43.736	Tursiops_truncatus
ENSCLAG00000011639	RRP1	72	73.529	ENSTTRG00000011162	RRP1	83	73.529	Tursiops_truncatus
ENSCLAG00000011639	RRP1	96	44.912	ENSUAMG00000026765	RRP1B	62	45.833	Ursus_americanus
ENSCLAG00000011639	RRP1	72	62.162	ENSUAMG00000014189	-	88	65.461	Ursus_americanus
ENSCLAG00000011639	RRP1	84	42.543	ENSUMAG00000025510	RRP1B	73	42.752	Ursus_maritimus
ENSCLAG00000011639	RRP1	90	66.586	ENSUMAG00000025507	RRP1	91	68.785	Ursus_maritimus
ENSCLAG00000011639	RRP1	68	58.204	ENSVVUG00000024498	-	78	57.012	Vulpes_vulpes