EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000011770 (Gene tree)
Gene ID: 102009742
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 31801 bases
Position: chrJH721889.1:20581457-20613257
Accession: 102009742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000017142	PRP4	PF08799.11	9e-14	1	1
ENSCLAP00000017143	PRP4	PF08799.11	9.6e-14	1	1
ENSCLAP00000017142	Prp18	PF02840.15	4.8e-63	1	1
ENSCLAP00000017143	Prp18	PF02840.15	5.4e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000017311	-	3245	XM_005387160	ENSCLAP00000017142	342 (aa)	XP_005387217	UPI00038EF1F2
ENSCLAT00000017312	-	1056	XM_013515516	ENSCLAP00000017143	351 (aa)	XP_013370970	UPI000697377A

Gene Model

Click here to download ENSCLAG00000011770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000011770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000011770	-	100	99.123	ENSG00000165630	PRPF18	100	99.123	Homo_sapiens
ENSCLAG00000011770	-	100	85.088	ENSAPOG00000024177	prpf18	100	85.088	Acanthochromis_polyacanthus
ENSCLAG00000011770	-	100	99.123	ENSAMEG00000013591	-	100	99.123	Ailuropoda_melanoleuca
ENSCLAG00000011770	-	100	84.211	ENSACIG00000001186	prpf18	100	84.211	Amphilophus_citrinellus
ENSCLAG00000011770	-	98	85.075	ENSAOCG00000006572	prpf18	94	83.382	Amphiprion_ocellaris
ENSCLAG00000011770	-	100	85.380	ENSAPEG00000004564	prpf18	100	85.380	Amphiprion_percula
ENSCLAG00000011770	-	100	83.918	ENSATEG00000000303	prpf18	100	83.918	Anabas_testudineus
ENSCLAG00000011770	-	99	91.176	ENSAPLG00000003387	-	99	91.176	Anas_platyrhynchos
ENSCLAG00000011770	-	100	91.279	ENSACAG00000000818	-	100	91.279	Anolis_carolinensis
ENSCLAG00000011770	-	100	98.538	ENSANAG00000037445	-	100	98.538	Aotus_nancymaae
ENSCLAG00000011770	-	100	84.503	ENSACLG00000026296	prpf18	100	84.503	Astatotilapia_calliptera
ENSCLAG00000011770	-	100	84.046	ENSAMXG00000012848	prpf18	100	84.046	Astyanax_mexicanus
ENSCLAG00000011770	-	100	98.830	ENSBTAG00000017244	PRPF18	100	98.830	Bos_taurus
ENSCLAG00000011770	-	98	38.682	WBGene00009320	F32B6.3	97	38.682	Caenorhabditis_elegans
ENSCLAG00000011770	-	100	98.538	ENSCJAG00000009432	-	100	98.538	Callithrix_jacchus
ENSCLAG00000011770	-	100	99.123	ENSCAFG00000004735	-	100	99.123	Canis_familiaris
ENSCLAG00000011770	-	100	99.123	ENSCAFG00020007712	-	100	99.123	Canis_lupus_dingo
ENSCLAG00000011770	-	100	98.830	ENSCHIG00000000499	-	100	98.830	Capra_hircus
ENSCLAG00000011770	-	100	98.246	ENSTSYG00000003517	-	100	98.246	Carlito_syrichta
ENSCLAG00000011770	-	100	99.145	ENSCPOG00000021069	-	100	99.145	Cavia_porcellus
ENSCLAG00000011770	-	100	98.538	ENSCCAG00000036822	-	100	98.538	Cebus_capucinus
ENSCLAG00000011770	-	100	88.012	ENSCATG00000016633	-	100	88.012	Cercocebus_atys
ENSCLAG00000011770	-	100	98.860	ENSCSAG00000013109	-	100	98.860	Chlorocebus_sabaeus
ENSCLAG00000011770	-	100	88.764	ENSCPBG00000003100	-	100	89.326	Chrysemys_picta_bellii
ENSCLAG00000011770	-	99	54.412	ENSCING00000020481	-	97	54.412	Ciona_intestinalis
ENSCLAG00000011770	-	99	54.360	ENSCSAVG00000010546	-	99	54.070	Ciona_savignyi
ENSCLAG00000011770	-	100	98.830	ENSCANG00000034900	-	100	98.830	Colobus_angolensis_palliatus
ENSCLAG00000011770	-	100	98.830	ENSCGRG00001023665	Prpf18	100	98.830	Cricetulus_griseus_chok1gshd
ENSCLAG00000011770	-	100	98.830	ENSCGRG00000014690	Prpf18	100	98.830	Cricetulus_griseus_crigri
ENSCLAG00000011770	-	100	82.749	ENSCSEG00000005536	prpf18	99	82.749	Cynoglossus_semilaevis
ENSCLAG00000011770	-	100	83.918	ENSCVAG00000012401	prpf18	100	83.918	Cyprinodon_variegatus
ENSCLAG00000011770	-	100	85.088	ENSDARG00000058306	prpf18	100	85.088	Danio_rerio
ENSCLAG00000011770	-	100	98.538	ENSDNOG00000035607	-	100	98.538	Dasypus_novemcinctus
ENSCLAG00000011770	-	100	98.830	ENSDORG00000000858	Prpf18	100	98.830	Dipodomys_ordii
ENSCLAG00000011770	-	99	51.032	FBgn0027784	Prp18	98	50.737	Drosophila_melanogaster
ENSCLAG00000011770	-	100	86.842	ENSETEG00000015060	-	100	86.842	Echinops_telfairi
ENSCLAG00000011770	-	100	66.571	ENSEBUG00000016502	prpf18	99	65.706	Eptatretus_burgeri
ENSCLAG00000011770	-	100	98.830	ENSEASG00005019373	-	100	98.830	Equus_asinus_asinus
ENSCLAG00000011770	-	100	98.830	ENSECAG00000006997	PRPF18	100	98.830	Equus_caballus
ENSCLAG00000011770	-	92	63.291	ENSEEUG00000001171	-	100	63.291	Erinaceus_europaeus
ENSCLAG00000011770	-	100	82.216	ENSELUG00000022190	prpf18	100	82.216	Esox_lucius
ENSCLAG00000011770	-	100	98.830	ENSFCAG00000004436	-	100	98.830	Felis_catus
ENSCLAG00000011770	-	93	90.462	ENSFALG00000001912	-	97	90.462	Ficedula_albicollis
ENSCLAG00000011770	-	94	98.750	ENSFDAG00000014026	-	100	98.750	Fukomys_damarensis
ENSCLAG00000011770	-	99	64.348	ENSFDAG00000010713	-	97	64.348	Fukomys_damarensis
ENSCLAG00000011770	-	80	89.377	ENSFHEG00000020125	prpf18	98	89.513	Fundulus_heteroclitus
ENSCLAG00000011770	-	99	80.059	ENSGMOG00000012210	prpf18	99	80.059	Gadus_morhua
ENSCLAG00000011770	-	100	91.813	ENSGALG00000043593	-	100	91.813	Gallus_gallus
ENSCLAG00000011770	-	100	83.041	ENSGAFG00000006034	prpf18	100	83.041	Gambusia_affinis
ENSCLAG00000011770	-	100	81.579	ENSGACG00000012232	prpf18	100	81.579	Gasterosteus_aculeatus
ENSCLAG00000011770	-	100	92.105	ENSGAGG00000016878	-	100	92.105	Gopherus_agassizii
ENSCLAG00000011770	-	93	98.769	ENSGGOG00000025188	-	96	99.051	Gorilla_gorilla
ENSCLAG00000011770	-	100	84.503	ENSHBUG00000010264	prpf18	100	84.503	Haplochromis_burtoni
ENSCLAG00000011770	-	100	99.123	ENSHGLG00000018534	PRPF18	100	99.123	Heterocephalus_glaber_female
ENSCLAG00000011770	-	94	99.062	ENSHGLG00100012161	-	98	99.062	Heterocephalus_glaber_male
ENSCLAG00000011770	-	100	83.918	ENSHCOG00000015987	prpf18	100	83.918	Hippocampus_comes
ENSCLAG00000011770	-	100	81.870	ENSIPUG00000007432	prpf18	100	82.720	Ictalurus_punctatus
ENSCLAG00000011770	-	100	97.436	ENSSTOG00000008735	-	100	97.436	Ictidomys_tridecemlineatus
ENSCLAG00000011770	-	100	99.123	ENSJJAG00000024041	-	100	99.123	Jaculus_jaculus
ENSCLAG00000011770	-	100	71.758	ENSJJAG00000015191	-	100	71.758	Jaculus_jaculus
ENSCLAG00000011770	-	100	82.749	ENSKMAG00000012124	prpf18	100	82.749	Kryptolebias_marmoratus
ENSCLAG00000011770	-	99	83.432	ENSLBEG00000028466	prpf18	99	83.432	Labrus_bergylta
ENSCLAG00000011770	-	100	86.257	ENSLACG00000009885	prpf18	100	86.257	Latimeria_chalumnae
ENSCLAG00000011770	-	100	90.058	ENSLOCG00000016736	prpf18	100	90.058	Lepisosteus_oculatus
ENSCLAG00000011770	-	100	99.123	ENSLAFG00000007753	-	100	99.123	Loxodonta_africana
ENSCLAG00000011770	-	100	99.123	ENSMFAG00000000540	-	100	99.123	Macaca_fascicularis
ENSCLAG00000011770	-	100	99.123	ENSMMUG00000015071	PRPF18	100	99.123	Macaca_mulatta
ENSCLAG00000011770	-	100	99.123	ENSMNEG00000024679	-	100	99.123	Macaca_nemestrina
ENSCLAG00000011770	-	100	83.918	ENSMLEG00000031715	-	100	83.918	Mandrillus_leucophaeus
ENSCLAG00000011770	-	100	83.041	ENSMAMG00000006610	prpf18	100	83.041	Mastacembelus_armatus
ENSCLAG00000011770	-	100	84.503	ENSMZEG00005019392	prpf18	100	84.503	Maylandia_zebra
ENSCLAG00000011770	-	100	91.813	ENSMGAG00000005023	-	100	91.813	Meleagris_gallopavo
ENSCLAG00000011770	-	100	98.830	ENSMICG00000006572	-	100	98.830	Microcebus_murinus
ENSCLAG00000011770	-	100	99.123	ENSMOCG00000021468	Prpf18	100	99.123	Microtus_ochrogaster
ENSCLAG00000011770	-	100	83.041	ENSMMOG00000013012	prpf18	100	83.041	Mola_mola
ENSCLAG00000011770	-	100	85.380	ENSMODG00000024043	-	100	85.380	Monodelphis_domestica
ENSCLAG00000011770	-	96	92.308	ENSMODG00000016902	-	92	92.308	Monodelphis_domestica
ENSCLAG00000011770	-	100	77.714	ENSMALG00000005486	prpf18	100	78.000	Monopterus_albus
ENSCLAG00000011770	-	100	98.538	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSCLAG00000011770	-	100	98.246	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSCLAG00000011770	-	100	98.830	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSCLAG00000011770	-	100	97.953	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSCLAG00000011770	-	100	98.830	ENSMPUG00000000938	-	100	98.830	Mustela_putorius_furo
ENSCLAG00000011770	-	100	98.246	ENSMLUG00000009200	-	100	98.246	Myotis_lucifugus
ENSCLAG00000011770	-	67	92.174	ENSNGAG00000023550	-	82	92.174	Nannospalax_galili
ENSCLAG00000011770	-	100	98.538	ENSNGAG00000012500	-	100	98.538	Nannospalax_galili
ENSCLAG00000011770	-	100	84.503	ENSNBRG00000001778	prpf18	100	84.503	Neolamprologus_brichardi
ENSCLAG00000011770	-	100	99.123	ENSNLEG00000012186	-	100	99.123	Nomascus_leucogenys
ENSCLAG00000011770	-	100	65.205	ENSMEUG00000005032	-	100	65.205	Notamacropus_eugenii
ENSCLAG00000011770	-	77	80.377	ENSOPRG00000002153	-	100	80.377	Ochotona_princeps
ENSCLAG00000011770	-	100	98.246	ENSODEG00000003770	-	100	98.246	Octodon_degus
ENSCLAG00000011770	-	98	83.881	ENSONIG00000014854	prpf18	96	83.881	Oreochromis_niloticus
ENSCLAG00000011770	-	100	95.029	ENSOANG00000015404	-	100	95.029	Ornithorhynchus_anatinus
ENSCLAG00000011770	-	100	99.415	ENSOCUG00000027756	-	100	94.737	Oryctolagus_cuniculus
ENSCLAG00000011770	-	100	82.336	ENSORLG00000010293	prpf18	100	82.336	Oryzias_latipes
ENSCLAG00000011770	-	100	83.918	ENSORLG00020001530	prpf18	100	83.918	Oryzias_latipes_hni
ENSCLAG00000011770	-	100	84.211	ENSORLG00015013705	prpf18	100	84.211	Oryzias_latipes_hsok
ENSCLAG00000011770	-	100	85.088	ENSOMEG00000009167	prpf18	100	85.088	Oryzias_melastigma
ENSCLAG00000011770	-	100	98.538	ENSOGAG00000007294	-	100	98.538	Otolemur_garnettii
ENSCLAG00000011770	-	100	98.575	ENSOARG00000006243	-	100	98.575	Ovis_aries
ENSCLAG00000011770	-	100	99.123	ENSPPAG00000041959	-	100	99.123	Pan_paniscus
ENSCLAG00000011770	-	100	98.830	ENSPPRG00000000107	-	100	98.830	Panthera_pardus
ENSCLAG00000011770	-	100	98.538	ENSPTIG00000021094	-	100	98.538	Panthera_tigris_altaica
ENSCLAG00000011770	-	100	99.123	ENSPTRG00000002306	PRPF18	100	99.123	Pan_troglodytes
ENSCLAG00000011770	-	100	98.830	ENSPANG00000023346	-	100	98.830	Papio_anubis
ENSCLAG00000011770	-	86	98.113	ENSPKIG00000014128	prpf18	96	82.621	Paramormyrops_kingsleyae
ENSCLAG00000011770	-	100	92.398	ENSPSIG00000016064	-	100	92.398	Pelodiscus_sinensis
ENSCLAG00000011770	-	100	78.363	ENSPMGG00000016486	prpf18	100	78.363	Periophthalmus_magnuspinnatus
ENSCLAG00000011770	-	100	98.830	ENSPEMG00000013704	Prpf18	100	98.830	Peromyscus_maniculatus_bairdii
ENSCLAG00000011770	-	100	73.988	ENSPMAG00000000204	prpf18	100	73.988	Petromyzon_marinus
ENSCLAG00000011770	-	93	95.692	ENSPCIG00000012963	-	99	96.203	Phascolarctos_cinereus
ENSCLAG00000011770	-	100	81.766	ENSPFOG00000017611	prpf18	100	81.766	Poecilia_formosa
ENSCLAG00000011770	-	100	83.333	ENSPLAG00000000369	prpf18	100	83.333	Poecilia_latipinna
ENSCLAG00000011770	-	100	83.333	ENSPMEG00000005183	prpf18	100	83.333	Poecilia_mexicana
ENSCLAG00000011770	-	100	82.749	ENSPREG00000015232	prpf18	100	82.749	Poecilia_reticulata
ENSCLAG00000011770	-	100	98.830	ENSPPYG00000002101	PRPF18	100	98.830	Pongo_abelii
ENSCLAG00000011770	-	100	80.117	ENSPCAG00000010833	-	100	80.117	Procavia_capensis
ENSCLAG00000011770	-	100	91.520	ENSPCOG00000013057	-	100	91.520	Propithecus_coquereli
ENSCLAG00000011770	-	100	60.526	ENSPVAG00000002947	-	100	60.526	Pteropus_vampyrus
ENSCLAG00000011770	-	100	84.503	ENSPNYG00000003554	prpf18	100	84.503	Pundamilia_nyererei
ENSCLAG00000011770	-	100	85.470	ENSPNAG00000023151	prpf18	100	85.470	Pygocentrus_nattereri
ENSCLAG00000011770	-	100	98.246	ENSRNOG00000018396	Prpf18	100	98.246	Rattus_norvegicus
ENSCLAG00000011770	-	100	98.538	ENSRBIG00000028028	-	100	98.538	Rhinopithecus_bieti
ENSCLAG00000011770	-	100	98.830	ENSRROG00000040695	-	100	98.830	Rhinopithecus_roxellana
ENSCLAG00000011770	-	100	98.538	ENSSBOG00000034482	-	100	98.538	Saimiri_boliviensis_boliviensis
ENSCLAG00000011770	-	100	76.901	ENSSHAG00000009669	-	100	76.901	Sarcophilus_harrisii
ENSCLAG00000011770	-	100	96.199	ENSSHAG00000016463	-	100	96.199	Sarcophilus_harrisii
ENSCLAG00000011770	-	98	82.319	ENSSFOG00015022118	prpf18	100	76.657	Scleropages_formosus
ENSCLAG00000011770	-	77	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSCLAG00000011770	-	100	82.749	ENSSMAG00000005308	prpf18	100	82.749	Scophthalmus_maximus
ENSCLAG00000011770	-	100	84.795	ENSSDUG00000015428	prpf18	100	84.795	Seriola_dumerili
ENSCLAG00000011770	-	100	84.795	ENSSLDG00000023989	prpf18	100	84.795	Seriola_lalandi_dorsalis
ENSCLAG00000011770	-	100	68.713	ENSSARG00000005307	-	100	68.713	Sorex_araneus
ENSCLAG00000011770	-	100	92.105	ENSSPUG00000002619	-	100	92.105	Sphenodon_punctatus
ENSCLAG00000011770	-	100	84.211	ENSSPAG00000019502	prpf18	100	84.211	Stegastes_partitus
ENSCLAG00000011770	-	100	99.123	ENSSSCG00000026354	-	100	99.123	Sus_scrofa
ENSCLAG00000011770	-	100	91.813	ENSTGUG00000002286	-	100	91.813	Taeniopygia_guttata
ENSCLAG00000011770	-	100	82.164	ENSTRUG00000011278	prpf18	100	82.164	Takifugu_rubripes
ENSCLAG00000011770	-	100	81.871	ENSTNIG00000000911	prpf18	100	81.871	Tetraodon_nigroviridis
ENSCLAG00000011770	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSCLAG00000011770	-	100	98.830	ENSTTRG00000011117	PRPF18	100	98.830	Tursiops_truncatus
ENSCLAG00000011770	-	95	95.692	ENSUAMG00000001815	-	94	95.692	Ursus_americanus
ENSCLAG00000011770	-	100	94.152	ENSUMAG00000012329	-	100	94.152	Ursus_maritimus
ENSCLAG00000011770	-	100	92.982	ENSVPAG00000011486	-	100	92.982	Vicugna_pacos
ENSCLAG00000011770	-	100	99.123	ENSVVUG00000005453	-	100	99.123	Vulpes_vulpes
ENSCLAG00000011770	-	100	80.290	ENSXETG00000024057	prpf18	100	80.290	Xenopus_tropicalis
ENSCLAG00000011770	-	100	82.558	ENSXCOG00000020414	prpf18	100	82.558	Xiphophorus_couchianus
ENSCLAG00000011770	-	100	83.041	ENSXMAG00000004713	prpf18	91	83.041	Xiphophorus_maculatus