EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCLAG00000011886 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 2667 bases
Position: chrJH721879.1:14296072-14298738
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000017312	DND1_DSRM	PF14709.7	9.1e-28	1	1
ENSCLAP00000017312	RRM_1	PF00076.22	2.2e-36	1	3
ENSCLAP00000017312	RRM_1	PF00076.22	2.2e-36	2	3
ENSCLAP00000017312	RRM_1	PF00076.22	2.2e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000017481	-	1557	-	ENSCLAP00000017312	518 (aa)	-	-

Gene Model

Click here to download ENSCLAG00000011886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000011886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCLAG00000011886	-	99	90.927	ENSCLAG00000005846	-	99	94.979
ENSCLAG00000011886	-	58	73.579	ENSCLAG00000001684	RBM47	83	77.099
ENSCLAG00000011886	-	57	54.000	ENSCLAG00000011851	SYNCRIP	53	53.333
ENSCLAG00000011886	-	86	72.910	ENSCLAG00000010424	A1CF	85	72.910

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000011886	-	99	90.927	ENSG00000151962	RBM46	100	96.241	Homo_sapiens
ENSCLAG00000011886	-	88	65.376	ENSAPOG00000009209	rbm46	90	65.376	Acanthochromis_polyacanthus
ENSCLAG00000011886	-	99	91.699	ENSAMEG00000013290	RBM46	97	91.699	Ailuropoda_melanoleuca
ENSCLAG00000011886	-	90	59.454	ENSACIG00000014500	rbm46	91	59.664	Amphilophus_citrinellus
ENSCLAG00000011886	-	86	65.843	ENSAOCG00000001892	-	86	65.843	Amphiprion_ocellaris
ENSCLAG00000011886	-	86	65.843	ENSAPEG00000017762	rbm46	96	65.843	Amphiprion_percula
ENSCLAG00000011886	-	87	65.044	ENSATEG00000010775	rbm46	93	61.212	Anabas_testudineus
ENSCLAG00000011886	-	90	84.797	ENSAPLG00000005116	RBM46	100	84.797	Anas_platyrhynchos
ENSCLAG00000011886	-	99	84.690	ENSACAG00000015599	RBM46	97	84.690	Anolis_carolinensis
ENSCLAG00000011886	-	99	89.575	ENSANAG00000029193	RBM46	99	93.790	Aotus_nancymaae
ENSCLAG00000011886	-	97	58.679	ENSACLG00000016153	rbm46	93	59.429	Astatotilapia_calliptera
ENSCLAG00000011886	-	87	67.333	ENSAMXG00000009397	rbm46	98	67.333	Astyanax_mexicanus
ENSCLAG00000011886	-	95	60.392	ENSAMXG00000020892	-	96	60.392	Astyanax_mexicanus
ENSCLAG00000011886	-	99	90.347	ENSBTAG00000001696	RBM46	99	93.724	Bos_taurus
ENSCLAG00000011886	-	99	90.643	ENSCJAG00000001768	RBM46	99	93.790	Callithrix_jacchus
ENSCLAG00000011886	-	99	91.699	ENSCAFG00000008473	RBM46	99	95.188	Canis_familiaris
ENSCLAG00000011886	-	99	91.699	ENSCAFG00020002468	RBM46	95	95.085	Canis_lupus_dingo
ENSCLAG00000011886	-	99	90.347	ENSCHIG00000000502	RBM46	99	93.724	Capra_hircus
ENSCLAG00000011886	-	92	93.515	ENSTSYG00000010435	RBM46	99	93.790	Carlito_syrichta
ENSCLAG00000011886	-	92	94.351	ENSCAPG00000011928	-	99	94.351	Cavia_aperea
ENSCLAG00000011886	-	71	93.496	ENSCAPG00000011841	-	99	93.496	Cavia_aperea
ENSCLAG00000011886	-	99	87.380	ENSCPOG00000019272	-	97	87.380	Cavia_porcellus
ENSCLAG00000011886	-	99	90.751	ENSCPOG00000010284	-	99	94.433	Cavia_porcellus
ENSCLAG00000011886	-	98	91.732	ENSCPOG00000020396	-	99	91.732	Cavia_porcellus
ENSCLAG00000011886	-	99	91.120	ENSCCAG00000027619	-	99	94.979	Cebus_capucinus
ENSCLAG00000011886	-	99	78.278	ENSCCAG00000001323	-	99	78.947	Cebus_capucinus
ENSCLAG00000011886	-	92	94.351	ENSCATG00000040148	RBM46	99	94.351	Cercocebus_atys
ENSCLAG00000011886	-	99	91.506	ENSCSAG00000003263	RBM46	97	91.506	Chlorocebus_sabaeus
ENSCLAG00000011886	-	99	89.768	ENSCHOG00000003429	RBM46	97	90.154	Choloepus_hoffmanni
ENSCLAG00000011886	-	86	90.562	ENSCPBG00000009314	RBM46	97	90.562	Chrysemys_picta_bellii
ENSCLAG00000011886	-	92	93.737	ENSCANG00000039065	RBM46	99	94.004	Colobus_angolensis_palliatus
ENSCLAG00000011886	-	99	91.313	ENSCGRG00001016714	Rbm46	99	94.433	Cricetulus_griseus_chok1gshd
ENSCLAG00000011886	-	99	91.313	ENSCGRG00000011738	Rbm46	99	94.433	Cricetulus_griseus_crigri
ENSCLAG00000011886	-	86	58.837	ENSCSEG00000005530	rbm46	96	58.837	Cynoglossus_semilaevis
ENSCLAG00000011886	-	93	61.983	ENSCVAG00000021013	rbm46	98	61.983	Cyprinodon_variegatus
ENSCLAG00000011886	-	97	63.654	ENSDARG00000079452	rbm46	96	64.215	Danio_rerio
ENSCLAG00000011886	-	99	91.313	ENSDNOG00000016195	RBM46	97	91.313	Dasypus_novemcinctus
ENSCLAG00000011886	-	99	91.506	ENSDORG00000006405	Rbm46	99	94.861	Dipodomys_ordii
ENSCLAG00000011886	-	99	88.803	ENSETEG00000014902	RBM46	97	88.803	Echinops_telfairi
ENSCLAG00000011886	-	99	89.961	ENSEASG00005015821	RBM46	97	89.961	Equus_asinus_asinus
ENSCLAG00000011886	-	92	93.305	ENSECAG00000007649	RBM46	99	93.305	Equus_caballus
ENSCLAG00000011886	-	99	87.645	ENSEEUG00000011824	RBM46	97	87.645	Erinaceus_europaeus
ENSCLAG00000011886	-	71	71.505	ENSELUG00000008166	rbm46	94	71.505	Esox_lucius
ENSCLAG00000011886	-	99	91.313	ENSFCAG00000029812	RBM46	99	94.647	Felis_catus
ENSCLAG00000011886	-	93	81.109	ENSFALG00000013157	RBM46	96	81.109	Ficedula_albicollis
ENSCLAG00000011886	-	98	88.824	ENSFDAG00000006445	-	97	88.824	Fukomys_damarensis
ENSCLAG00000011886	-	99	88.224	ENSFDAG00000019281	-	97	88.224	Fukomys_damarensis
ENSCLAG00000011886	-	84	57.859	ENSFHEG00000013257	rbm46	95	57.859	Fundulus_heteroclitus
ENSCLAG00000011886	-	92	77.004	ENSGALG00000009278	RBM46	100	77.004	Gallus_gallus
ENSCLAG00000011886	-	55	80.139	ENSGAFG00000020245	rbm46	67	80.139	Gambusia_affinis
ENSCLAG00000011886	-	95	86.172	ENSGAGG00000002019	RBM46	95	86.172	Gopherus_agassizii
ENSCLAG00000011886	-	99	90.927	ENSGGOG00000001876	RBM46	99	94.770	Gorilla_gorilla
ENSCLAG00000011886	-	87	60.706	ENSHBUG00000009609	rbm46	91	66.348	Haplochromis_burtoni
ENSCLAG00000011886	-	97	84.722	ENSHGLG00000002463	-	99	92.841	Heterocephalus_glaber_female
ENSCLAG00000011886	-	100	76.908	ENSHGLG00000010742	-	100	76.527	Heterocephalus_glaber_female
ENSCLAG00000011886	-	97	76.023	ENSHGLG00000002940	-	98	76.023	Heterocephalus_glaber_female
ENSCLAG00000011886	-	97	89.784	ENSHGLG00100012752	-	99	92.505	Heterocephalus_glaber_male
ENSCLAG00000011886	-	100	71.970	ENSHGLG00100018987	-	100	71.970	Heterocephalus_glaber_male
ENSCLAG00000011886	-	100	76.908	ENSHGLG00100004977	-	100	76.527	Heterocephalus_glaber_male
ENSCLAG00000011886	-	86	50.877	ENSHCOG00000012998	rbm46	89	50.877	Hippocampus_comes
ENSCLAG00000011886	-	89	67.015	ENSIPUG00000024038	rbm46	96	66.667	Ictalurus_punctatus
ENSCLAG00000011886	-	99	91.892	ENSSTOG00000007918	RBM46	99	95.188	Ictidomys_tridecemlineatus
ENSCLAG00000011886	-	92	93.096	ENSJJAG00000003902	Rbm46	99	93.096	Jaculus_jaculus
ENSCLAG00000011886	-	90	64.271	ENSKMAG00000015127	rbm46	88	63.202	Kryptolebias_marmoratus
ENSCLAG00000011886	-	99	82.205	ENSLACG00000002062	RBM46	97	82.205	Latimeria_chalumnae
ENSCLAG00000011886	-	96	70.775	ENSLOCG00000008298	rbm46	99	73.377	Lepisosteus_oculatus
ENSCLAG00000011886	-	90	94.861	ENSLAFG00000015448	RBM46	99	94.861	Loxodonta_africana
ENSCLAG00000011886	-	92	94.770	ENSMFAG00000043485	RBM46	99	94.770	Macaca_fascicularis
ENSCLAG00000011886	-	92	94.770	ENSMMUG00000021147	RBM46	99	94.770	Macaca_mulatta
ENSCLAG00000011886	-	92	94.770	ENSMNEG00000002787	RBM46	99	94.770	Macaca_nemestrina
ENSCLAG00000011886	-	92	94.142	ENSMLEG00000029756	RBM46	99	94.142	Mandrillus_leucophaeus
ENSCLAG00000011886	-	86	67.338	ENSMAMG00000009093	rbm46	88	66.225	Mastacembelus_armatus
ENSCLAG00000011886	-	93	61.746	ENSMZEG00005027849	rbm46	97	62.658	Maylandia_zebra
ENSCLAG00000011886	-	91	77.825	ENSMGAG00000001457	RBM46	99	77.825	Meleagris_gallopavo
ENSCLAG00000011886	-	99	91.313	ENSMAUG00000009911	Rbm46	99	94.433	Mesocricetus_auratus
ENSCLAG00000011886	-	99	91.120	ENSMICG00000042747	RBM46	99	94.351	Microcebus_murinus
ENSCLAG00000011886	-	99	91.506	ENSMOCG00000001188	Rbm46	99	94.647	Microtus_ochrogaster
ENSCLAG00000011886	-	87	63.537	ENSMMOG00000011214	rbm46	86	63.420	Mola_mola
ENSCLAG00000011886	-	91	93.617	ENSMODG00000001302	RBM46	81	93.617	Monodelphis_domestica
ENSCLAG00000011886	-	86	63.170	ENSMALG00000006185	rbm46	94	62.946	Monopterus_albus
ENSCLAG00000011886	-	99	90.734	MGP_CAROLIEiJ_G0025101	Rbm46	99	94.647	Mus_caroli
ENSCLAG00000011886	-	99	90.541	ENSMUSG00000033882	Rbm46	99	94.218	Mus_musculus
ENSCLAG00000011886	-	99	91.120	MGP_PahariEiJ_G0026544	Rbm46	99	94.433	Mus_pahari
ENSCLAG00000011886	-	99	90.347	MGP_SPRETEiJ_G0026043	Rbm46	99	94.004	Mus_spretus
ENSCLAG00000011886	-	92	95.188	ENSMPUG00000005670	RBM46	99	95.188	Mustela_putorius_furo
ENSCLAG00000011886	-	99	90.559	ENSMLUG00000003221	RBM46	97	90.559	Myotis_lucifugus
ENSCLAG00000011886	-	99	89.961	ENSNGAG00000004231	Rbm46	99	94.004	Nannospalax_galili
ENSCLAG00000011886	-	87	64.459	ENSNBRG00000000273	rbm46	85	64.459	Neolamprologus_brichardi
ENSCLAG00000011886	-	92	94.561	ENSNLEG00000006184	RBM46	99	94.561	Nomascus_leucogenys
ENSCLAG00000011886	-	80	94.231	ENSMEUG00000013328	RBM46	99	94.146	Notamacropus_eugenii
ENSCLAG00000011886	-	55	96.113	ENSOPRG00000007136	RBM46	100	96.113	Ochotona_princeps
ENSCLAG00000011886	-	99	88.610	ENSODEG00000000735	-	99	93.096	Octodon_degus
ENSCLAG00000011886	-	99	91.585	ENSODEG00000018002	-	96	91.585	Octodon_degus
ENSCLAG00000011886	-	86	66.000	ENSONIG00000014096	rbm46	96	66.000	Oreochromis_niloticus
ENSCLAG00000011886	-	93	84.855	ENSOANG00000002141	RBM46	97	86.047	Ornithorhynchus_anatinus
ENSCLAG00000011886	-	99	91.699	ENSOCUG00000017859	RBM46	97	91.699	Oryctolagus_cuniculus
ENSCLAG00000011886	-	90	61.603	ENSORLG00000002429	rbm46	91	61.874	Oryzias_latipes
ENSCLAG00000011886	-	90	62.025	ENSORLG00020022154	rbm46	85	62.025	Oryzias_latipes_hni
ENSCLAG00000011886	-	90	61.945	ENSORLG00015020234	rbm46	94	62.288	Oryzias_latipes_hsok
ENSCLAG00000011886	-	86	62.306	ENSOMEG00000022580	rbm46	86	61.894	Oryzias_melastigma
ENSCLAG00000011886	-	99	91.699	ENSOGAG00000005647	RBM46	97	91.699	Otolemur_garnettii
ENSCLAG00000011886	-	99	90.541	ENSOARG00000016406	RBM46	99	93.933	Ovis_aries
ENSCLAG00000011886	-	92	94.770	ENSPPAG00000043236	RBM46	99	94.770	Pan_paniscus
ENSCLAG00000011886	-	99	91.120	ENSPPRG00000009416	RBM46	99	94.433	Panthera_pardus
ENSCLAG00000011886	-	99	91.120	ENSPTIG00000017449	RBM46	99	94.433	Panthera_tigris_altaica
ENSCLAG00000011886	-	92	94.770	ENSPTRG00000016538	RBM46	99	94.770	Pan_troglodytes
ENSCLAG00000011886	-	99	91.313	ENSPANG00000004186	RBM46	99	94.770	Papio_anubis
ENSCLAG00000011886	-	95	66.869	ENSPKIG00000015334	rbm46	86	66.869	Paramormyrops_kingsleyae
ENSCLAG00000011886	-	93	89.583	ENSPSIG00000006429	RBM46	98	89.583	Pelodiscus_sinensis
ENSCLAG00000011886	-	86	80.812	ENSPMGG00000019872	rbm46	92	61.211	Periophthalmus_magnuspinnatus
ENSCLAG00000011886	-	99	91.313	ENSPEMG00000013899	Rbm46	99	94.433	Peromyscus_maniculatus_bairdii
ENSCLAG00000011886	-	99	90.541	ENSPCIG00000029626	RBM46	99	93.933	Phascolarctos_cinereus
ENSCLAG00000011886	-	77	78.644	ENSPFOG00000001079	rbm46	73	78.644	Poecilia_formosa
ENSCLAG00000011886	-	90	62.319	ENSPLAG00000004541	rbm46	83	62.448	Poecilia_latipinna
ENSCLAG00000011886	-	90	62.319	ENSPMEG00000015724	rbm46	92	64.901	Poecilia_mexicana
ENSCLAG00000011886	-	87	65.351	ENSPREG00000014464	rbm46	95	65.351	Poecilia_reticulata
ENSCLAG00000011886	-	99	90.927	ENSPPYG00000015144	RBM46	97	90.927	Pongo_abelii
ENSCLAG00000011886	-	99	83.784	ENSPCAG00000003110	RBM46	97	84.749	Procavia_capensis
ENSCLAG00000011886	-	99	89.961	ENSPCOG00000024347	RBM46	99	93.515	Propithecus_coquereli
ENSCLAG00000011886	-	99	91.313	ENSPVAG00000008376	RBM46	97	91.313	Pteropus_vampyrus
ENSCLAG00000011886	-	94	65.594	ENSPNAG00000025312	rbm46	95	65.594	Pygocentrus_nattereri
ENSCLAG00000011886	-	99	91.313	ENSRNOG00000025823	Rbm46	97	91.313	Rattus_norvegicus
ENSCLAG00000011886	-	92	93.724	ENSRBIG00000032583	RBM46	99	93.790	Rhinopithecus_bieti
ENSCLAG00000011886	-	92	93.515	ENSRROG00000044288	RBM46	99	93.576	Rhinopithecus_roxellana
ENSCLAG00000011886	-	99	90.927	ENSSBOG00000033028	RBM46	99	94.770	Saimiri_boliviensis_boliviensis
ENSCLAG00000011886	-	99	90.734	ENSSHAG00000012596	RBM46	97	90.734	Sarcophilus_harrisii
ENSCLAG00000011886	-	95	68.699	ENSSFOG00015000087	rbm46	95	67.063	Scleropages_formosus
ENSCLAG00000011886	-	88	63.077	ENSSMAG00000017042	rbm46	95	63.077	Scophthalmus_maximus
ENSCLAG00000011886	-	86	67.406	ENSSDUG00000020645	rbm46	86	67.627	Seriola_dumerili
ENSCLAG00000011886	-	99	91.313	ENSSARG00000006520	RBM46	97	91.313	Sorex_araneus
ENSCLAG00000011886	-	99	86.731	ENSSPUG00000012525	-	97	86.538	Sphenodon_punctatus
ENSCLAG00000011886	-	93	86.902	ENSSPUG00000004773	-	100	86.902	Sphenodon_punctatus
ENSCLAG00000011886	-	87	62.832	ENSSPAG00000013697	rbm46	94	62.832	Stegastes_partitus
ENSCLAG00000011886	-	92	94.770	ENSSSCG00000008994	RBM46	99	94.770	Sus_scrofa
ENSCLAG00000011886	-	90	82.013	ENSTGUG00000005307	RBM46	100	82.013	Taeniopygia_guttata
ENSCLAG00000011886	-	88	63.020	ENSTRUG00000004237	rbm46	91	63.020	Takifugu_rubripes
ENSCLAG00000011886	-	88	61.373	ENSTNIG00000008714	rbm46	85	61.373	Tetraodon_nigroviridis
ENSCLAG00000011886	-	99	87.259	ENSTBEG00000013949	RBM46	97	87.259	Tupaia_belangeri
ENSCLAG00000011886	-	99	89.382	ENSTTRG00000001239	RBM46	97	89.382	Tursiops_truncatus
ENSCLAG00000011886	-	99	91.506	ENSUAMG00000026593	RBM46	99	95.188	Ursus_americanus
ENSCLAG00000011886	-	99	91.313	ENSUMAG00000016442	RBM46	99	94.979	Ursus_maritimus
ENSCLAG00000011886	-	99	91.699	ENSVVUG00000024957	RBM46	99	95.188	Vulpes_vulpes
ENSCLAG00000011886	-	99	55.086	ENSXETG00000032344	-	97	55.086	Xenopus_tropicalis
ENSCLAG00000011886	-	99	73.643	ENSXETG00000022412	-	96	73.643	Xenopus_tropicalis
ENSCLAG00000011886	-	71	72.358	ENSXETG00000032067	-	100	71.816	Xenopus_tropicalis
ENSCLAG00000011886	-	87	64.086	ENSXMAG00000008237	rbm46	90	64.086	Xiphophorus_maculatus