EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCLAG00000011892 (Gene tree)
Gene ID: 102019197
Gene Symbol: PUM3
Alias: HA-8|KIAA0020|PEN|PUF6|XTP5|hPUF-A
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Chinchilla_lanigera
Status: putative
Strand: Minus strand
Length: 46767 bases
Position: chrJH721894.1:7198558-7245324
Accession: 102019197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCLAP00000017318	CPL	PF08144.11	1.9e-53	1	1
ENSCLAP00000017319	CPL	PF08144.11	1.9e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCLAT00000017487	PUM3-201	6890	-	ENSCLAP00000017318	648 (aa)	-	UPI00038EABE1
ENSCLAT00000017488	PUM3-202	2406	XM_005388614	ENSCLAP00000017319	648 (aa)	XP_005388671	UPI00038EABE1

Gene Model

Click here to download ENSCLAG00000011892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000011892's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCLAG00000011892	PUM3	99	90.741	ENSG00000080608	PUM3	100	90.741	Homo_sapiens
ENSCLAG00000011892	PUM3	82	60.935	ENSAPOG00000020252	pum3	98	55.047	Acanthochromis_polyacanthus
ENSCLAG00000011892	PUM3	99	90.263	ENSAMEG00000012187	PUM3	100	90.263	Ailuropoda_melanoleuca
ENSCLAG00000011892	PUM3	86	56.328	ENSACIG00000009786	pum3	88	57.467	Amphilophus_citrinellus
ENSCLAG00000011892	PUM3	89	57.692	ENSAOCG00000004439	pum3	98	55.678	Amphiprion_ocellaris
ENSCLAG00000011892	PUM3	89	57.692	ENSAPEG00000020523	pum3	98	55.678	Amphiprion_percula
ENSCLAG00000011892	PUM3	82	62.991	ENSATEG00000005799	pum3	82	62.998	Anabas_testudineus
ENSCLAG00000011892	PUM3	96	74.759	ENSAPLG00000002920	PUM3	100	74.759	Anas_platyrhynchos
ENSCLAG00000011892	PUM3	93	71.642	ENSACAG00000003174	PUM3	99	71.761	Anolis_carolinensis
ENSCLAG00000011892	PUM3	99	90.881	ENSANAG00000024520	PUM3	100	90.881	Aotus_nancymaae
ENSCLAG00000011892	PUM3	96	55.692	ENSACLG00000001017	pum3	87	56.672	Astatotilapia_calliptera
ENSCLAG00000011892	PUM3	92	66.164	ENSAMXG00000020911	pum3	93	66.164	Astyanax_mexicanus
ENSCLAG00000011892	PUM3	99	90.572	ENSBTAG00000013357	PUM3	100	90.572	Bos_taurus
ENSCLAG00000011892	PUM3	75	32.998	WBGene00014165	puf-12	64	32.998	Caenorhabditis_elegans
ENSCLAG00000011892	PUM3	99	89.026	ENSCJAG00000010917	PUM3	100	89.026	Callithrix_jacchus
ENSCLAG00000011892	PUM3	100	89.815	ENSCAFG00000002035	PUM3	100	89.815	Canis_familiaris
ENSCLAG00000011892	PUM3	100	89.660	ENSCAFG00020026867	PUM3	100	89.660	Canis_lupus_dingo
ENSCLAG00000011892	PUM3	99	89.954	ENSCHIG00000021559	PUM3	100	89.954	Capra_hircus
ENSCLAG00000011892	PUM3	99	90.108	ENSTSYG00000007481	PUM3	100	90.108	Carlito_syrichta
ENSCLAG00000011892	PUM3	100	89.831	ENSCAPG00000010592	-	100	89.831	Cavia_aperea
ENSCLAG00000011892	PUM3	100	91.204	ENSCPOG00000008552	-	100	91.204	Cavia_porcellus
ENSCLAG00000011892	PUM3	99	89.645	ENSCCAG00000032650	PUM3	100	89.645	Cebus_capucinus
ENSCLAG00000011892	PUM3	99	91.499	ENSCATG00000024880	PUM3	100	91.499	Cercocebus_atys
ENSCLAG00000011892	PUM3	99	91.654	ENSCSAG00000008691	PUM3	100	91.654	Chlorocebus_sabaeus
ENSCLAG00000011892	PUM3	100	69.290	ENSCHOG00000002535	PUM3	95	69.290	Choloepus_hoffmanni
ENSCLAG00000011892	PUM3	99	72.643	ENSCPBG00000025470	PUM3	95	72.643	Chrysemys_picta_bellii
ENSCLAG00000011892	PUM3	81	40.219	ENSCING00000024199	-	87	40.733	Ciona_intestinalis
ENSCLAG00000011892	PUM3	90	39.933	ENSCSAVG00000006072	-	99	41.143	Ciona_savignyi
ENSCLAG00000011892	PUM3	99	91.345	ENSCANG00000006142	PUM3	100	91.345	Colobus_angolensis_palliatus
ENSCLAG00000011892	PUM3	100	89.506	ENSCGRG00001016402	Pum3	100	89.506	Cricetulus_griseus_chok1gshd
ENSCLAG00000011892	PUM3	100	89.506	ENSCGRG00000010207	Pum3	100	89.506	Cricetulus_griseus_crigri
ENSCLAG00000011892	PUM3	89	56.432	ENSCSEG00000001565	pum3	99	56.463	Cynoglossus_semilaevis
ENSCLAG00000011892	PUM3	61	53.333	ENSCVAG00000006550	pum3	98	53.676	Cyprinodon_variegatus
ENSCLAG00000011892	PUM3	93	67.690	ENSDARG00000087779	pum3	98	66.882	Danio_rerio
ENSCLAG00000011892	PUM3	100	77.112	ENSDNOG00000008157	PUM3	70	77.504	Dasypus_novemcinctus
ENSCLAG00000011892	PUM3	81	83.491	ENSETEG00000015331	PUM3	81	83.491	Echinops_telfairi
ENSCLAG00000011892	PUM3	80	40.649	ENSEBUG00000011586	pum3	75	41.386	Eptatretus_burgeri
ENSCLAG00000011892	PUM3	99	91.345	ENSEASG00005010350	PUM3	100	91.345	Equus_asinus_asinus
ENSCLAG00000011892	PUM3	99	91.345	ENSECAG00000017193	PUM3	100	91.345	Equus_caballus
ENSCLAG00000011892	PUM3	93	80.431	ENSEEUG00000010314	PUM3	100	80.431	Erinaceus_europaeus
ENSCLAG00000011892	PUM3	95	63.023	ENSELUG00000002215	pum3	96	63.023	Esox_lucius
ENSCLAG00000011892	PUM3	99	72.393	ENSFALG00000010509	PUM3	100	70.642	Ficedula_albicollis
ENSCLAG00000011892	PUM3	100	93.827	ENSFDAG00000021027	PUM3	100	93.827	Fukomys_damarensis
ENSCLAG00000011892	PUM3	88	59.948	ENSFHEG00000015576	pum3	99	59.948	Fundulus_heteroclitus
ENSCLAG00000011892	PUM3	83	61.007	ENSGMOG00000014217	pum3	97	60.994	Gadus_morhua
ENSCLAG00000011892	PUM3	99	71.275	ENSGALG00000010178	PUM3	100	71.275	Gallus_gallus
ENSCLAG00000011892	PUM3	58	59.474	ENSGAFG00000001930	pum3	65	59.474	Gambusia_affinis
ENSCLAG00000011892	PUM3	82	60.976	ENSGACG00000017878	pum3	96	61.101	Gasterosteus_aculeatus
ENSCLAG00000011892	PUM3	99	72.643	ENSGAGG00000018983	PUM3	99	73.684	Gopherus_agassizii
ENSCLAG00000011892	PUM3	99	91.345	ENSGGOG00000006143	PUM3	100	91.345	Gorilla_gorilla
ENSCLAG00000011892	PUM3	99	50.307	ENSHBUG00000012903	pum3	99	48.710	Haplochromis_burtoni
ENSCLAG00000011892	PUM3	100	94.290	ENSHGLG00000015868	-	100	94.290	Heterocephalus_glaber_female
ENSCLAG00000011892	PUM3	100	94.290	ENSHGLG00100018825	PUM3	100	94.436	Heterocephalus_glaber_male
ENSCLAG00000011892	PUM3	91	59.008	ENSHCOG00000010306	pum3	89	55.418	Hippocampus_comes
ENSCLAG00000011892	PUM3	87	68.496	ENSIPUG00000024801	pum3	97	65.466	Ictalurus_punctatus
ENSCLAG00000011892	PUM3	100	91.204	ENSSTOG00000009586	PUM3	100	91.204	Ictidomys_tridecemlineatus
ENSCLAG00000011892	PUM3	99	86.862	ENSJJAG00000012563	Pum3	99	86.862	Jaculus_jaculus
ENSCLAG00000011892	PUM3	91	58.124	ENSKMAG00000010277	pum3	92	55.031	Kryptolebias_marmoratus
ENSCLAG00000011892	PUM3	93	57.166	ENSLBEG00000012213	pum3	93	55.680	Labrus_bergylta
ENSCLAG00000011892	PUM3	99	66.769	ENSLACG00000008312	PUM3	100	66.769	Latimeria_chalumnae
ENSCLAG00000011892	PUM3	99	65.688	ENSLOCG00000012529	pum3	99	65.688	Lepisosteus_oculatus
ENSCLAG00000011892	PUM3	99	88.854	ENSLAFG00000017341	PUM3	99	88.854	Loxodonta_africana
ENSCLAG00000011892	PUM3	99	91.654	ENSMFAG00000001430	PUM3	100	91.654	Macaca_fascicularis
ENSCLAG00000011892	PUM3	99	91.654	ENSMMUG00000002362	PUM3	99	91.654	Macaca_mulatta
ENSCLAG00000011892	PUM3	99	91.654	ENSMNEG00000035288	PUM3	100	91.654	Macaca_nemestrina
ENSCLAG00000011892	PUM3	99	91.963	ENSMLEG00000034820	PUM3	100	91.963	Mandrillus_leucophaeus
ENSCLAG00000011892	PUM3	82	62.172	ENSMAMG00000022861	pum3	97	54.683	Mastacembelus_armatus
ENSCLAG00000011892	PUM3	94	56.918	ENSMZEG00005014205	pum3	95	54.812	Maylandia_zebra
ENSCLAG00000011892	PUM3	99	64.526	ENSMGAG00000002255	PUM3	99	65.565	Meleagris_gallopavo
ENSCLAG00000011892	PUM3	100	89.352	ENSMAUG00000009733	Pum3	100	89.352	Mesocricetus_auratus
ENSCLAG00000011892	PUM3	99	90.881	ENSMICG00000045916	PUM3	87	90.881	Microcebus_murinus
ENSCLAG00000011892	PUM3	99	85.162	ENSMOCG00000014830	-	100	84.235	Microtus_ochrogaster
ENSCLAG00000011892	PUM3	100	89.506	ENSMOCG00000019519	-	100	89.506	Microtus_ochrogaster
ENSCLAG00000011892	PUM3	92	53.734	ENSMMOG00000012184	pum3	99	53.084	Mola_mola
ENSCLAG00000011892	PUM3	99	68.567	ENSMODG00000015417	PUM3	93	77.052	Monodelphis_domestica
ENSCLAG00000011892	PUM3	82	60.935	ENSMALG00000022164	pum3	93	54.230	Monopterus_albus
ENSCLAG00000011892	PUM3	100	88.889	MGP_CAROLIEiJ_G0022845	Pum3	100	88.889	Mus_caroli
ENSCLAG00000011892	PUM3	100	89.043	ENSMUSG00000041360	Pum3	100	89.043	Mus_musculus
ENSCLAG00000011892	PUM3	99	89.181	MGP_PahariEiJ_G0014338	Pum3	99	89.181	Mus_pahari
ENSCLAG00000011892	PUM3	100	89.043	MGP_SPRETEiJ_G0023763	Pum3	100	89.043	Mus_spretus
ENSCLAG00000011892	PUM3	99	87.481	ENSMPUG00000005125	PUM3	100	87.481	Mustela_putorius_furo
ENSCLAG00000011892	PUM3	99	89.474	ENSMLUG00000002309	PUM3	99	89.474	Myotis_lucifugus
ENSCLAG00000011892	PUM3	99	86.903	ENSNGAG00000019468	Pum3	100	86.903	Nannospalax_galili
ENSCLAG00000011892	PUM3	93	55.410	ENSNBRG00000021370	pum3	95	54.590	Neolamprologus_brichardi
ENSCLAG00000011892	PUM3	99	91.190	ENSNLEG00000008712	PUM3	100	91.190	Nomascus_leucogenys
ENSCLAG00000011892	PUM3	75	59.754	ENSMEUG00000013606	-	96	58.058	Notamacropus_eugenii
ENSCLAG00000011892	PUM3	79	77.186	ENSOPRG00000004225	-	79	77.186	Ochotona_princeps
ENSCLAG00000011892	PUM3	100	93.827	ENSODEG00000003625	-	100	93.827	Octodon_degus
ENSCLAG00000011892	PUM3	99	88.000	ENSODEG00000016477	-	100	88.000	Octodon_degus
ENSCLAG00000011892	PUM3	96	56.180	ENSONIG00000012733	pum3	81	61.290	Oreochromis_niloticus
ENSCLAG00000011892	PUM3	81	78.598	ENSOANG00000014995	PUM3	97	78.598	Ornithorhynchus_anatinus
ENSCLAG00000011892	PUM3	99	88.975	ENSOCUG00000026104	-	100	88.975	Oryctolagus_cuniculus
ENSCLAG00000011892	PUM3	99	89.799	ENSOCUG00000004189	-	100	89.799	Oryctolagus_cuniculus
ENSCLAG00000011892	PUM3	92	55.224	ENSORLG00000014935	pum3	99	52.877	Oryzias_latipes
ENSCLAG00000011892	PUM3	89	55.481	ENSORLG00020002841	pum3	99	53.033	Oryzias_latipes_hni
ENSCLAG00000011892	PUM3	99	52.200	ENSORLG00015015906	pum3	99	51.897	Oryzias_latipes_hsok
ENSCLAG00000011892	PUM3	90	55.707	ENSOMEG00000009427	pum3	98	53.736	Oryzias_melastigma
ENSCLAG00000011892	PUM3	99	90.123	ENSOGAG00000008125	-	100	90.123	Otolemur_garnettii
ENSCLAG00000011892	PUM3	99	66.820	ENSOGAG00000033481	-	99	65.802	Otolemur_garnettii
ENSCLAG00000011892	PUM3	99	89.522	ENSOARG00000013337	PUM3	100	89.522	Ovis_aries
ENSCLAG00000011892	PUM3	99	91.204	ENSPPAG00000041337	PUM3	100	91.204	Pan_paniscus
ENSCLAG00000011892	PUM3	99	88.099	ENSPPRG00000000809	PUM3	100	88.099	Panthera_pardus
ENSCLAG00000011892	PUM3	99	88.717	ENSPTIG00000021934	PUM3	100	88.717	Panthera_tigris_altaica
ENSCLAG00000011892	PUM3	99	91.358	ENSPTRG00000020735	PUM3	100	91.358	Pan_troglodytes
ENSCLAG00000011892	PUM3	99	91.808	ENSPANG00000025118	PUM3	100	91.808	Papio_anubis
ENSCLAG00000011892	PUM3	99	63.623	ENSPKIG00000022249	pum3	96	66.057	Paramormyrops_kingsleyae
ENSCLAG00000011892	PUM3	99	72.643	ENSPSIG00000016272	PUM3	100	72.643	Pelodiscus_sinensis
ENSCLAG00000011892	PUM3	76	62.525	ENSPMGG00000021261	pum3	98	62.525	Periophthalmus_magnuspinnatus
ENSCLAG00000011892	PUM3	89	85.849	ENSPEMG00000019340	-	100	85.849	Peromyscus_maniculatus_bairdii
ENSCLAG00000011892	PUM3	99	75.367	ENSPCIG00000030598	PUM3	92	75.367	Phascolarctos_cinereus
ENSCLAG00000011892	PUM3	91	57.191	ENSPFOG00000001719	pum3	94	57.601	Poecilia_formosa
ENSCLAG00000011892	PUM3	91	57.025	ENSPLAG00000020010	pum3	95	56.860	Poecilia_latipinna
ENSCLAG00000011892	PUM3	91	57.285	ENSPMEG00000017451	pum3	95	56.954	Poecilia_mexicana
ENSCLAG00000011892	PUM3	99	91.345	ENSPPYG00000019255	PUM3	100	91.345	Pongo_abelii
ENSCLAG00000011892	PUM3	100	77.006	ENSPCAG00000005797	PUM3	95	77.006	Procavia_capensis
ENSCLAG00000011892	PUM3	99	90.726	ENSPCOG00000027325	PUM3	100	90.726	Propithecus_coquereli
ENSCLAG00000011892	PUM3	100	87.809	ENSPVAG00000016135	PUM3	95	87.809	Pteropus_vampyrus
ENSCLAG00000011892	PUM3	96	56.723	ENSPNYG00000016124	pum3	88	56.672	Pundamilia_nyererei
ENSCLAG00000011892	PUM3	94	65.366	ENSPNAG00000026524	pum3	98	65.366	Pygocentrus_nattereri
ENSCLAG00000011892	PUM3	99	87.172	ENSRNOG00000012574	Pum3	100	87.172	Rattus_norvegicus
ENSCLAG00000011892	PUM3	99	86.862	ENSRNOG00000048356	RGD1308750	100	86.862	Rattus_norvegicus
ENSCLAG00000011892	PUM3	99	91.190	ENSRBIG00000036924	PUM3	100	91.190	Rhinopithecus_bieti
ENSCLAG00000011892	PUM3	99	91.190	ENSRROG00000041089	PUM3	100	91.190	Rhinopithecus_roxellana
ENSCLAG00000011892	PUM3	99	91.190	ENSSBOG00000028066	PUM3	100	91.190	Saimiri_boliviensis_boliviensis
ENSCLAG00000011892	PUM3	99	79.933	ENSSHAG00000003730	PUM3	99	77.538	Sarcophilus_harrisii
ENSCLAG00000011892	PUM3	99	64.253	ENSSFOG00015018778	pum3	98	64.253	Scleropages_formosus
ENSCLAG00000011892	PUM3	82	62.030	ENSSMAG00000013236	pum3	99	55.556	Scophthalmus_maximus
ENSCLAG00000011892	PUM3	98	55.887	ENSSDUG00000001887	pum3	90	55.730	Seriola_dumerili
ENSCLAG00000011892	PUM3	89	58.696	ENSSLDG00000015766	pum3	91	55.086	Seriola_lalandi_dorsalis
ENSCLAG00000011892	PUM3	96	86.591	ENSSARG00000000579	PUM3	100	86.591	Sorex_araneus
ENSCLAG00000011892	PUM3	99	70.015	ENSSPUG00000001707	PUM3	100	70.015	Sphenodon_punctatus
ENSCLAG00000011892	PUM3	82	61.121	ENSSPAG00000003976	pum3	82	61.101	Stegastes_partitus
ENSCLAG00000011892	PUM3	100	89.815	ENSSSCG00000005227	PUM3	100	89.815	Sus_scrofa
ENSCLAG00000011892	PUM3	99	71.870	ENSTGUG00000005339	PUM3	100	70.416	Taeniopygia_guttata
ENSCLAG00000011892	PUM3	95	55.725	ENSTRUG00000004074	pum3	79	62.715	Takifugu_rubripes
ENSCLAG00000011892	PUM3	90	59.760	ENSTNIG00000010325	pum3	97	59.241	Tetraodon_nigroviridis
ENSCLAG00000011892	PUM3	99	63.117	ENSTBEG00000013058	PUM3	100	63.117	Tupaia_belangeri
ENSCLAG00000011892	PUM3	100	81.944	ENSTTRG00000001062	PUM3	96	81.944	Tursiops_truncatus
ENSCLAG00000011892	PUM3	100	81.790	ENSUMAG00000018443	PUM3	99	85.579	Ursus_maritimus
ENSCLAG00000011892	PUM3	100	89.985	ENSVPAG00000010766	PUM3	99	89.985	Vicugna_pacos
ENSCLAG00000011892	PUM3	100	89.815	ENSVVUG00000006527	PUM3	100	89.815	Vulpes_vulpes
ENSCLAG00000011892	PUM3	99	58.806	ENSXETG00000011707	pum3	99	58.806	Xenopus_tropicalis
ENSCLAG00000011892	PUM3	91	54.833	ENSXCOG00000006725	pum3	87	58.015	Xiphophorus_couchianus
ENSCLAG00000011892	PUM3	95	55.309	ENSXMAG00000002926	pum3	82	60.115	Xiphophorus_maculatus