EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCLAG00000011899 (Gene tree)
Gene ID
102023324
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Chinchilla_lanigera
Status
putative
Strand
Minus strand
Length
16222 bases
Position
chrJH721912.1:17084805-17101026
Accession
102023324
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCLAP00000017328PABPPF00658.182.2e-3111
ENSCLAP00000017327PABPPF00658.182.4e-3111
ENSCLAP00000017328RRM_5PF13893.62.5e-0912
ENSCLAP00000017328RRM_5PF13893.62.5e-0922
ENSCLAP00000017327RRM_5PF13893.63.1e-0912
ENSCLAP00000017327RRM_5PF13893.63.1e-0922
ENSCLAP00000017328RRM_1PF00076.222.9e-9214
ENSCLAP00000017328RRM_1PF00076.222.9e-9224
ENSCLAP00000017328RRM_1PF00076.222.9e-9234
ENSCLAP00000017328RRM_1PF00076.222.9e-9244
ENSCLAP00000017327RRM_1PF00076.223.6e-9214
ENSCLAP00000017327RRM_1PF00076.223.6e-9224
ENSCLAP00000017327RRM_1PF00076.223.6e-9234
ENSCLAP00000017327RRM_1PF00076.223.6e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCLAT00000017497PABPC4-2022414-ENSCLAP00000017328631 (aa)-UPI00038E955A
ENSCLAT00000017496PABPC4-2012501XM_005395243ENSCLAP00000017327660 (aa)XP_005395300UPI00038E9D79
Gene Model
Click here to download ENSCLAG00000011899's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCLAG00000011899's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCLAG00000011899PABPC45867.978ENSCLAG00000000647PABPC59667.769
ENSCLAG00000011899PABPC49762.639ENSCLAG00000005298PABPC1L9964.469
ENSCLAG00000011899PABPC45930.625ENSCLAG00000005476ELAVL49030.625
ENSCLAG00000011899PABPC45874.619ENSCLAG00000017412-9974.619
ENSCLAG00000011899PABPC45431.646ENSCLAG00000015132HNRNPA05332.450
ENSCLAG00000011899PABPC45834.940ENSCLAG00000003388ELAVL28634.940
ENSCLAG00000011899PABPC46073.003ENSCLAG00000017628PABPC4L9972.603
ENSCLAG00000011899PABPC45837.500ENSCLAG00000010311CELF26137.500
ENSCLAG00000011899PABPC45730.370ENSCLAG00000009857TIA18530.189
ENSCLAG00000011899PABPC45874.619ENSCLAG00000017409-9974.619
ENSCLAG00000011899PABPC45730.769ENSCLAG00000001273TIAL17930.682
ENSCLAG00000011899PABPC49876.736ENSCLAG00000009676PABPC19976.696
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCLAG00000011899PABPC410099.091ENSG00000090621PABPC4100100.000Homo_sapiens
ENSCLAG00000011899PABPC49983.360ENSAPOG00000001161pabpc410082.609Acanthochromis_polyacanthus
ENSCLAG00000011899PABPC410098.788ENSAMEG00000011535-10098.788Ailuropoda_melanoleuca
ENSCLAG00000011899PABPC49857.235ENSAMEG00000015083-9956.913Ailuropoda_melanoleuca
ENSCLAG00000011899PABPC410083.594ENSACIG00000023343pabpc410082.462Amphilophus_citrinellus
ENSCLAG00000011899PABPC49983.360ENSAOCG00000021529pabpc410090.807Amphiprion_ocellaris
ENSCLAG00000011899PABPC49983.360ENSAPEG00000019196pabpc410082.636Amphiprion_percula
ENSCLAG00000011899PABPC49982.911ENSATEG00000007402pabpc410082.016Anabas_testudineus
ENSCLAG00000011899PABPC49991.111ENSAPLG00000009729-10091.111Anas_platyrhynchos
ENSCLAG00000011899PABPC49990.161ENSACAG00000002544PABPC410090.161Anolis_carolinensis
ENSCLAG00000011899PABPC410098.939ENSANAG00000025079PABPC410098.939Aotus_nancymaae
ENSCLAG00000011899PABPC410083.281ENSACLG00000019558pabpc410082.946Astatotilapia_calliptera
ENSCLAG00000011899PABPC49979.239ENSAMXG00000018779pabpc49980.032Astyanax_mexicanus
ENSCLAG00000011899PABPC45786.826ENSBTAG00000048536-9886.826Bos_taurus
ENSCLAG00000011899PABPC410096.218ENSBTAG00000017125PABPC410096.218Bos_taurus
ENSCLAG00000011899PABPC410098.788ENSCJAG00000002512-10098.788Callithrix_jacchus
ENSCLAG00000011899PABPC47788.889ENSCJAG00000045953-9288.889Callithrix_jacchus
ENSCLAG00000011899PABPC410099.049ENSCAFG00000003081PABPC410099.049Canis_familiaris
ENSCLAG00000011899PABPC410098.939ENSCAFG00020004161PABPC410098.939Canis_lupus_dingo
ENSCLAG00000011899PABPC410098.636ENSCHIG00000019398-10098.636Capra_hircus
ENSCLAG00000011899PABPC410076.364ENSCHIG00000023385-10076.364Capra_hircus
ENSCLAG00000011899PABPC410099.091ENSTSYG00000006532PABPC410099.091Carlito_syrichta
ENSCLAG00000011899PABPC49999.088ENSCAPG00000015984PABPC410099.088Cavia_aperea
ENSCLAG00000011899PABPC410099.091ENSCPOG00000009552PABPC410099.091Cavia_porcellus
ENSCLAG00000011899PABPC410098.939ENSCCAG00000037306PABPC410098.939Cebus_capucinus
ENSCLAG00000011899PABPC410099.242ENSCATG00000042164PABPC410099.242Cercocebus_atys
ENSCLAG00000011899PABPC410099.242ENSCSAG00000001135PABPC410099.242Chlorocebus_sabaeus
ENSCLAG00000011899PABPC48697.889ENSCHOG00000005327PABPC48197.889Choloepus_hoffmanni
ENSCLAG00000011899PABPC49991.429ENSCPBG00000001038PABPC410091.429Chrysemys_picta_bellii
ENSCLAG00000011899PABPC49999.078ENSCANG00000034177PABPC410099.078Colobus_angolensis_palliatus
ENSCLAG00000011899PABPC410097.440ENSCGRG00001018166Pabpc410097.440Cricetulus_griseus_chok1gshd
ENSCLAG00000011899PABPC49994.962ENSCGRG00000009777Pabpc410094.962Cricetulus_griseus_crigri
ENSCLAG00000011899PABPC410082.344ENSCSEG00000000130pabpc410082.016Cynoglossus_semilaevis
ENSCLAG00000011899PABPC49983.625ENSCVAG00000019246pabpc410083.596Cyprinodon_variegatus
ENSCLAG00000011899PABPC49985.238ENSDARG00000059259pabpc410085.855Danio_rerio
ENSCLAG00000011899PABPC49999.107ENSDNOG00000018444-10099.107Dasypus_novemcinctus
ENSCLAG00000011899PABPC410096.818ENSDORG00000011581Pabpc410096.818Dipodomys_ordii
ENSCLAG00000011899PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSCLAG00000011899PABPC48665.000ENSETEG00000009172-9965.018Echinops_telfairi
ENSCLAG00000011899PABPC49976.266ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSCLAG00000011899PABPC49776.898ENSEBUG00000013782pabpc49975.949Eptatretus_burgeri
ENSCLAG00000011899PABPC410099.242ENSEASG00005014119PABPC410099.242Equus_asinus_asinus
ENSCLAG00000011899PABPC410099.242ENSECAG00000009396PABPC410099.242Equus_caballus
ENSCLAG00000011899PABPC410096.061ENSEEUG00000002962PABPC410096.061Erinaceus_europaeus
ENSCLAG00000011899PABPC49983.599ENSELUG00000003195pabpc49884.177Esox_lucius
ENSCLAG00000011899PABPC410099.091ENSFCAG00000015254-10099.091Felis_catus
ENSCLAG00000011899PABPC49990.635ENSFALG00000000543PABPC410090.635Ficedula_albicollis
ENSCLAG00000011899PABPC49067.695ENSFDAG00000010581-10063.529Fukomys_damarensis
ENSCLAG00000011899PABPC410099.394ENSFDAG00000020016-10099.394Fukomys_damarensis
ENSCLAG00000011899PABPC410083.412ENSFHEG00000007548pabpc49689.524Fundulus_heteroclitus
ENSCLAG00000011899PABPC49982.808ENSGMOG00000019025pabpc49982.965Gadus_morhua
ENSCLAG00000011899PABPC49991.746ENSGALG00000003800PABPC410091.746Gallus_gallus
ENSCLAG00000011899PABPC49990.566ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSCLAG00000011899PABPC410081.719ENSGACG00000007179pabpc410082.243Gasterosteus_aculeatus
ENSCLAG00000011899PABPC49991.270ENSGAGG00000001888PABPC410091.270Gopherus_agassizii
ENSCLAG00000011899PABPC410099.091ENSGGOG00000004002PABPC410099.091Gorilla_gorilla
ENSCLAG00000011899PABPC410083.438ENSHBUG00000020206pabpc410083.101Haplochromis_burtoni
ENSCLAG00000011899PABPC410099.545ENSHGLG00000011162PABPC410099.545Heterocephalus_glaber_female
ENSCLAG00000011899PABPC410099.525ENSHGLG00100001580PABPC410099.525Heterocephalus_glaber_male
ENSCLAG00000011899PABPC410082.473ENSHCOG00000012694pabpc410081.988Hippocampus_comes
ENSCLAG00000011899PABPC49883.146ENSIPUG00000016620pabpc49980.952Ictalurus_punctatus
ENSCLAG00000011899PABPC410096.970ENSSTOG00000010416PABPC410096.970Ictidomys_tridecemlineatus
ENSCLAG00000011899PABPC410094.697ENSJJAG00000007781Pabpc410094.697Jaculus_jaculus
ENSCLAG00000011899PABPC49991.076ENSKMAG00000013597pabpc49982.344Kryptolebias_marmoratus
ENSCLAG00000011899PABPC410082.426ENSLBEG00000013654pabpc410081.776Labrus_bergylta
ENSCLAG00000011899PABPC49987.855ENSLACG00000011907PABPC410087.855Latimeria_chalumnae
ENSCLAG00000011899PABPC49985.512ENSLOCG00000001877pabpc49986.299Lepisosteus_oculatus
ENSCLAG00000011899PABPC410099.091ENSLAFG00000000151PABPC410099.091Loxodonta_africana
ENSCLAG00000011899PABPC410099.242ENSMFAG00000041481PABPC410099.242Macaca_fascicularis
ENSCLAG00000011899PABPC410099.242ENSMMUG00000007497PABPC410099.242Macaca_mulatta
ENSCLAG00000011899PABPC410099.242ENSMNEG00000043054PABPC410099.242Macaca_nemestrina
ENSCLAG00000011899PABPC410099.242ENSMLEG00000040716PABPC410099.242Mandrillus_leucophaeus
ENSCLAG00000011899PABPC49983.043ENSMAMG00000010025pabpc49982.215Mastacembelus_armatus
ENSCLAG00000011899PABPC410083.125ENSMZEG00005006141pabpc410082.791Maylandia_zebra
ENSCLAG00000011899PABPC49987.564ENSMGAG00000005408PABPC410087.564Meleagris_gallopavo
ENSCLAG00000011899PABPC47794.495ENSMAUG00000019763-8494.495Mesocricetus_auratus
ENSCLAG00000011899PABPC47289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSCLAG00000011899PABPC45781.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSCLAG00000011899PABPC48996.263ENSMICG00000016633-9799.574Microcebus_murinus
ENSCLAG00000011899PABPC49982.593ENSMICG00000036729-10085.435Microcebus_murinus
ENSCLAG00000011899PABPC410097.892ENSMOCG00000006763Pabpc410097.892Microtus_ochrogaster
ENSCLAG00000011899PABPC410080.438ENSMMOG00000002363pabpc49981.476Mola_mola
ENSCLAG00000011899PABPC45974.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSCLAG00000011899PABPC49889.198ENSMODG00000017657-10088.788Monodelphis_domestica
ENSCLAG00000011899PABPC49982.780ENSMALG00000011017pabpc410082.071Monopterus_albus
ENSCLAG00000011899PABPC410097.273MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSCLAG00000011899PABPC49983.559MGP_CAROLIEiJ_G0024864-10083.559Mus_caroli
ENSCLAG00000011899PABPC410097.727ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSCLAG00000011899PABPC49997.696MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSCLAG00000011899PABPC49978.455MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSCLAG00000011899PABPC410099.091ENSMPUG00000014414-10099.091Mustela_putorius_furo
ENSCLAG00000011899PABPC49553.311ENSMPUG00000006836-10052.405Mustela_putorius_furo
ENSCLAG00000011899PABPC410096.197ENSMLUG00000012068PABPC410096.197Myotis_lucifugus
ENSCLAG00000011899PABPC410096.515ENSNGAG00000018292Pabpc410096.515Nannospalax_galili
ENSCLAG00000011899PABPC46786.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSCLAG00000011899PABPC45992.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSCLAG00000011899PABPC410099.208ENSNLEG00000011928PABPC410099.208Nomascus_leucogenys
ENSCLAG00000011899PABPC48598.947ENSOPRG00000011984PABPC48798.947Ochotona_princeps
ENSCLAG00000011899PABPC45385.714ENSODEG00000013457-10085.714Octodon_degus
ENSCLAG00000011899PABPC410099.091ENSODEG00000006592-10099.091Octodon_degus
ENSCLAG00000011899PABPC49989.938ENSODEG00000017434-10090.020Octodon_degus
ENSCLAG00000011899PABPC410083.438ENSONIG00000008176pabpc410082.636Oreochromis_niloticus
ENSCLAG00000011899PABPC49991.111ENSOANG00000010001PABPC410091.111Ornithorhynchus_anatinus
ENSCLAG00000011899PABPC49699.051ENSOCUG00000000562PABPC48899.051Oryctolagus_cuniculus
ENSCLAG00000011899PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSCLAG00000011899PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSCLAG00000011899PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSCLAG00000011899PABPC49983.043ENSOMEG00000014410pabpc49983.542Oryzias_melastigma
ENSCLAG00000011899PABPC410096.531ENSOGAG00000004067PABPC410096.531Otolemur_garnettii
ENSCLAG00000011899PABPC410098.636ENSOARG00000020060PABPC410098.636Ovis_aries
ENSCLAG00000011899PABPC410099.091ENSPPAG00000043625PABPC410099.091Pan_paniscus
ENSCLAG00000011899PABPC410099.091ENSPPRG00000024727PABPC410099.091Panthera_pardus
ENSCLAG00000011899PABPC410099.091ENSPTIG00000005829PABPC410099.091Panthera_tigris_altaica
ENSCLAG00000011899PABPC410099.091ENSPTRG00000000573PABPC410099.091Pan_troglodytes
ENSCLAG00000011899PABPC410099.091ENSPANG00000009484PABPC410099.091Papio_anubis
ENSCLAG00000011899PABPC49984.810ENSPKIG00000025356pabpc49985.443Paramormyrops_kingsleyae
ENSCLAG00000011899PABPC49991.429ENSPSIG00000016892PABPC410091.429Pelodiscus_sinensis
ENSCLAG00000011899PABPC410081.890ENSPMGG00000009073pabpc49981.633Periophthalmus_magnuspinnatus
ENSCLAG00000011899PABPC410097.424ENSPEMG00000023569-9997.424Peromyscus_maniculatus_bairdii
ENSCLAG00000011899PABPC410091.212ENSPEMG00000024193-9991.212Peromyscus_maniculatus_bairdii
ENSCLAG00000011899PABPC48973.310ENSPMAG00000002836pabpc410073.368Petromyzon_marinus
ENSCLAG00000011899PABPC49771.311ENSPMAG00000007885pabpc410070.217Petromyzon_marinus
ENSCLAG00000011899PABPC49794.033ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSCLAG00000011899PABPC410082.786ENSPFOG00000002682pabpc410083.075Poecilia_formosa
ENSCLAG00000011899PABPC410082.629ENSPLAG00000010112pabpc410083.075Poecilia_latipinna
ENSCLAG00000011899PABPC49983.307ENSPMEG00000019739pabpc410083.230Poecilia_mexicana
ENSCLAG00000011899PABPC410083.447ENSPREG00000001589pabpc410083.447Poecilia_reticulata
ENSCLAG00000011899PABPC410099.091ENSPPYG00000001506PABPC410099.091Pongo_abelii
ENSCLAG00000011899PABPC410093.939ENSPCAG00000003341PABPC410093.939Procavia_capensis
ENSCLAG00000011899PABPC410099.244ENSPCOG00000023725-10099.244Propithecus_coquereli
ENSCLAG00000011899PABPC49981.664ENSPCOG00000025882-9593.069Propithecus_coquereli
ENSCLAG00000011899PABPC49998.319ENSPVAG00000002187PABPC410098.319Pteropus_vampyrus
ENSCLAG00000011899PABPC410083.281ENSPNYG00000006134pabpc410082.946Pundamilia_nyererei
ENSCLAG00000011899PABPC410083.568ENSPNAG00000024355pabpc410082.435Pygocentrus_nattereri
ENSCLAG00000011899PABPC410093.333ENSRNOG00000028592AABR07035074.110093.333Rattus_norvegicus
ENSCLAG00000011899PABPC410095.455ENSRNOG00000015642Pabpc410095.455Rattus_norvegicus
ENSCLAG00000011899PABPC410099.242ENSRBIG00000039761PABPC410099.242Rhinopithecus_bieti
ENSCLAG00000011899PABPC410099.242ENSRROG00000033355PABPC410099.242Rhinopithecus_roxellana
ENSCLAG00000011899PABPC410098.788ENSSBOG00000026193PABPC410098.788Saimiri_boliviensis_boliviensis
ENSCLAG00000011899PABPC49892.557ENSSHAG00000018139PABPC410092.063Sarcophilus_harrisii
ENSCLAG00000011899PABPC49985.714ENSSFOG00015023514pabpc49984.628Scleropages_formosus
ENSCLAG00000011899PABPC49982.595ENSSMAG00000009007pabpc49982.261Scophthalmus_maximus
ENSCLAG00000011899PABPC49982.726ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSCLAG00000011899PABPC49982.726ENSSLDG00000013025pabpc49786.087Seriola_lalandi_dorsalis
ENSCLAG00000011899PABPC410091.515ENSSARG00000000310PABPC410091.515Sorex_araneus
ENSCLAG00000011899PABPC49990.000ENSSPUG00000003204PABPC410090.000Sphenodon_punctatus
ENSCLAG00000011899PABPC49990.562ENSSPAG00000009252pabpc410082.171Stegastes_partitus
ENSCLAG00000011899PABPC48950.088ENSSSCG00000036170-9650.000Sus_scrofa
ENSCLAG00000011899PABPC410098.788ENSSSCG00000003660-10098.788Sus_scrofa
ENSCLAG00000011899PABPC49987.292ENSTGUG00000001266PABPC410087.292Taeniopygia_guttata
ENSCLAG00000011899PABPC410081.918ENSTRUG00000005907pabpc49982.316Takifugu_rubripes
ENSCLAG00000011899PABPC410078.056ENSTNIG00000016902pabpc49977.429Tetraodon_nigroviridis
ENSCLAG00000011899PABPC49988.067ENSTBEG00000009035PABPC410088.067Tupaia_belangeri
ENSCLAG00000011899PABPC49983.142ENSTTRG00000014340PABPC410086.891Tursiops_truncatus
ENSCLAG00000011899PABPC410098.891ENSUAMG00000000303PABPC410098.891Ursus_americanus
ENSCLAG00000011899PABPC410098.788ENSUMAG00000019585PABPC410098.788Ursus_maritimus
ENSCLAG00000011899PABPC48495.745ENSVPAG00000010041PABPC47795.745Vicugna_pacos
ENSCLAG00000011899PABPC410099.049ENSVVUG00000005215PABPC410099.049Vulpes_vulpes
ENSCLAG00000011899PABPC49983.333ENSXETG00000010946pabpc410083.333Xenopus_tropicalis
ENSCLAG00000011899PABPC46197.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSCLAG00000011899PABPC49989.351ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSCLAG00000011899PABPC410082.942ENSXMAG00000019007pabpc410082.919Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us